SynTeny Viewer - WheatOmics (MySQL)

SynTeny Viewer — Homoeologous Neighborhood Synteny

Search a gene ID directly from the MySQL BED database, automatically resolve its reference genome, choose upstream/downstream neighbors, and display orthogroup synteny across selected target genomes.

Reference gene ID

Upstream genes

Downstream genes

Available target genomes (click to add)

Loading target genomes...

Selected target genomes (click x or row to remove)

No target genome selected.

Homolog count heatmap No synteny query drawn.

Draw a synteny plot to show homolog counts across selected subgenomes.

Drawn OG / gene table No synteny query drawn.

Draw a synteny plot to show selected genomes, OGs, annotations, and corresponding gene IDs.