all genomes were downloaded from published papers, you can get them from NCBI Assembly database. These published papers were also listed in the webpages of BLAST , GetSequences , PrimerServer and JBrowse.
We downloaded the published transcriptome data from NCBI SRA database and mapped them to genome of cv. Chinese Spring for generating transcripts, and then we used TACO pipeline intergated these transcripts. The result transcript sequences can be download from here (TACOv1.tar.gz) with password 1q6k.
You can get detail information from "About this track" of JBrowse. You can contact us (shengweima@icloud.com) when you have a problem about the JBrowse data.
The order information of EMS mutants ('Jimai22' and 'Cadenza_Kronos') can also be get by right clicking the mutation.
The co-expression tables(wheat grain and wheat multiple tissues) can be downloaded from here with password wuw3.
The genotype data can be downloaded from here with password vn7m.