WheatOmics 2.0 · Interaction atlas
WheatPPI
Search wheat protein-protein interactions from the plant.MAP CF-MS complex map or the PoppIn predicted map, and filter hits by confidence score or supporting edges.
2 interaction datasets
Confidence filters
Bulk gene query
About this data: The protein interaction data was downloaded from
plant.MAP.
We mapped wheat UniProt IDs to IWGSC RefSeq v1.1 annotation.
According to McWhite et.al, CF-MS scores > 0.5 correspond to ~90% true positive rate;
scores > 0.2 correspond to ~50% true positive rate.
Citation:
McWhite, C. D., Papoulas, O., Drew, K., Cox, R. M., June, V., Dong, O. X., Kwon, T., Wan, C., Salmi, M. L., Roux, S. J., Browning, K. S., Chen, Z. J., Ronald, P. C., & Marcotte, E. M. (2020). A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. Cell, S0092-8674(20)30226-9.
https://doi.org/10.1016/j.cell.2020.02.049
McWhite, C. D., Papoulas, O., Drew, K., Cox, R. M., June, V., Dong, O. X., Kwon, T., Wan, C., Salmi, M. L., Roux, S. J., Browning, K. S., Chen, Z. J., Ronald, P. C., & Marcotte, E. M. (2020). A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. Cell, S0092-8674(20)30226-9.
https://doi.org/10.1016/j.cell.2020.02.049
Searching...