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Nucleotide Sequence (58 letters)

Query number:1
Query ID:Query_1
Definition line:No definition line
Length:58
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Jagger.genome

Graphic Summary

Distribution of 1 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
6
12
18
24
30
36
42
48
54
58

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
101.4 885.3 100% 2.235e-19 100% chr6D_Jagger
101.4 570.7 100% 2.235e-19 100% chr6B_Jagger
101.4 888.0 103% 2.235e-19 100% chr6A_Jagger
101.4 1252.3 100% 2.235e-19 100% chr5D_Jagger
101.4 904.2 100% 2.235e-19 100% chr5B_Jagger
101.4 804.4 100% 2.235e-19 100% chr4D_Jagger
101.4 797.7 102% 2.235e-19 100% chr4A_Jagger
101.4 722.0 100% 2.235e-19 100% chr2B_Jagger
101.4 1309.1 100% 2.235e-19 100% chr2A_Jagger
98.7 424.9 100% 7.802e-19 100% chr3B_Jagger
96.9 1012.3 100% 2.723e-18 100% chr7A_Jagger
96.9 1131.4 100% 2.723e-18 100% chr3D_Jagger
96.9 651.4 100% 2.723e-18 100% chr1A_Jagger
92.4 522.6 100% 1.158e-16 100% chrUn_Jagger
92.4 1127.8 100% 1.158e-16 100% chr7D_Jagger
83.3 520.8 100% 5.998e-14 100% chr1B_Jagger
57.2 333.1 97% 2.389e-06 100% chr7B_Jagger
38.3 365.4 52% 2.237 100% chr4B_Jagger
37.4 682.7 57% 2.237 100% chr2D_Jagger
35.6 782.1 41% 7.809 100% chr5A_Jagger
35.6 711.0 69% 7.809 100% chr3A_Jagger
35.6 1066.5 64% 7.809 100% chr1D_Jagger

Alignments

Jagger chromosome chr6D

Sequence ID: chr6D_Jagger Length: 459355444 Number of Matches: 23

Range 1: 63281353 to 63281296 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject    63281353  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  63281296

Range 2: 123501369 to 123501345 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 23/25(92%) 0/25(0%) +1/-1
Query            20  CTGAATATGCTTTAGTTATATATAG  44
                     || || |||||||||||||||||||
Subject   123501369  CTAAAAATGCTTTAGTTATATATAG  123501345

Range 3: 10629463 to 10629445 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    10629463  TTAGTTATATATAGAAATG  10629445

Range 4: 12258195 to 12258213 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    12258195  TTAGTTATATATAGAAATG  12258213

Range 5: 23185712 to 23185730 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    23185712  TTAGTTATATATAGAAATG  23185730

Range 6: 58817549 to 58817531 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    58817549  TTAGTTATATATAGAAATG  58817531

Range 7: 60292966 to 60292984 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    60292966  ATGCTTTAGTTATATATAG  60292984

Range 8: 98244797 to 98244779 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    98244797  ATGCTTTAGTTATATATAG  98244779

Range 9: 136645948 to 136645930 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   136645948  TTAGTTATATATAGAAATG  136645930

Range 10: 140472140 to 140472122 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   140472140  ATGCTTTAGTTATATATAG  140472122

Range 11: 159599293 to 159599311 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   159599293  ATGCTTTAGTTATATATAG  159599311

Range 12: 160087166 to 160087148 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   160087166  ATGCTTTAGTTATATATAG  160087148

Range 13: 167207482 to 167207500 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   167207482  ATGCTTTAGTTATATATAG  167207500

Range 14: 177136457 to 177136439 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   177136457  ATGCTTTAGTTATATATAG  177136439

Range 15: 207820648 to 207820630 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   207820648  TTAGTTATATATAGAAATG  207820630

Range 16: 217982346 to 217982328 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   217982346  ATGCTTTAGTTATATATAG  217982328

Range 17: 237455733 to 237455715 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   237455733  TTAGTTATATATAGAAATG  237455715

Range 18: 353215706 to 353215724 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   353215706  TTAGTTATATATAGAAATG  353215724

Range 19: 377800495 to 377800477 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   377800495  TTAGTTATATATAGAAATG  377800477

Range 20: 401038188 to 401038170 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   401038188  TTAGTTATATATAGAAATG  401038170

Range 21: 406535523 to 406535541 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   406535523  TTAGTTATATATAGAAATG  406535541

Range 22: 435754875 to 435754893 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   435754875  TTAGTTATATATAGAAATG  435754893

Range 23: 445451460 to 445451442 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   445451460  TTAGTTATATATAGAAATG  445451442

Jagger chromosome chr6B

Sequence ID: chr6B_Jagger Length: 721110502 Number of Matches: 14

Range 1: 40509777 to 40509834 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject    40509777  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  40509834

Range 2: 44320567 to 44320592 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
39.2 bits(42) 0.6 24/26(92%) 0/26(0%) +1/+1
Query            32  TAGTTATATATAGAAATGATGTGCCT  57
                     |||||||||||||| || ||||||||
Subject    44320567  TAGTTATATATAGATATAATGTGCCT  44320592

Range 3: 109417121 to 109417102 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   109417121  TTTAGTTATATATAGAAATG  109417102

Range 4: 418764775 to 418764804 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 26/30(87%) 0/30(0%) +1/+1
Query            20  CTGAATATGCTTTAGTTATATATAGAAATG  49
                     || ||||||||||||||| ||| | |||||
Subject   418764775  CTAAATATGCTTTAGTTAGATAAAAAAATG  418764804

Range 5: 10399989 to 10399971 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            30  TTTAGTTATATATAGAAAT  48
                     |||||||||||||||||||
Subject    10399989  TTTAGTTATATATAGAAAT  10399971

Range 6: 26112670 to 26112688 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    26112670  TTAGTTATATATAGAAATG  26112688

Range 7: 35574329 to 35574347 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    35574329  TTAGTTATATATAGAAATG  35574347

Range 8: 109417063 to 109417045 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   109417063  TTAGTTATATATAGAAATG  109417045

Range 9: 354801411 to 354801439 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 25/29(86%) 0/29(0%) +1/+1
Query            22  GAATATGCTTTAGTTATATATAGAAATGA  50
                     ||||||||||||| ||||| | | |||||
Subject   354801411  GAATATGCTTTAGGTATATGTTGTAATGA  354801439

Range 10: 365879957 to 365879939 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   365879957  ATGCTTTAGTTATATATAG  365879939

Range 11: 374996400 to 374996418 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   374996400  ATGCTTTAGTTATATATAG  374996418

Range 12: 403972360 to 403972342 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   403972360  ATGCTTTAGTTATATATAG  403972342

Range 13: 405322402 to 405322420 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   405322402  ATGCTTTAGTTATATATAG  405322420

Range 14: 636266363 to 636266381 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   636266363  TTAGTTATATATAGAAATG  636266381

Jagger chromosome chr6A

Sequence ID: chr6A_Jagger Length: 625793224 Number of Matches: 23

Range 1: 4909177 to 4909120 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject     4909177  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  4909120

Range 2: 304958485 to 304958514 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 27/30(90%) 1/30(3%) +1/+1
Query            26  ATGCTTTAGTTATAT-ATAGAAATGATGTG  55
                     ||||||||||||||| || ||| |||||||
Subject   304958485  ATGCTTTAGTTATATAATGGAATTGATGTG  304958514

Range 3: 241963387 to 241963413 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 25/27(93%) 1/27(4%) +1/+1
Query            26  ATGCTTTAGTTATATAT-AGAAATGAT  52
                     ||||||||||||||||| |||| ||||
Subject   241963387  ATGCTTTAGTTATATATCAGAATTGAT  241963413

Range 4: 17580046 to 17580064 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    17580046  TTAGTTATATATAGAAATG  17580064

Range 5: 19742783 to 19742801 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    19742783  TTAGTTATATATAGAAATG  19742801

Range 6: 42833739 to 42833757 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    42833739  ATGCTTTAGTTATATATAG  42833757

Range 7: 46528230 to 46528248 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    46528230  TTAGTTATATATAGAAATG  46528248

Range 8: 58634100 to 58634118 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    58634100  TTAGTTATATATAGAAATG  58634118

Range 9: 58634119 to 58634137 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    58634119  TTAGTTATATATAGAAATG  58634137

Range 10: 59307471 to 59307489 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    59307471  TTAGTTATATATAGAAATG  59307489

Range 11: 77623490 to 77623508 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    77623490  TTAGTTATATATAGAAATG  77623508

Range 12: 121175742 to 121175724 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   121175742  TTAGTTATATATAGAAATG  121175724

Range 13: 134040952 to 134040970 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   134040952  ATGCTTTAGTTATATATAG  134040970

Range 14: 158529283 to 158529265 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   158529283  ATGCTTTAGTTATATATAG  158529265

Range 15: 205329962 to 205329944 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   205329962  TTAGTTATATATAGAAATG  205329944

Range 16: 229606103 to 229606075 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 25/29(86%) 0/29(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAGAAATGATGTG  54
                     ||||||||||||||||  ||| |||| ||
Subject   229606103  ATGCTTTAGTTATATAAGGAATTGATTTG  229606075

Range 17: 289152195 to 289152213 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   289152195  TTAGTTATATATAGAAATG  289152213

Range 18: 296483866 to 296483889 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 22/24(92%) 0/24(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAGAAATG  49
                     ||||||||||||||||| | ||||
Subject   296483866  ATGCTTTAGTTATATATGGGAATG  296483889

Range 19: 329460404 to 329460422 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   329460404  ATGCTTTAGTTATATATAG  329460422

Range 20: 329495230 to 329495248 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   329495230  ATGCTTTAGTTATATATAG  329495248

Range 21: 347519870 to 347519888 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   347519870  ATGCTTTAGTTATATATAG  347519888

Range 22: 535765578 to 535765596 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   535765578  TTAGTTATATATAGAAATG  535765596

Range 23: 585301065 to 585301083 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   585301065  TTAGTTATATATAGAAATG  585301083

Jagger chromosome chr5D

Sequence ID: chr5D_Jagger Length: 570159854 Number of Matches: 30

Range 1: 49717393 to 49717336 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject    49717393  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  49717336

Range 2: 416652229 to 416652172 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
96.9 bits(106) 0.0 56/58(97%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Subject   416652229  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGGCGTGCCTT  416652172

Range 3: 396009375 to 396009318 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
87.8 bits(96) 0.0 54/58(93%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     ||||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||
Subject   396009375  TGTTGGCTTCGGTAGCTTGCTAAATATGATTTAGTTATATATAGGAATGACGTGCCTT  396009318

Range 4: 27184901 to 27184921 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
39.2 bits(42) 0.6 21/21(100%) 0/21(0%) +1/+1
Query            31  TTAGTTATATATAGAAATGAT  51
                     |||||||||||||||||||||
Subject    27184901  TTAGTTATATATAGAAATGAT  27184921

Range 5: 555776125 to 555776144 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   555776125  TTTAGTTATATATAGAAATG  555776144

Range 6: 180965948 to 180965969 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
36.5 bits(39) 7.8 21/22(95%) 0/22(0%) +1/+1
Query            20  CTGAATATGCTTTAGTTATATA  41
                     ||||| ||||||||||||||||
Subject   180965948  CTGAAAATGCTTTAGTTATATA  180965969

Range 7: 1761955 to 1761973 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     1761955  TTAGTTATATATAGAAATG  1761973

Range 8: 2209775 to 2209793 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     2209775  TTAGTTATATATAGAAATG  2209793

Range 9: 27184833 to 27184851 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    27184833  TTAGTTATATATAGAAATG  27184851

Range 10: 45986172 to 45986190 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    45986172  TTAGTTATATATAGAAATG  45986190

Range 11: 46568674 to 46568692 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    46568674  TTAGTTATATATAGAAATG  46568692

Range 12: 58264715 to 58264733 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    58264715  TTAGTTATATATAGAAATG  58264733

Range 13: 144208617 to 144208599 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   144208617  ATGCTTTAGTTATATATAG  144208599

Range 14: 166011272 to 166011290 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   166011272  ATGCTTTAGTTATATATAG  166011290

Range 15: 170168840 to 170168822 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   170168840  ATGCTTTAGTTATATATAG  170168822

Range 16: 352232336 to 352232354 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   352232336  TTAGTTATATATAGAAATG  352232354

Range 17: 358163523 to 358163505 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   358163523  TTAGTTATATATAGAAATG  358163505

Range 18: 366520905 to 366520887 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   366520905  TTAGTTATATATAGAAATG  366520887

Range 19: 388593341 to 388593323 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   388593341  TTAGTTATATATAGAAATG  388593323

Range 20: 400486383 to 400486401 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   400486383  TTAGTTATATATAGAAATG  400486401

Range 21: 440077239 to 440077257 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   440077239  TTAGTTATATATAGAAATG  440077257

Range 22: 440929568 to 440929550 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   440929568  TTAGTTATATATAGAAATG  440929550

Range 23: 459360663 to 459360645 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   459360663  TTAGTTATATATAGAAATG  459360645

Range 24: 465991596 to 465991578 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   465991596  TTAGTTATATATAGAAATG  465991578

Range 25: 485407375 to 485407357 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   485407375  TTAGTTATATATAGAAATG  485407357

Range 26: 496249869 to 496249851 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   496249869  TTAGTTATATATAGAAATG  496249851

Range 27: 509500517 to 509500499 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   509500517  TTAGTTATATATAGAAATG  509500499

Range 28: 510953741 to 510953759 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   510953741  TTAGTTATATATAGAAATG  510953759

Range 29: 520563075 to 520563057 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   520563075  TTAGTTATATATAGAAATG  520563057

Range 30: 550812299 to 550812281 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   550812299  TTAGTTATATATAGAAATG  550812281

Jagger chromosome chr5B

Sequence ID: chr5B_Jagger Length: 703598484 Number of Matches: 23

Range 1: 688883050 to 688883107 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject   688883050  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  688883107

Range 2: 83091152 to 83091174 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 22/23(96%) 0/23(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAGAAAT  48
                     |||||||||||||||| ||||||
Subject    83091152  ATGCTTTAGTTATATAAAGAAAT  83091174

Range 3: 30986884 to 30986903 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject    30986884  TTTAGTTATATATAGAAATG  30986903

Range 4: 263375840 to 263375811 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 26/30(87%) 0/30(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAGAAATGATGTGC  55
                     ||||||||  |||||||  |||||||||||
Subject   263375840  ATGCTTTATATATATATTTAAATGATGTGC  263375811

Range 5: 290549104 to 290549123 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   290549104  TTTAGTTATATATAGAAATG  290549123

Range 6: 328979782 to 328979763 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   328979782  TTTAGTTATATATAGAAATG  328979763

Range 7: 487566960 to 487566979 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   487566960  TTTAGTTATATATAGAAATG  487566979

Range 8: 634015724 to 634015705 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   634015724  TTTAGTTATATATAGAAATG  634015705

Range 9: 634015806 to 634015787 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   634015806  TTTAGTTATATATAGAAATG  634015787

Range 10: 686870529 to 686870548 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   686870529  TTTAGTTATATATAGAAATG  686870548

Range 11: 687080341 to 687080322 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   687080341  TTTAGTTATATATAGAAATG  687080322

Range 12: 687171170 to 687171151 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   687171170  TTTAGTTATATATAGAAATG  687171151

Range 13: 174304127 to 174304145 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   174304127  ATGCTTTAGTTATATATAG  174304145

Range 14: 177272949 to 177272931 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   177272949  ATGCTTTAGTTATATATAG  177272931

Range 15: 290549050 to 290549068 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   290549050  TTAGTTATATATAGAAATG  290549068

Range 16: 436401854 to 436401836 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            21  TGAATATGCTTTAGTTATA  39
                     |||||||||||||||||||
Subject   436401854  TGAATATGCTTTAGTTATA  436401836

Range 17: 459868314 to 459868296 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   459868314  ATGCTTTAGTTATATATAG  459868296

Range 18: 462042506 to 462042488 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   462042506  TTAGTTATATATAGAAATG  462042488

Range 19: 535317153 to 535317171 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   535317153  TTAGTTATATATAGAAATG  535317171

Range 20: 634015860 to 634015842 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   634015860  TTAGTTATATATAGAAATG  634015842

Range 21: 686870640 to 686870658 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   686870640  TTAGTTATATATAGAAATG  686870658

Range 22: 687080230 to 687080212 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   687080230  TTAGTTATATATAGAAATG  687080212

Range 23: 687171059 to 687171041 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   687171059  TTAGTTATATATAGAAATG  687171041

Jagger chromosome chr4D

Sequence ID: chr4D_Jagger Length: 515668560 Number of Matches: 19

Range 1: 64854006 to 64854063 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject    64854006  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  64854063

Range 2: 222799992 to 222800049 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
96.9 bits(106) 0.0 56/58(97%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Subject   222799992  TGTTGGCTTCGGTAGCTTGCTGGATATGCTTTAGTTATATATAGAAATGACGTGCCTT  222800049

Range 3: 385295520 to 385295496 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 23/25(92%) 0/25(0%) +1/-1
Query            20  CTGAATATGCTTTAGTTATATATAG  44
                     || || |||||||||||||||||||
Subject   385295520  CTAAAAATGCTTTAGTTATATATAG  385295496

Range 4: 23430317 to 23430335 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    23430317  TTAGTTATATATAGAAATG  23430335

Range 5: 90084287 to 90084269 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    90084287  TTAGTTATATATAGAAATG  90084269

Range 6: 174859380 to 174859362 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   174859380  ATGCTTTAGTTATATATAG  174859362

Range 7: 250503338 to 250503320 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   250503338  ATGCTTTAGTTATATATAG  250503320

Range 8: 366258690 to 366258672 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   366258690  ATGCTTTAGTTATATATAG  366258672

Range 9: 375334348 to 375334330 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   375334348  ATGCTTTAGTTATATATAG  375334330

Range 10: 425271369 to 425271351 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   425271369  TTAGTTATATATAGAAATG  425271351

Range 11: 465249694 to 465249712 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   465249694  TTAGTTATATATAGAAATG  465249712

Range 12: 470646594 to 470646612 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   470646594  TTAGTTATATATAGAAATG  470646612

Range 13: 491490140 to 491490122 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   491490140  TTAGTTATATATAGAAATG  491490122

Range 14: 496003926 to 496003908 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   496003926  TTAGTTATATATAGAAATG  496003908

Range 15: 500274095 to 500274077 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   500274095  TTAGTTATATATAGAAATG  500274077

Range 16: 502228403 to 502228385 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   502228403  TTAGTTATATATAGAAATG  502228385

Range 17: 514377148 to 514377130 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   514377148  TTAGTTATATATAGAAATG  514377130

Range 18: 514407129 to 514407111 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   514407129  TTAGTTATATATAGAAATG  514407111

Range 19: 515331355 to 515331373 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   515331355  TTAGTTATATATAGAAATG  515331373

Jagger chromosome chr4A

Sequence ID: chr4A_Jagger Length: 743847818 Number of Matches: 18

Range 1: 609478107 to 609478050 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject   609478107  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  609478050

Range 2: 610219161 to 610219104 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject   610219161  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  610219104

Range 3: 707907840 to 707907784 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
50.9 bits(55) 0.0 46/57(81%) 1/57(2%) +1/-1
Query             3  TTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATA-GAAATGATGTGCCTT  59
                     |||| ||  |||||||| || || ||| ||||||||||||| ||| |||  ||||||
Subject   707907840  TTGGTTTAAGTAGCTTGGTGGATGTGCATTAGTTATATATAGGAATTGACATGCCTT  707907784

Range 4: 624720221 to 624720199 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 22/23(96%) 0/23(0%) +1/-1
Query            36  TATATATAGAAATGATGTGCCTT  58
                     ||||||||||||||| |||||||
Subject   624720221  TATATATAGAAATGAAGTGCCTT  624720199

Range 5: 624741135 to 624741113 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 22/23(96%) 0/23(0%) +1/-1
Query            36  TATATATAGAAATGATGTGCCTT  58
                     ||||||||||||||| |||||||
Subject   624741135  TATATATAGAAATGAAGTGCCTT  624741113

Range 6: 11788752 to 11788771 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject    11788752  TTTAGTTATATATAGAAATG  11788771

Range 7: 650518198 to 650518217 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   650518198  TTTAGTTATATATAGAAATG  650518217

Range 8: 650729943 to 650729962 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   650729943  TTTAGTTATATATAGAAATG  650729962

Range 9: 76473711 to 76473729 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    76473711  TTAGTTATATATAGAAATG  76473729

Range 10: 173210844 to 173210826 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   173210844  ATGCTTTAGTTATATATAG  173210826

Range 11: 224700486 to 224700504 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   224700486  ATGCTTTAGTTATATATAG  224700504

Range 12: 469842680 to 469842662 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   469842680  TTAGTTATATATAGAAATG  469842662

Range 13: 527444062 to 527444080 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   527444062  TTAGTTATATATAGAAATG  527444080

Range 14: 550204242 to 550204224 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   550204242  TTAGTTATATATAGAAATG  550204224

Range 15: 570975675 to 570975657 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   570975675  TTAGTTATATATAGAAATG  570975657

Range 16: 630472803 to 630472821 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   630472803  ATGCTTTAGTTATATATAG  630472821

Range 17: 650518144 to 650518162 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   650518144  TTAGTTATATATAGAAATG  650518162

Range 18: 661124261 to 661124279 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   661124261  TTAGTTATATATAGAAATG  661124279

Jagger chromosome chr2B

Sequence ID: chr2B_Jagger Length: 810734643 Number of Matches: 18

Range 1: 26354830 to 26354887 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject    26354830  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  26354887

Range 2: 60639456 to 60639478 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 22/23(96%) 0/23(0%) +1/+1
Query            35  TTATATATAGAAATGATGTGCCT  57
                     ||||||||||||| |||||||||
Subject    60639456  TTATATATAGAAAAGATGTGCCT  60639478

Range 3: 93745140 to 93745162 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 22/23(96%) 0/23(0%) +1/+1
Query            35  TTATATATAGAAATGATGTGCCT  57
                     |||||||||||||||||| ||||
Subject    93745140  TTATATATAGAAATGATGCGCCT  93745162

Range 4: 177283138 to 177283111 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 25/28(89%) 0/28(0%) +1/-1
Query            27  TGCTTTAGTTATATATAGAAATGATGTG  54
                     |||||||||||||||| ||| |||| ||
Subject   177283138  TGCTTTAGTTATATATTGAACTGATTTG  177283111

Range 5: 96832324 to 96832305 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject    96832324  TTTAGTTATATATAGAAATG  96832305

Range 6: 96832379 to 96832360 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject    96832379  TTTAGTTATATATAGAAATG  96832360

Range 7: 413748391 to 413748372 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   413748391  TTTAGTTATATATAGAAATG  413748372

Range 8: 560752070 to 560752051 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   560752070  TTTAGTTATATATAGAAATG  560752051

Range 9: 467295987 to 467295961 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
36.5 bits(39) 7.8 24/27(89%) 0/27(0%) +1/-1
Query            31  TTAGTTATATATAGAAATGATGTGCCT  57
                     ||| |||||||||||||  ||||||||
Subject   467295987  TTAATTATATATAGAAAAAATGTGCCT  467295961

Range 10: 39185479 to 39185461 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    39185479  TTAGTTATATATAGAAATG  39185461

Range 11: 65523233 to 65523251 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    65523233  ATGCTTTAGTTATATATAG  65523251

Range 12: 65543999 to 65544017 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    65543999  ATGCTTTAGTTATATATAG  65544017

Range 13: 65758036 to 65758054 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    65758036  ATGCTTTAGTTATATATAG  65758054

Range 14: 76579258 to 76579276 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    76579258  TTAGTTATATATAGAAATG  76579276

Range 15: 96832433 to 96832415 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    96832433  TTAGTTATATATAGAAATG  96832415

Range 16: 535827034 to 535827052 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   535827034  ATGCTTTAGTTATATATAG  535827052

Range 17: 750830200 to 750830182 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   750830200  TTAGTTATATATAGAAATG  750830182

Range 18: 759232090 to 759232072 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   759232090  TTAGTTATATATAGAAATG  759232072

Jagger chromosome chr2A

Sequence ID: chr2A_Jagger Length: 804285258 Number of Matches: 30

Range 1: 798284699 to 798284756 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
101.4 bits(111) 0.0 57/58(98%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject   798284699  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  798284756

Range 2: 733362155 to 733362098 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
96.9 bits(106) 0.0 56/58(97%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Subject   733362155  TGTTGGCTTCGGTAGCTTGCTGAATATGTTTTAGTTATATATAGAAATGACGTGCCTT  733362098

Range 3: 795809783 to 795809840 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
92.4 bits(101) 0.0 55/58(95%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||
Subject   795809783  TGTTGGCTTCGATAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGGCGTGCCTT  795809840

Range 4: 795845016 to 795845073 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
92.4 bits(101) 0.0 55/58(95%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||
Subject   795845016  TGTTGGCTTCAGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGGCGTGCCTT  795845073

Range 5: 22810019 to 22810000 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject    22810019  TTTAGTTATATATAGAAATG  22810000

Range 6: 1151429 to 1151447 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     1151429  TTAGTTATATATAGAAATG  1151447

Range 7: 1199422 to 1199440 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     1199422  TTAGTTATATATAGAAATG  1199440

Range 8: 1211652 to 1211634 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     1211652  TTAGTTATATATAGAAATG  1211634

Range 9: 2618068 to 2618050 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     2618068  TTAGTTATATATAGAAATG  2618050

Range 10: 3027233 to 3027251 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     3027233  TTAGTTATATATAGAAATG  3027251

Range 11: 3088773 to 3088791 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     3088773  TTAGTTATATATAGAAATG  3088791

Range 12: 4271391 to 4271373 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     4271391  TTAGTTATATATAGAAATG  4271373

Range 13: 4345899 to 4345881 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     4345899  TTAGTTATATATAGAAATG  4345881

Range 14: 6504272 to 6504290 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     6504272  TTAGTTATATATAGAAATG  6504290

Range 15: 11061092 to 11061074 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    11061092  TTAGTTATATATAGAAATG  11061074

Range 16: 13443497 to 13443515 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    13443497  TTAGTTATATATAGAAATG  13443515

Range 17: 15624303 to 15624321 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    15624303  TTAGTTATATATAGAAATG  15624321

Range 18: 20004827 to 20004845 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    20004827  TTAGTTATATATAGAAATG  20004845

Range 19: 21977080 to 21977098 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    21977080  TTAGTTATATATAGAAATG  21977098

Range 20: 22279888 to 22279906 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    22279888  TTAGTTATATATAGAAATG  22279906

Range 21: 22559384 to 22559366 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    22559384  TTAGTTATATATAGAAATG  22559366

Range 22: 22731110 to 22731092 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    22731110  TTAGTTATATATAGAAATG  22731092

Range 23: 23454863 to 23454845 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    23454863  TTAGTTATATATAGAAATG  23454845

Range 24: 24492220 to 24492202 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    24492220  TTAGTTATATATAGAAATG  24492202

Range 25: 26159786 to 26159804 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    26159786  TTAGTTATATATAGAAATG  26159804

Range 26: 26282029 to 26282047 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    26282029  TTAGTTATATATAGAAATG  26282047

Range 27: 26457819 to 26457801 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    26457819  TTAGTTATATATAGAAATG  26457801

Range 28: 26728089 to 26728107 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    26728089  TTAGTTATATATAGAAATG  26728107

Range 29: 26733282 to 26733300 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    26733282  TTAGTTATATATAGAAATG  26733300

Range 30: 28476919 to 28476937 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    28476919  TTAGTTATATATAGAAATG  28476937

Jagger chromosome chr3B

Sequence ID: chr3B_Jagger Length: 855759449 Number of Matches: 10

Range 1: 619528569 to 619528622 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
98.7 bits(108) 0.0 54/54(100%) 0/54(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTG  54
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   619528569  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTG  619528622

Range 2: 206243865 to 206243892 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 25/28(89%) 0/28(0%) +1/+1
Query            31  TTAGTTATATATAGAAATGATGTGCCTT  58
                     ||| |||||||||||||  |||||||||
Subject   206243865  TTAATTATATATAGAAAAAATGTGCCTT  206243892

Range 3: 140287623 to 140287594 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 26/30(87%) 0/30(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAGAAATGATGTGC  55
                     ||||||||  |||||||  |||||||||||
Subject   140287623  ATGCTTTATATATATATTTAAATGATGTGC  140287594

Range 4: 421112309 to 421112338 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 26/30(87%) 0/30(0%) +1/+1
Query            20  CTGAATATGCTTTAGTTATATATAGAAATG  49
                     || ||||||||||||||| ||| | |||||
Subject   421112309  CTAAATATGCTTTAGTTAGATAAAAAAATG  421112338

Range 5: 17347629 to 17347657 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 25/29(86%) 0/29(0%) +1/+1
Query            20  CTGAATATGCTTTAGTTATATATAGAAAT  48
                     || || ||||||||||||||||  |||||
Subject    17347629  CTAAAAATGCTTTAGTTATATAAGGAAAT  17347657

Range 6: 231179981 to 231179963 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   231179981  ATGCTTTAGTTATATATAG  231179963

Range 7: 339682405 to 339682423 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   339682405  ATGCTTTAGTTATATATAG  339682423

Range 8: 382600421 to 382600403 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   382600421  ATGCTTTAGTTATATATAG  382600403

Range 9: 616190517 to 616190489 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 25/29(86%) 0/29(0%) +1/-1
Query            10  CGGTAGCTTGCTGAATATGCTTTAGTTAT  38
                     |||||||||||| | | |||||||| |||
Subject   616190517  CGGTAGCTTGCTAATTCTGCTTTAGCTAT  616190489

Range 10: 663664883 to 663664860 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 22/24(92%) 0/24(0%) +1/-1
Query            35  TTATATATAGAAATGATGTGCCTT  58
                     |||||||||  |||||||||||||
Subject   663664883  TTATATATACTAATGATGTGCCTT  663664860

Jagger chromosome chr7A

Sequence ID: chr7A_Jagger Length: 745201001 Number of Matches: 25

Range 1: 11796010 to 11795953 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
96.9 bits(106) 0.0 56/58(97%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Subject    11796010  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACATGCCTT  11795953

Range 2: 527871338 to 527871281 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
96.9 bits(106) 0.0 56/58(97%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Subject   527871338  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGGCGTGCCTT  527871281

Range 3: 505574267 to 505574293 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
36.5 bits(39) 7.8 24/27(89%) 0/27(0%) +1/+1
Query            23  AATATGCTTTAGTTATATATAGAAATG  49
                     ||||||||||||||| ||| | |||||
Subject   505574267  AATATGCTTTAGTTAGATAAAAAAATG  505574293

Range 4: 51872473 to 51872455 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    51872473  TTAGTTATATATAGAAATG  51872455

Range 5: 101064974 to 101064956 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   101064974  TTAGTTATATATAGAAATG  101064956

Range 6: 101065035 to 101065017 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   101065035  TTAGTTATATATAGAAATG  101065017

Range 7: 107554261 to 107554279 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   107554261  TTAGTTATATATAGAAATG  107554279

Range 8: 173152972 to 173152990 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   173152972  TTAGTTATATATAGAAATG  173152990

Range 9: 280615811 to 280615793 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   280615811  TTAGTTATATATAGAAATG  280615793

Range 10: 304082706 to 304082688 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   304082706  ATGCTTTAGTTATATATAG  304082688

Range 11: 320354912 to 320354930 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   320354912  ATGCTTTAGTTATATATAG  320354930

Range 12: 464438643 to 464438625 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   464438643  TTAGTTATATATAGAAATG  464438625

Range 13: 551409142 to 551409180 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 31/39(79%) 0/39(0%) +1/+1
Query             8  TTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAA  46
                     || |||| ||  ||| || || |||||||||||| ||||
Subject   551409142  TTAGGTAACTCCCTGGATTTGTTTTAGTTATATAGAGAA  551409180

Range 14: 573736373 to 573736391 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   573736373  ATGCTTTAGTTATATATAG  573736391

Range 15: 610980880 to 610980862 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   610980880  ATGCTTTAGTTATATATAG  610980862

Range 16: 622800272 to 622800254 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   622800272  ATGCTTTAGTTATATATAG  622800254

Range 17: 671786229 to 671786247 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   671786229  TTAGTTATATATAGAAATG  671786247

Range 18: 677050655 to 677050673 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   677050655  TTAGTTATATATAGAAATG  677050673

Range 19: 687656862 to 687656844 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   687656862  TTAGTTATATATAGAAATG  687656844

Range 20: 687656881 to 687656863 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   687656881  TTAGTTATATATAGAAATG  687656863

Range 21: 691910576 to 691910594 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   691910576  TTAGTTATATATAGAAATG  691910594

Range 22: 695432096 to 695432114 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   695432096  TTAGTTATATATAGAAATG  695432114

Range 23: 704795414 to 704795432 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   704795414  TTAGTTATATATAGAAATG  704795432

Range 24: 704798125 to 704798143 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   704798125  TTAGTTATATATAGAAATG  704798143

Range 25: 739282655 to 739282637 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   739282655  TTAGTTATATATAGAAATG  739282637

Jagger chromosome chr3D

Sequence ID: chr3D_Jagger Length: 614042580 Number of Matches: 30

Range 1: 359401932 to 359401989 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
96.9 bits(106) 0.0 56/58(97%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Subject   359401932  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGGCGTGCCTT  359401989

Range 2: 14747067 to 14747096 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 26/30(87%) 0/30(0%) +1/+1
Query            20  CTGAATATGCTTTAGTTATATATAGAAATG  49
                     || ||||||||||||||| ||| | |||||
Subject    14747067  CTAAATATGCTTTAGTTAGATAAAAAAATG  14747096

Range 3: 33151550 to 33151574 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 23/25(92%) 0/25(0%) +1/+1
Query            20  CTGAATATGCTTTAGTTATATATAG  44
                     || || |||||||||||||||||||
Subject    33151550  CTAAAAATGCTTTAGTTATATATAG  33151574

Range 4: 11505231 to 11505249 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    11505231  TTAGTTATATATAGAAATG  11505249

Range 5: 13960112 to 13960130 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    13960112  TTAGTTATATATAGAAATG  13960130

Range 6: 14639982 to 14639964 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    14639982  TTAGTTATATATAGAAATG  14639964

Range 7: 17033775 to 17033757 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    17033775  TTAGTTATATATAGAAATG  17033757

Range 8: 20239983 to 20240001 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    20239983  TTAGTTATATATAGAAATG  20240001

Range 9: 23538017 to 23537999 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    23538017  TTAGTTATATATAGAAATG  23537999

Range 10: 27633403 to 27633421 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    27633403  TTAGTTATATATAGAAATG  27633421

Range 11: 57583616 to 57583634 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    57583616  ATGCTTTAGTTATATATAG  57583634

Range 12: 79346007 to 79345989 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    79346007  TTAGTTATATATAGAAATG  79345989

Range 13: 157277075 to 157277093 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   157277075  TTAGTTATATATAGAAATG  157277093

Range 14: 195709559 to 195709541 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   195709559  TTAGTTATATATAGAAATG  195709541

Range 15: 197863100 to 197863082 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   197863100  ATGCTTTAGTTATATATAG  197863082

Range 16: 204132775 to 204132757 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   204132775  ATGCTTTAGTTATATATAG  204132757

Range 17: 204257127 to 204257145 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   204257127  ATGCTTTAGTTATATATAG  204257145

Range 18: 258832932 to 258832914 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   258832932  TTAGTTATATATAGAAATG  258832914

Range 19: 432187460 to 432187442 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   432187460  ATGCTTTAGTTATATATAG  432187442

Range 20: 458664495 to 458664477 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   458664495  ATGCTTTAGTTATATATAG  458664477

Range 21: 468184901 to 468184883 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   468184901  ATGCTTTAGTTATATATAG  468184883

Range 22: 548714456 to 548714438 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   548714456  TTAGTTATATATAGAAATG  548714438

Range 23: 554332575 to 554332557 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   554332575  TTAGTTATATATAGAAATG  554332557

Range 24: 562710729 to 562710711 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   562710729  TTAGTTATATATAGAAATG  562710711

Range 25: 568032658 to 568032676 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   568032658  TTAGTTATATATAGAAATG  568032676

Range 26: 570704333 to 570704315 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   570704333  TTAGTTATATATAGAAATG  570704315

Range 27: 573461808 to 573461826 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   573461808  TTAGTTATATATAGAAATG  573461826

Range 28: 588684843 to 588684825 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   588684843  TTAGTTATATATAGAAATG  588684825

Range 29: 588927717 to 588927735 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   588927717  TTAGTTATATATAGAAATG  588927735

Range 30: 591320303 to 591320285 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   591320303  TTAGTTATATATAGAAATG  591320285

Jagger chromosome chr1A

Sequence ID: chr1A_Jagger Length: 596211899 Number of Matches: 15

Range 1: 5904631 to 5904574 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
96.9 bits(106) 0.0 56/58(97%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Subject     5904631  TGTTGGCTTCGGTAGCTTGCTGAATATGTTTTAGTTATATATAGATATGATGTGCCTT  5904574

Range 2: 318021291 to 318021234 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
92.4 bits(101) 0.0 55/58(95%) 0/58(0%) +1/-1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||
Subject   318021291  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACATGCATT  318021234

Range 3: 2953178 to 2953196 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     2953178  TTAGTTATATATAGAAATG  2953196

Range 4: 17290414 to 17290396 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    17290414  TTAGTTATATATAGAAATG  17290396

Range 5: 23193416 to 23193398 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    23193416  ATGCTTTAGTTATATATAG  23193398

Range 6: 66013318 to 66013300 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    66013318  TTAGTTATATATAGAAATG  66013300

Range 7: 182029622 to 182029640 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   182029622  ATGCTTTAGTTATATATAG  182029640

Range 8: 309311679 to 309311661 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   309311679  ATGCTTTAGTTATATATAG  309311661

Range 9: 339615301 to 339615319 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   339615301  ATGCTTTAGTTATATATAG  339615319

Range 10: 514150445 to 514150463 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   514150445  TTAGTTATATATAGAAATG  514150463

Range 11: 517778400 to 517778418 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   517778400  TTAGTTATATATAGAAATG  517778418

Range 12: 569399065 to 569399083 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   569399065  TTAGTTATATATAGAAATG  569399083

Range 13: 569399084 to 569399102 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   569399084  TTAGTTATATATAGAAATG  569399102

Range 14: 569399103 to 569399121 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   569399103  TTAGTTATATATAGAAATG  569399121

Range 15: 569399122 to 569399140 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   569399122  TTAGTTATATATAGAAATG  569399140

Jagger chromosome chrUn

Sequence ID: chrUn_Jagger Length: 379824255 Number of Matches: 13

Range 1: 41324168 to 41324225 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
92.4 bits(101) 0.0 55/58(95%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||
Subject    41324168  TGTTGGCTTTGATAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  41324225

Range 2: 154575228 to 154575247 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   154575228  TTTAGTTATATATAGAAATG  154575247

Range 3: 154630343 to 154630362 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   154630343  TTTAGTTATATATAGAAATG  154630362

Range 4: 11556052 to 11556070 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    11556052  TTAGTTATATATAGAAATG  11556070

Range 5: 12137813 to 12137831 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    12137813  TTAGTTATATATAGAAATG  12137831

Range 6: 13178609 to 13178591 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    13178609  TTAGTTATATATAGAAATG  13178591

Range 7: 18029615 to 18029633 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    18029615  TTAGTTATATATAGAAATG  18029633

Range 8: 19959415 to 19959433 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    19959415  ATGCTTTAGTTATATATAG  19959433

Range 9: 48489636 to 48489618 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    48489636  TTAGTTATATATAGAAATG  48489618

Range 10: 130033551 to 130033569 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   130033551  TTAGTTATATATAGAAATG  130033569

Range 11: 154575339 to 154575357 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   154575339  TTAGTTATATATAGAAATG  154575357

Range 12: 154630454 to 154630472 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   154630454  TTAGTTATATATAGAAATG  154630472

Range 13: 237412729 to 237412711 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   237412729  TTAGTTATATATAGAAATG  237412711

Jagger chromosome chr7D

Sequence ID: chr7D_Jagger Length: 643344672 Number of Matches: 30

Range 1: 87521555 to 87521612 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
92.4 bits(101) 0.0 55/58(95%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Subject    87521555  TGTTTGCTACGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGACGTGCCTT  87521612

Range 2: 65730292 to 65730312 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
39.2 bits(42) 0.6 21/21(100%) 0/21(0%) +1/+1
Query            31  TTAGTTATATATAGAAATGAT  51
                     |||||||||||||||||||||
Subject    65730292  TTAGTTATATATAGAAATGAT  65730312

Range 3: 590398535 to 590398556 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
36.5 bits(39) 7.8 21/22(95%) 0/22(0%) +1/+1
Query            21  TGAATATGCTTTAGTTATATAT  42
                     ||||||||||||||| ||||||
Subject   590398535  TGAATATGCTTTAGTAATATAT  590398556

Range 4: 12668013 to 12668031 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    12668013  TTAGTTATATATAGAAATG  12668031

Range 5: 19294367 to 19294349 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    19294367  TTAGTTATATATAGAAATG  19294349

Range 6: 26084123 to 26084105 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    26084123  TTAGTTATATATAGAAATG  26084105

Range 7: 26542961 to 26542943 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    26542961  TTAGTTATATATAGAAATG  26542943

Range 8: 27353643 to 27353625 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    27353643  TTAGTTATATATAGAAATG  27353625

Range 9: 43659230 to 43659212 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    43659230  TTAGTTATATATAGAAATG  43659212

Range 10: 49376363 to 49376345 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    49376363  TTAGTTATATATAGAAATG  49376345

Range 11: 49458629 to 49458611 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    49458629  TTAGTTATATATAGAAATG  49458611

Range 12: 49501916 to 49501898 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    49501916  TTAGTTATATATAGAAATG  49501898

Range 13: 56073300 to 56073318 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    56073300  TTAGTTATATATAGAAATG  56073318

Range 14: 60678764 to 60678782 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    60678764  TTAGTTATATATAGAAATG  60678782

Range 15: 69062052 to 69062034 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    69062052  ATGCTTTAGTTATATATAG  69062034

Range 16: 73400971 to 73400953 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    73400971  TTAGTTATATATAGAAATG  73400953

Range 17: 77595062 to 77595080 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    77595062  TTAGTTATATATAGAAATG  77595080

Range 18: 101219646 to 101219664 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   101219646  TTAGTTATATATAGAAATG  101219664

Range 19: 107321539 to 107321557 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   107321539  TTAGTTATATATAGAAATG  107321557

Range 20: 107505992 to 107506010 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   107505992  TTAGTTATATATAGAAATG  107506010

Range 21: 112528593 to 112528575 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   112528593  TTAGTTATATATAGAAATG  112528575

Range 22: 288161710 to 288161728 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   288161710  ATGCTTTAGTTATATATAG  288161728

Range 23: 303952905 to 303952887 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   303952905  ATGCTTTAGTTATATATAG  303952887

Range 24: 487840596 to 487840614 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   487840596  ATGCTTTAGTTATATATAG  487840614

Range 25: 497143994 to 497143976 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   497143994  ATGCTTTAGTTATATATAG  497143976

Range 26: 514798898 to 514798880 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   514798898  ATGCTTTAGTTATATATAG  514798880

Range 27: 520964021 to 520964003 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   520964021  TTAGTTATATATAGAAATG  520964003

Range 28: 606165350 to 606165368 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   606165350  TTAGTTATATATAGAAATG  606165368

Range 29: 627358365 to 627358383 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   627358365  TTAGTTATATATAGAAATG  627358383

Range 30: 628414373 to 628414355 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   628414373  TTAGTTATATATAGAAATG  628414355

Jagger chromosome chr1B

Sequence ID: chr1B_Jagger Length: 705338699 Number of Matches: 13

Range 1: 574480262 to 574480319 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
83.3 bits(91) 0.0 53/58(91%) 0/58(0%) +1/+1
Query             1  TGTTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     ||||||||| ||||||||||| |||||||||||||||||||||| ||||  |||||||
Subject   574480262  TGTTGGCTTTGGTAGCTTGCTAAATATGCTTTAGTTATATATAGGAATGGCGTGCCTT  574480319

Range 2: 56050374 to 56050393 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject    56050374  TTTAGTTATATATAGAAATG  56050393

Range 3: 56050429 to 56050448 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject    56050429  TTTAGTTATATATAGAAATG  56050448

Range 4: 528362080 to 528362051 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 26/30(87%) 0/30(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAGAAATGATGTGC  55
                     ||||||||  |||||||  |||||||||||
Subject   528362080  ATGCTTTATATATATATTTAAATGATGTGC  528362051

Range 5: 679231639 to 679231658 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   679231639  TTTAGTTATATATAGAAATG  679231658

Range 6: 679231667 to 679231686 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   679231667  TTTAGTTATATATAGAAATG  679231686

Range 7: 332201265 to 332201244 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
36.5 bits(39) 7.8 21/22(95%) 0/22(0%) +1/-1
Query            20  CTGAATATGCTTTAGTTATATA  41
                     || |||||||||||||||||||
Subject   332201265  CTAAATATGCTTTAGTTATATA  332201244

Range 8: 470859925 to 470859899 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
36.5 bits(39) 7.8 24/27(89%) 0/27(0%) +1/-1
Query            31  TTAGTTATATATAGAAATGATGTGCCT  57
                     ||||||||||||| |||  ||||||||
Subject   470859925  TTAGTTATATATATAAAAAATGTGCCT  470859899

Range 9: 18905720 to 18905697 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 22/24(92%) 0/24(0%) +1/-1
Query            13  TAGCTTGCTGAATATGCTTTAGTT  36
                     |||||| ||||| |||||||||||
Subject    18905720  TAGCTTCCTGAACATGCTTTAGTT  18905697

Range 10: 18906919 to 18906896 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 22/24(92%) 0/24(0%) +1/-1
Query            13  TAGCTTGCTGAATATGCTTTAGTT  36
                     |||||| ||||||||||||| |||
Subject    18906919  TAGCTTCCTGAATATGCTTTTGTT  18906896

Range 11: 56050305 to 56050323 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    56050305  TTAGTTATATATAGAAATG  56050323

Range 12: 64677110 to 64677092 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            30  TTTAGTTATATATAGAAAT  48
                     |||||||||||||||||||
Subject    64677110  TTTAGTTATATATAGAAAT  64677092

Range 13: 571623610 to 571623628 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   571623610  TTAGTTATATATAGAAATG  571623628

Jagger chromosome chr7B

Sequence ID: chr7B_Jagger Length: 749284433 Number of Matches: 8

Range 1: 737172740 to 737172795 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
57.2 bits(62) 0.0 46/56(82%) 0/56(0%) +1/+1
Query             3  TTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||| || ||||| ||| || || |||||||||||||||||| |||||  | ||||
Subject   737172740  TTGGTTTAGGTAGATTGGTGGATGTGCTTTAGTTATATATAGGAATGACATTCCTT  737172795

Range 2: 737190820 to 737190875 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
57.2 bits(62) 0.0 46/56(82%) 0/56(0%) +1/+1
Query             3  TTGGCTTCGGTAGCTTGCTGAATATGCTTTAGTTATATATAGAAATGATGTGCCTT  58
                     |||| || ||||| ||| || || |||||||||||||||||| |||||  | ||||
Subject   737190820  TTGGTTTAGGTAGATTGGTGGATGTGCTTTAGTTATATATAGGAATGACATTCCTT  737190875

Range 3: 166278091 to 166278110 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   166278091  TTTAGTTATATATAGAAATG  166278110

Range 4: 711546216 to 711546245 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 26/30(87%) 0/30(0%) +1/+1
Query            17  TTGCTGAATATGCTTTAGTTATATATAGAA  46
                     |||| | |||| ||||||||||||| ||||
Subject   711546216  TTGCGGGATATCCTTTAGTTATATAGAGAA  711546245

Range 5: 723521474 to 723521455 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   723521474  TTTAGTTATATATAGAAATG  723521455

Range 6: 327159079 to 327159061 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   327159079  ATGCTTTAGTTATATATAG  327159061

Range 7: 360216930 to 360216906 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 24/26(92%) 1/26(4%) +1/-1
Query            33  AGTTATATATAGAAATGATGTGCCTT  58
                     ||| |||||||||||||||| |||||
Subject   360216930  AGTAATATATAGAAATGATG-GCCTT  360216905

Range 8: 408248772 to 408248790 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   408248772  ATGCTTTAGTTATATATAG  408248790

Jagger chromosome chr4B

Sequence ID: chr4B_Jagger Length: 673340788 Number of Matches: 10

Range 1: 7123699 to 7123721 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
38.3 bits(41) 2.2 22/23(96%) 0/23(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATGATG  52
                     |||||||||||||||||||| ||
Subject     7123699  TTTAGTTATATATAGAAATGCTG  7123721

Range 2: 7123781 to 7123800 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject     7123781  TTTAGTTATATATAGAAATG  7123800

Range 3: 71269798 to 71269817 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject    71269798  TTTAGTTATATATAGAAATG  71269817

Range 4: 153315856 to 153315837 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   153315856  TTTAGTTATATATAGAAATG  153315837

Range 5: 415725715 to 415725734 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/+1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   415725715  TTTAGTTATATATAGAAATG  415725734

Range 6: 7123657 to 7123675 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     7123657  TTAGTTATATATAGAAATG  7123675

Range 7: 7123825 to 7123843 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     7123825  TTAGTTATATATAGAAATG  7123843

Range 8: 112382147 to 112382165 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            37  ATATATAGAAATGATGTGC  55
                     |||||||||||||||||||
Subject   112382147  ATATATAGAAATGATGTGC  112382165

Range 9: 462037523 to 462037505 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   462037523  ATGCTTTAGTTATATATAG  462037505

Range 10: 664510327 to 664510345 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   664510327  TTAGTTATATATAGAAATG  664510345

Jagger chromosome chr2D

Sequence ID: chr2D_Jagger Length: 673981989 Number of Matches: 19

Range 1: 248090321 to 248090297 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 23/25(92%) 0/25(0%) +1/-1
Query            20  CTGAATATGCTTTAGTTATATATAG  44
                     || || |||||||||||||||||||
Subject   248090321  CTAAAAATGCTTTAGTTATATATAG  248090297

Range 2: 298027372 to 298027353 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAGA  45
                     ||||||||||||||||||||
Subject   298027372  ATGCTTTAGTTATATATAGA  298027353

Range 3: 607343620 to 607343594 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 25/27(93%) 1/27(4%) +1/-1
Query            26  ATGCTTTAGTTATATAT-AGAAATGAT  52
                     ||||||||||||||||| |||| ||||
Subject   607343620  ATGCTTTAGTTATATATGAGAATTGAT  607343594

Range 4: 652334671 to 652334652 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
37.4 bits(40) 2.2 20/20(100%) 0/20(0%) +1/-1
Query            30  TTTAGTTATATATAGAAATG  49
                     ||||||||||||||||||||
Subject   652334671  TTTAGTTATATATAGAAATG  652334652

Range 5: 24956943 to 24956961 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    24956943  TTAGTTATATATAGAAATG  24956961

Range 6: 33858369 to 33858387 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    33858369  TTAGTTATATATAGAAATG  33858387

Range 7: 36275851 to 36275869 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    36275851  TTAGTTATATATAGAAATG  36275869

Range 8: 59743456 to 59743438 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    59743456  TTAGTTATATATAGAAATG  59743438

Range 9: 88161223 to 88161241 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    88161223  TTAGTTATATATAGAAATG  88161241

Range 10: 90122473 to 90122491 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    90122473  TTAGTTATATATAGAAATG  90122491

Range 11: 132028326 to 132028344 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   132028326  ATGCTTTAGTTATATATAG  132028344

Range 12: 250725542 to 250725524 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   250725542  ATGCTTTAGTTATATATAG  250725524

Range 13: 532349610 to 532349628 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   532349610  TTAGTTATATATAGAAATG  532349628

Range 14: 558880036 to 558880018 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   558880036  ATGCTTTAGTTATATATAG  558880018

Range 15: 591149128 to 591149110 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   591149128  TTAGTTATATATAGAAATG  591149110

Range 16: 630958537 to 630958555 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   630958537  ATGCTTTAGTTATATATAG  630958555

Range 17: 644567735 to 644567717 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   644567735  TTAGTTATATATAGAAATG  644567717

Range 18: 646676625 to 646676607 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   646676625  TTAGTTATATATAGAAATG  646676607

Range 19: 653200953 to 653200971 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   653200953  TTAGTTATATATAGAAATG  653200971

Jagger chromosome chr5A

Sequence ID: chr5A_Jagger Length: 713320806 Number of Matches: 22

Range 1: 34768573 to 34768591 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    34768573  TTAGTTATATATAGAAATG  34768591

Range 2: 39114866 to 39114848 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    39114866  ATGCTTTAGTTATATATAG  39114848

Range 3: 170713675 to 170713657 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   170713675  TTAGTTATATATAGAAATG  170713657

Range 4: 292322011 to 292322029 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   292322011  TTAGTTATATATAGAAATG  292322029

Range 5: 326365627 to 326365609 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   326365627  TTAGTTATATATAGAAATG  326365609

Range 6: 326365646 to 326365628 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   326365646  TTAGTTATATATAGAAATG  326365628

Range 7: 327298083 to 327298101 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   327298083  TTAGTTATATATAGAAATG  327298101

Range 8: 327298102 to 327298120 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   327298102  TTAGTTATATATAGAAATG  327298120

Range 9: 339684339 to 339684357 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   339684339  TTAGTTATATATAGAAATG  339684357

Range 10: 339684358 to 339684376 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   339684358  TTAGTTATATATAGAAATG  339684376

Range 11: 349508165 to 349508147 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   349508165  ATGCTTTAGTTATATATAG  349508147

Range 12: 427738006 to 427738024 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   427738006  TTAGTTATATATAGAAATG  427738024

Range 13: 463274943 to 463274961 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   463274943  ATGCTTTAGTTATATATAG  463274961

Range 14: 473831303 to 473831285 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   473831303  TTAGTTATATATAGAAATG  473831285

Range 15: 515828026 to 515828044 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   515828026  ATGCTTTAGTTATATATAG  515828044

Range 16: 518509933 to 518509915 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   518509933  TTAGTTATATATAGAAATG  518509915

Range 17: 577010486 to 577010504 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   577010486  TTAGTTATATATAGAAATG  577010504

Range 18: 581856417 to 581856435 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   581856417  TTAGTTATATATAGAAATG  581856435

Range 19: 606081945 to 606081963 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   606081945  TTAGTTATATATAGAAATG  606081963

Range 20: 693780738 to 693780756 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   693780738  TTAGTTATATATAGAAATG  693780756

Range 21: 701287444 to 701287426 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   701287444  TTAGTTATATATAGAAATG  701287426

Range 22: 708105780 to 708105798 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   708105780  TTAGTTATATATAGAAATG  708105798

Jagger chromosome chr3A

Sequence ID: chr3A_Jagger Length: 754496630 Number of Matches: 20

Range 1: 14426490 to 14426508 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    14426490  TTAGTTATATATAGAAATG  14426508

Range 2: 14426551 to 14426569 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    14426551  TTAGTTATATATAGAAATG  14426569

Range 3: 35418798 to 35418816 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    35418798  TTAGTTATATATAGAAATG  35418816

Range 4: 36720268 to 36720286 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    36720268  ATGCTTTAGTTATATATAG  36720286

Range 5: 52319075 to 52319057 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    52319075  TTAGTTATATATAGAAATG  52319057

Range 6: 87579696 to 87579678 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    87579696  TTAGTTATATATAGAAATG  87579678

Range 7: 87579757 to 87579739 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    87579757  TTAGTTATATATAGAAATG  87579739

Range 8: 146008577 to 146008549 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 25/29(86%) 0/29(0%) +1/-1
Query            20  CTGAATATGCTTTAGTTATATATAGAAAT  48
                     ||| | ||||||||||||||||| | |||
Subject   146008577  CTGGAAATGCTTTAGTTATATATGGGAAT  146008549

Range 9: 174360516 to 174360534 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   174360516  ATGCTTTAGTTATATATAG  174360534

Range 10: 187346783 to 187346765 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   187346783  TTAGTTATATATAGAAATG  187346765

Range 11: 258864777 to 258864759 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   258864777  ATGCTTTAGTTATATATAG  258864759

Range 12: 315981505 to 315981523 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   315981505  ATGCTTTAGTTATATATAG  315981523

Range 13: 428565234 to 428565252 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   428565234  ATGCTTTAGTTATATATAG  428565252

Range 14: 448956422 to 448956440 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   448956422  TTAGTTATATATAGAAATG  448956440

Range 15: 533686985 to 533687003 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   533686985  TTAGTTATATATAGAAATG  533687003

Range 16: 553229707 to 553229725 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   553229707  TTAGTTATATATAGAAATG  553229725

Range 17: 595840319 to 595840291 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 25/29(86%) 0/29(0%) +1/-1
Query            10  CGGTAGCTTGCTGAATATGCTTTAGTTAT  38
                     |||||||||||| | | |||||||| |||
Subject   595840319  CGGTAGCTTGCTAATTCTGCTTTAGCTAT  595840291

Range 18: 688048663 to 688048645 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   688048663  TTAGTTATATATAGAAATG  688048645

Range 19: 695957552 to 695957534 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   695957552  TTAGTTATATATAGAAATG  695957534

Range 20: 705071023 to 705071041 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   705071023  TTAGTTATATATAGAAATG  705071041

Jagger chromosome chr1D

Sequence ID: chr1D_Jagger Length: 493450010 Number of Matches: 30

Range 1: 971125 to 971143 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject      971125  TTAGTTATATATAGAAATG  971143

Range 2: 2307913 to 2307931 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     2307913  TTAGTTATATATAGAAATG  2307931

Range 3: 6376382 to 6376400 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     6376382  TTAGTTATATATAGAAATG  6376400

Range 4: 6408130 to 6408148 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject     6408130  TTAGTTATATATAGAAATG  6408148

Range 5: 9641303 to 9641326 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 22/24(92%) 0/24(0%) +1/+1
Query            13  TAGCTTGCTGAATATGCTTTAGTT  36
                     |||||| ||||||||||||| |||
Subject     9641303  TAGCTTCCTGAATATGCTTTTGTT  9641326

Range 6: 13599216 to 13599198 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    13599216  TTAGTTATATATAGAAATG  13599198

Range 7: 19875705 to 19875723 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    19875705  TTAGTTATATATAGAAATG  19875723

Range 8: 23493486 to 23493504 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    23493486  TTAGTTATATATAGAAATG  23493504

Range 9: 24817860 to 24817842 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    24817860  TTAGTTATATATAGAAATG  24817842

Range 10: 28364886 to 28364904 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    28364886  TTAGTTATATATAGAAATG  28364904

Range 11: 31267685 to 31267667 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    31267685  TTAGTTATATATAGAAATG  31267667

Range 12: 34407911 to 34407893 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    34407911  TTAGTTATATATAGAAATG  34407893

Range 13: 42315232 to 42315250 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    42315232  TTAGTTATATATAGAAATG  42315250

Range 14: 43140696 to 43140714 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    43140696  TTAGTTATATATAGAAATG  43140714

Range 15: 43192667 to 43192685 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    43192667  TTAGTTATATATAGAAATG  43192685

Range 16: 47052730 to 47052712 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    47052730  TTAGTTATATATAGAAATG  47052712

Range 17: 75959590 to 75959572 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject    75959590  TTAGTTATATATAGAAATG  75959572

Range 18: 87770534 to 87770552 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject    87770534  ATGCTTTAGTTATATATAG  87770552

Range 19: 203106550 to 203106532 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   203106550  ATGCTTTAGTTATATATAG  203106532

Range 20: 219274291 to 219274273 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   219274291  ATGCTTTAGTTATATATAG  219274273

Range 21: 221420903 to 221420885 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   221420903  TTAGTTATATATAGAAATG  221420885

Range 22: 319570533 to 319570551 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   319570533  ATGCTTTAGTTATATATAG  319570551

Range 23: 334785851 to 334785869 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   334785851  TTAGTTATATATAGAAATG  334785869

Range 24: 355918444 to 355918462 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   355918444  ATGCTTTAGTTATATATAG  355918462

Range 25: 389568949 to 389568967 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            26  ATGCTTTAGTTATATATAG  44
                     |||||||||||||||||||
Subject   389568949  ATGCTTTAGTTATATATAG  389568967

Range 26: 413454505 to 413454523 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   413454505  TTAGTTATATATAGAAATG  413454523

Range 27: 436207604 to 436207622 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   436207604  TTAGTTATATATAGAAATG  436207622

Range 28: 447520761 to 447520779 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   447520761  TTAGTTATATATAGAAATG  447520779

Range 29: 459893492 to 459893474 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/-1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   459893492  TTAGTTATATATAGAAATG  459893474

Range 30: 461651074 to 461651092 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
35.6 bits(38) 7.8 19/19(100%) 0/19(0%) +1/+1
Query            31  TTAGTTATATATAGAAATG  49
                     |||||||||||||||||||
Subject   461651074  TTAGTTATATATAGAAATG  461651092