WheatOmics 2.0 · Comparative genomics

SynTeny Viewer

Search a gene ID in the MySQL BED index, resolve its reference genome automatically, choose upstream/downstream neighbours, and compare orthogroup synteny across selected target genomes.

MySQL BED index Upstream / downstream windows Homolog-count heatmap SVG / PNG export

Reference gene ID

Upstream genes

Downstream genes

Available target genomes (click to add)

Loading target genomes...

Selected target genomes (click x or row to remove)

No target genome selected.

Homolog count heatmap No synteny query drawn.

Draw a synteny plot to show homolog counts across selected subgenomes.

Drawn OG / gene table No synteny query drawn.

Draw a synteny plot to show selected genomes, OGs, annotations, and corresponding gene IDs.