This html page seems to have been stripped by Galaxy.
 Disable Galaxy's html sanitization feature to view the full page (see sanitize_all_html in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.

Queries

Query_1: zxx-001 (101 letters, 1 hits)
Query_2: zxx-002 (101 letters, 1 hits)
Query_3: zxx-003 (101 letters, 1 hits)
Query_4: zxx-004 (101 letters, 1 hits)
Query_5: zxx-005 (101 letters, 1 hits)
Query_6: zxx-006 (101 letters, 1 hits)
Query_7: zxx-007 (101 letters, 1 hits)
Query_8: zxx-008 (101 letters, 1 hits)
Query_9: zxx-009 (101 letters, 1 hits)
Query_10: zxx-010 (101 letters, 1 hits)
Query_11: zxx-011 (101 letters, 1 hits)
Query_12: zxx-012 (101 letters, 1 hits)
Query_13: zxx-013 (101 letters, 1 hits)
Query_14: zxx-014 (101 letters, 1 hits)
Query_15: zxx-015 (101 letters, 1 hits)
Query_16: zxx-016 (101 letters, 1 hits)
Query_17: zxx-017 (101 letters, 1 hits)
Query_18: zxx-018 (101 letters, 1 hits)
Query_19: zxx-019 (101 letters, 1 hits)
Query_20: zxx-020 (101 letters, 1 hits)
Query_21: zxx-021 (101 letters, 1 hits)
Query_22: zxx-022 (101 letters, 1 hits)
Query_23: zxx-023 (101 letters, 1 hits)
Query_24: zxx-024 (101 letters, 1 hits)
Query_25: zxx-025 (101 letters, 1 hits)
Query_26: zxx-026 (101 letters, 1 hits)
Query_27: zxx-027 (101 letters, 1 hits)
Query_28: zxx-028 (101 letters, 1 hits)
Query_29: zxx-029 (101 letters, 1 hits)
Query_30: zxx-030 (101 letters, 1 hits)
Query_31: zxx-031 (101 letters, 1 hits)
Query_32: zxx-032 (101 letters, 1 hits)
Query_33: zxx-033 (101 letters, 1 hits)
Query_34: zxx-034 (101 letters, 1 hits)
Query_35: zxx-035 (101 letters, 1 hits)
Query_36: zxx-036 (101 letters, 1 hits)
Query_37: zxx-037 (101 letters, 1 hits)
Query_38: zxx-038 (101 letters, 1 hits)
Query_39: zxx-039 (101 letters, 1 hits)
Query_40: zxx-040 (101 letters, 1 hits)
Query_41: zxx-041 (101 letters, 1 hits)
Query_42: zxx-042 (101 letters, 1 hits)
Query_43: zxx-043 (101 letters, 1 hits)
Query_44: zxx-044 (101 letters, 1 hits)
Query_45: zxx-045 (101 letters, 1 hits)
Query_46: zxx-046 (101 letters, 1 hits)
Query_47: zxx-047 (101 letters, 1 hits)
Query_48: zxx-048 (101 letters, 1 hits)
Query_49: zxx-049 (101 letters, 1 hits)
Query_50: zxx-050 (101 letters, 1 hits)
Query_51: zxx-051 (101 letters, 1 hits)
Query_52: zxx-052 (101 letters, 1 hits)
Query_53: zxx-053 (101 letters, 1 hits)
Query_54: zxx-054 (101 letters, 1 hits)
Query_55: zxx-055 (101 letters, 1 hits)
Query_56: zxx-056 (101 letters, 1 hits)
Query_57: zxx-057 (101 letters, 1 hits)
Query_58: zxx-058 (101 letters, 1 hits)
Query_59: zxx-059 (101 letters, 1 hits)
Query_60: zxx-060 (101 letters, 1 hits)
Query_61: zxx-061 (101 letters, 1 hits)
Query_62: zxx-062 (101 letters, 1 hits)
Query_63: zxx-063 (101 letters, 1 hits)
Query_64: zxx-064 (101 letters, 1 hits)
Query_65: zxx-065 (101 letters, 1 hits)
Query_66: zxx-066 (101 letters, 1 hits)
Query_67: zxx-067 (101 letters, 1 hits)
Query_68: zxx-068 (101 letters, 1 hits)
Query_69: zxx-069 (101 letters, 1 hits)
Query_70: zxx-070 (101 letters, 1 hits)
Query_71: zxx-071 (101 letters, 1 hits)
Query_72: zxx-072 (101 letters, 1 hits)
Query_73: zxx-073 (101 letters, 1 hits)
Query_74: zxx-074 (101 letters, 1 hits)
Query_75: zxx-075 (101 letters, 1 hits)
Query_76: zxx-076 (101 letters, 1 hits)
Query_77: zxx-077 (101 letters, 1 hits)
Query_78: zxx-078 (101 letters, 1 hits)
Query_79: zxx-079 (101 letters, 1 hits)
Query_80: zxx-080 (101 letters, 1 hits)
Query_81: zxx-081 (101 letters, 1 hits)

Nucleotide Sequence (101 letters)

Query number:1
Query ID:Query_1
Definition line:zxx-001
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5182.7 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18273676 to 18273776 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18273676  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTTATGT  18273735
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18273736  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18273776

Range 2: 18210687 to 18210787 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18210687  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18210746
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18210747  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18210787

Range 3: 18232023 to 18232123 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18232023  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18232082
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18232083  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18232123

Range 4: 18238118 to 18238218 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18238118  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18238177
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18238178  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18238218

Range 5: 18240150 to 18240250 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18240150  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18240209
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18240210  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18240250

Range 6: 18278723 to 18278823 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18278723  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18278782
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18278783  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18278823

Range 7: 18282279 to 18282379 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18282279  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18282338
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18282339  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18282379

Range 8: 18289390 to 18289490 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18289390  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18289449
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18289450  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18289490

Range 9: 18291930 to 18292030 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18291930  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18291989
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18291990  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18292030

Range 10: 18297517 to 18297617 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18297517  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18297576
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18297577  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18297617

Range 11: 18320834 to 18320934 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18320834  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18320893
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18320894  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18320934

Range 12: 18335048 to 18335148 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18335048  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18335107
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18335108  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18335148

Range 13: 18349268 to 18349368 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18349268  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18349327
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18349328  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18349368

Range 14: 18351807 to 18351907 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18351807  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18351866
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18351867  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18351907

Range 15: 18352315 to 18352415 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18352315  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18352374
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18352375  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18352415

Range 16: 18357394 to 18357494 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18357394  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18357453
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18357454  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18357494

Range 17: 18362475 to 18362575 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18362475  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18362534
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18362535  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18362575

Range 18: 18464627 to 18464727 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Subject    18464627  AACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTATTAATTCTTCATGT  18464686
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18464687  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18464727

Range 19: 18172634 to 18172734 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18172634  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18172693
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject    18172694  TGTTGGCCTACAGCAGAGGTCCATGCAATACAGATGAATTT  18172734

Range 20: 18175681 to 18175781 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18175681  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18175740
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject    18175741  TGTTGGCCTACAGCAGAGGTCCATGCAATACAGATGAATTT  18175781

Range 21: 18178728 to 18178828 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18178728  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18178787
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject    18178788  TGTTGGCCTACAGCAGAGGTCCATGCAATACAGATGAATTT  18178828

Range 22: 18179236 to 18179336 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||
Subject    18179236  AACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18179295
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18179296  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18179336

Range 23: 18182283 to 18182383 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18182283  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18182342
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject    18182343  TGTTGGCCTACAGCAGAGGTCCATGCAATACAGATGAATTT  18182383

Range 24: 18182791 to 18182891 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||
Subject    18182791  AACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18182850
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18182851  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18182891

Range 25: 18185330 to 18185430 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18185330  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18185389
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject    18185390  TGTTGGCCTACAGCAGAGGTCCATGCAATACAGATGAATTT  18185430

Range 26: 18185838 to 18185938 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||
Subject    18185838  AACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18185897
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18185898  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18185938

Range 27: 18189376 to 18189476 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||
Subject    18189376  AACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18189435
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18189436  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18189476

Range 28: 18191408 to 18191508 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18191408  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18191467
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject    18191468  TGTTGGCCTACAGCAGAGGTCCATGCAATACAGATGAATTT  18191508

Range 29: 18191899 to 18191999 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||
Subject    18191899  AACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18191958
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18191959  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  18191999

Range 30: 18194946 to 18195046 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTAATAATTCTTCATGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Subject    18194946  AACATCTCCGAATGTTGGAATTCTGAAAGCATTGAGGCATAATCTGTTAATTCTTCATGT  18195005
Query            61  TGTTGGCCTACAGCAGAGGTCCATGTAATACAGATGAATTT  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject    18195006  TGTTGGCCTACAGCAGAGGTCCATGCAATACAGATGAATTT  18195046

Nucleotide Sequence (101 letters)

Query number:2
Query ID:Query_2
Definition line:zxx-002
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5024.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18276896 to 18276996 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18276896  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCAACATG  18276955
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18276956  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  18276996

Range 2: 18252544 to 18252644 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18252544  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18252603
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||||||||||| ||||||||||| ||||||||||||
Subject    18252604  CTGAAAACGAAAAATGCCTGTAGTATTTCGATTTTTAAATC  18252644

Range 3: 18279944 to 18280044 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18279944  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18280003
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||||||||||| ||||||||||| ||||||||||||
Subject    18280004  CTGAAAACGAAAAATGCCTGTAGTATTTCGATTTTTAAATC  18280044

Range 4: 18285532 to 18285632 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18285532  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18285591
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||||||||||| ||||||||||| ||||||||||||
Subject    18285592  CTGAAAACGAAAAATGCCTGTAGTATTTCGATTTTTAAATC  18285632

Range 5: 18287054 to 18287154 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18287054  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18287113
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||||||||||| ||||||||||| ||||||||||||
Subject    18287114  CTGAAAACGAAAAATGCCTGTAGTATTTCGATTTTTAAATC  18287154

Range 6: 18301278 to 18301378 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18301278  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18301337
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||||||||||| |||| |||||| ||||||||||||
Subject    18301338  CTGAAAACGAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18301378

Range 7: 18368630 to 18368730 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18368630  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18368689
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| |||||||||||| |||||| ||||||||||||
Subject    18368690  CTGAAAACCAAAAATGTCTGTTGTATTTTGATTTTTAAATC  18368730

Range 8: 18475774 to 18475874 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18475774  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18475833
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| |||||||||||| |||||| ||||||||||||
Subject    18475834  CTGAAAACCAAAAATGTCTGTTGTATTTCGATTTTTAAATC  18475874

Range 9: 18166240 to 18166340 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18166240  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18166299
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18166300  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18166340

Range 10: 18170301 to 18170401 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18170301  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18170360
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18170361  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18170401

Range 11: 18172332 to 18172432 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18172332  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18172391
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18172392  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18172432

Range 12: 18178426 to 18178526 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18178426  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18178485
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18178486  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18178526

Range 13: 18181981 to 18182081 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18181981  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18182040
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18182041  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18182081

Range 14: 18185028 to 18185128 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18185028  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18185087
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18185088  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18185128

Range 15: 18197688 to 18197788 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18197688  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18197747
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18197748  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18197788

Range 16: 18201242 to 18201342 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18201242  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18201301
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18201302  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18201342

Range 17: 18204797 to 18204897 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18204797  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18204856
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18204857  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18204897

Range 18: 18209877 to 18209977 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18209877  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18209936
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18209937  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18209977

Range 19: 18212925 to 18213025 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18212925  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18212984
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18212985  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18213025

Range 20: 18215973 to 18216073 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18215973  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18216032
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18216033  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18216073

Range 21: 18220037 to 18220137 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18220037  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18220096
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18220097  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18220137

Range 22: 18225625 to 18225725 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18225625  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18225684
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18225685  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18225725

Range 23: 18229689 to 18229789 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18229689  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18229748
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18229749  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18229789

Range 24: 18233245 to 18233345 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Subject    18233245  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGACGGGTGCACCATG  18233304
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||||||||||| |||| |||||| ||||||||||||
Subject    18233305  CTGAAAACGAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18233345

Range 25: 18233753 to 18233853 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18233753  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18233812
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18233813  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18233853

Range 26: 18236293 to 18236393 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18236293  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18236352
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18236353  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18236393

Range 27: 18237308 to 18237408 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18237308  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18237367
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18237368  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18237408

Range 28: 18244927 to 18245027 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18244927  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18244986
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18244987  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18245027

Range 29: 18245942 to 18246042 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18245942  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18246001
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18246002  CTGAAAACCAAAAATGCCTGTTGTATTTTGATTTTTAAATC  18246042

Range 30: 18253052 to 18253152 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18253052  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGATGCTCGGCGGGTGCACCATG  18253111
Query            61  CTGAAAACGAAAAATGTCTGTAGTATTTGGATTTTTAAATC  101
                     |||||||| ||||||| |||| |||||| ||||||||||||
Subject    18253112  CTGAAAACCAAAAATGCCTGTTGTATTTCGATTTTTAAATC  18253152

Nucleotide Sequence (101 letters)

Query number:3
Query ID:Query_3
Definition line:zxx-003
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5367.5 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18166508 to 18166608 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18166508  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18166567
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18166568  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18166608

Range 2: 18167523 to 18167623 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18167523  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18167582
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18167583  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18167623

Range 3: 18168031 to 18168131 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18168031  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18168090
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18168091  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18168131

Range 4: 18168539 to 18168639 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18168539  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18168598
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18168599  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18168639

Range 5: 18170061 to 18170161 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18170061  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18170120
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18170121  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18170161

Range 6: 18170569 to 18170669 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18170569  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18170628
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18170629  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18170669

Range 7: 18172600 to 18172700 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18172600  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18172659
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18172660  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18172700

Range 8: 18173108 to 18173208 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18173108  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18173167
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18173168  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18173208

Range 9: 18173616 to 18173716 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18173616  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18173675
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18173676  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18173716

Range 10: 18174124 to 18174224 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18174124  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18174183
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18174184  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18174224

Range 11: 18175139 to 18175239 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18175139  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18175198
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18175199  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18175239

Range 12: 18175647 to 18175747 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18175647  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18175706
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18175707  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18175747

Range 13: 18176663 to 18176763 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18176663  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18176722
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18176723  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18176763

Range 14: 18177678 to 18177778 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18177678  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18177737
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18177738  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18177778

Range 15: 18178694 to 18178794 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18178694  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18178753
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18178754  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18178794

Range 16: 18179710 to 18179810 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18179710  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18179769
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18179770  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18179810

Range 17: 18180218 to 18180318 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18180218  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18180277
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18180278  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18180318

Range 18: 18181233 to 18181333 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18181233  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18181292
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18181293  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18181333

Range 19: 18182249 to 18182349 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18182249  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18182308
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18182309  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18182349

Range 20: 18184280 to 18184380 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18184280  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18184339
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18184340  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18184380

Range 21: 18185296 to 18185396 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18185296  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18185355
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18185356  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18185396

Range 22: 18187327 to 18187427 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18187327  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18187386
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18187387  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18187427

Range 23: 18188343 to 18188443 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18188343  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18188402
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18188403  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18188443

Range 24: 18188851 to 18188951 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18188851  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18188910
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18188911  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18188951

Range 25: 18189850 to 18189950 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18189850  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18189909
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18189910  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18189950

Range 26: 18190358 to 18190458 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18190358  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18190417
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18190418  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18190458

Range 27: 18191374 to 18191474 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18191374  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18191433
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18191434  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18191474

Range 28: 18192373 to 18192473 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18192373  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18192432
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18192433  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18192473

Range 29: 18192881 to 18192981 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18192881  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18192940
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18192941  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18192981

Range 30: 18193896 to 18193996 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTGAAAGAGTGCCATCTTCTGCACCCACAAAAGAACATCTCCGAATGTTGGAATTCTGA  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject    18193896  ACTGAAAGAGTGCCATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTCTGA  18193955
Query            61  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18193956  AAGCATTGAGGCATAATCTGTTAATTCTTCATGTTGTTGGC  18193996

Nucleotide Sequence (101 letters)

Query number:4
Query ID:Query_4
Definition line:zxx-004
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5322.5 100% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18320433 to 18320533 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18320433  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18320492
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18320493  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18320533

Range 2: 18165633 to 18165733 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18165633  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18165692
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18165693  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18165733

Range 3: 18211810 to 18211910 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18211810  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18211869
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18211870  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18211910

Range 4: 18213842 to 18213942 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18213842  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18213901
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18213902  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18213942

Range 5: 18246859 to 18246959 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18246859  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18246918
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18246919  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18246959

Range 6: 18249906 to 18250006 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18249906  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18249965
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18249966  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18250006

Range 7: 18268704 to 18268804 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18268704  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18268763
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18268764  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18268804

Range 8: 18273783 to 18273883 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18273783  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18273842
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18273843  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18273883

Range 9: 18275275 to 18275375 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18275275  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18275334
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18275335  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18275375

Range 10: 18295592 to 18295692 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18295592  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18295651
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18295652  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18295692

Range 11: 18297624 to 18297724 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18297624  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18297683
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18297684  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18297724

Range 12: 18299148 to 18299248 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18299148  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18299207
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18299208  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18299248

Range 13: 18308291 to 18308391 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18308291  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18308350
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18308351  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18308391

Range 14: 18318909 to 18319009 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18318909  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTGACGT  18318968
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18318969  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18319009

Range 15: 18332617 to 18332717 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18332617  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18332676
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18332677  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18332717

Range 16: 18344804 to 18344904 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18344804  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18344863
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18344864  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18344904

Range 17: 18351914 to 18352014 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18351914  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18351973
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18351974  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18352014

Range 18: 18357501 to 18357601 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18357501  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18357560
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18357561  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18357601

Range 19: 18362582 to 18362682 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18362582  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18362641
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18362642  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18362682

Range 20: 18210794 to 18210894 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18210794  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18210853
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||| ||||||||||||||||||
Subject    18210854  GCGCGATGGCTTTGTGTCTCATTATATAACTATAACGCCAA  18210894

Range 21: 18220954 to 18221054 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| 
Subject    18220954  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGA  18221013
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18221014  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18221054

Range 22: 18224002 to 18224102 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18224002  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18224061
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||| ||||
Subject    18224062  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACTCCAA  18224102

Range 23: 18228066 to 18228166 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18228066  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18228125
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||| ||||
Subject    18228126  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACTCCAA  18228166

Range 24: 18230606 to 18230706 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| 
Subject    18230606  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGA  18230665
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18230666  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18230706

Range 25: 18232130 to 18232230 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    18232130  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18232189
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||| ||||
Subject    18232190  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACTCCAA  18232230

Range 26: 18238225 to 18238325 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Subject    18238225  AACTTTTTGAGGCGGTCATTGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18238284
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18238285  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18238325

Range 27: 18240257 to 18240357 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Subject    18240257  AACTTTTTGAGGCGGTCATTGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18240316
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18240317  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18240357

Range 28: 18271751 to 18271851 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Subject    18271751  AACTTTTTGAGGCGGTCAATGGACAAAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18271810
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18271811  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18271851

Range 29: 18280861 to 18280961 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| 
Subject    18280861  AACTTTTTGAGGCGGTCAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGA  18280920
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18280921  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18280961

Range 30: 18304737 to 18304837 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AACTTTTTGAGGCGGTGAATGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  60
                     |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Subject    18304737  AACTTTTTGAGGCGGTCATTGGACAGAAATCGGTAAAGAAGGGGGATATACACTTTACGT  18304796
Query            61  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18304797  GCGCGATGGCTTTGTGTCTCATGATATAACTATAACGCCAA  18304837

Nucleotide Sequence (101 letters)

Query number:5
Query ID:Query_5
Definition line:zxx-005
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5241.3 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18339100 to 18339200 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18339100  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATTTGTT  18339159
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18339160  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  18339200

Range 2: 18340622 to 18340722 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18340622  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  18340681
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||| ||||||||||||||||||
Subject    18340682  AATTCTTCATGTTGTTGGCCTAAATCGGAGGTCCATGCAAT  18340722

Range 3: 18166022 to 18166122 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18166022  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18166081
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18166082  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18166122

Range 4: 18172114 to 18172214 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18172114  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18172173
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18172174  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18172214

Range 5: 18178208 to 18178308 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18178208  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18178267
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18178268  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18178308

Range 6: 18183287 to 18183387 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18183287  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18183346
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18183347  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18183387

Range 7: 18186334 to 18186434 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18186334  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18186393
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18186394  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18186434

Range 8: 18187857 to 18187957 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18187857  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18187916
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18187917  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18187957

Range 9: 18190888 to 18190988 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18190888  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18190947
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18190948  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18190988

Range 10: 18194426 to 18194526 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18194426  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18194485
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18194486  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18194526

Range 11: 18197473 to 18197573 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18197473  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18197532
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18197533  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18197573

Range 12: 18199501 to 18199601 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18199501  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18199560
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18199561  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18199601

Range 13: 18201024 to 18201124 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18201024  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18201083
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18201084  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18201124

Range 14: 18203056 to 18203156 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18203056  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18203115
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18203116  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18203156

Range 15: 18204579 to 18204679 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18204579  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18204638
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18204639  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18204679

Range 16: 18207627 to 18207727 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18207627  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18207686
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18207687  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18207727

Range 17: 18208135 to 18208235 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18208135  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18208194
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18208195  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18208235

Range 18: 18209151 to 18209251 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18209151  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18209210
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18209211  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18209251

Range 19: 18209659 to 18209759 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18209659  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18209718
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18209719  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18209759

Range 20: 18211691 to 18211791 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18211691  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18211750
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18211751  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18211791

Range 21: 18212707 to 18212807 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18212707  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18212766
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18212767  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18212807

Range 22: 18215755 to 18215855 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18215755  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18215814
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18215815  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18215855

Range 23: 18218803 to 18218903 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18218803  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18218862
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18218863  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18218903

Range 24: 18219819 to 18219919 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18219819  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18219878
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18219879  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18219919

Range 25: 18221851 to 18221951 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18221851  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18221910
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18221911  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18221951

Range 26: 18222867 to 18222967 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18222867  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18222926
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18222927  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18222967

Range 27: 18225915 to 18226015 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18225915  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18225974
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18225975  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18226015

Range 28: 18226931 to 18227031 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject    18226931  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCATAATCTGTT  18226990
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    18226991  AATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18227031

Range 29: 18236075 to 18236175 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18236075  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  18236134
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                      ||||||||||||||||||||||||| ||||||||||||||
Subject    18236135  TATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18236175

Range 30: 18239630 to 18239730 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18239630  CACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAATGCATTGAGGCATAATCTGTT  18239689
Query            61  AATTCTTCATGTTGTTGGCCTACATCGGAGGTCCATGCAAT  101
                      ||||||||||||||||||||||||| ||||||||||||||
Subject    18239690  TATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAAT  18239730

Nucleotide Sequence (101 letters)

Query number:6
Query ID:Query_6
Definition line:zxx-006
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5334.2 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18290171 to 18290271 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18290171  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18290230
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18290231  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18290271

Range 2: 18365287 to 18365387 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18365287  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18365346
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18365347  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18365387

Range 3: 18365795 to 18365895 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18365795  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18365854
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18365855  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18365895

Range 4: 18370080 to 18370180 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18370080  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18370139
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18370140  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18370180

Range 5: 18383667 to 18383767 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18383667  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18383726
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18383727  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18383767

Range 6: 18388748 to 18388848 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18388748  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18388807
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18388808  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18388848

Range 7: 18389256 to 18389356 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18389256  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18389315
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18389316  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18389356

Range 8: 18392812 to 18392912 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18392812  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18392871
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18392872  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18392912

Range 9: 18396876 to 18396976 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18396876  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18396935
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18396936  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18396976

Range 10: 18397384 to 18397484 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18397384  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18397443
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18397444  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18397484

Range 11: 18398400 to 18398500 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18398400  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18398459
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18398460  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18398500

Range 12: 18401956 to 18402056 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18401956  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18402015
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18402016  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18402056

Range 13: 18403986 to 18404086 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18403986  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18404045
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18404046  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18404086

Range 14: 18404494 to 18404594 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18404494  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18404553
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18404554  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18404594

Range 15: 18405002 to 18405102 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18405002  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18405061
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18405062  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18405102

Range 16: 18408558 to 18408658 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18408558  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18408617
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18408618  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18408658

Range 17: 18410589 to 18410689 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18410589  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18410648
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18410649  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18410689

Range 18: 18411097 to 18411197 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18411097  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18411156
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18411157  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18411197

Range 19: 18411605 to 18411705 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18411605  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18411664
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18411665  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18411705

Range 20: 18422774 to 18422874 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18422774  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18422833
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18422834  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18422874

Range 21: 18426329 to 18426429 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18426329  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18426388
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18426389  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18426429

Range 22: 18427357 to 18427457 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18427357  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18427416
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18427417  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18427457

Range 23: 18368192 to 18368291 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             2  AAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGCT  61
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject    18368192  AAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCT  18368251
Query            62  ACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    18368252  ACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  18368291

Range 24: 18180018 to 18180118 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18180018  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18180077
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    18180078  TACCTTTTAGCTCCCATTTAACACACCAAACTTTGACTTCC  18180118

Range 25: 18190158 to 18190258 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18190158  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18190217
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    18190218  TACCTTTTAGCTCCCATTTAACACACCAAACTTTGACTTCC  18190258

Range 26: 18192681 to 18192781 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18192681  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18192740
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    18192741  TACCTTTTAGCTCCCATTTAACACACCAAACTTTGACTTCC  18192781

Range 27: 18199787 to 18199887 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18199787  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18199846
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    18199847  TACCTTTTAGCTCCCATTTAACACACCAAACTTTGACTTCC  18199887

Range 28: 18230773 to 18230873 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18230773  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18230832
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    18230833  TACCTTTTAGCTCCCATTTAACACACCAAACTTTGACTTCC  18230873

Range 29: 18231281 to 18231381 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18231281  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18231340
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    18231341  TACCTTTTAGCTCCCATTTAACACACCAAACTTTGACTTCC  18231381

Range 30: 18247534 to 18247634 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCGCTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18247534  CAAAAATGCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGC  18247593
Query            61  TACCTTTTAGCTCCCATTTAACACACCAAACTCTGACTTCC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    18247594  TACCTTTTAGCTCCCATTTAACACACCAAACTTTGACTTCC  18247634

Nucleotide Sequence (101 letters)

Query number:7
Query ID:Query_7
Definition line:zxx-007
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5367.5 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18225565 to 18225665 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18225565  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18225624
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18225625  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18225665

Range 2: 18229629 to 18229729 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18229629  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18229688
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18229689  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18229729

Range 3: 18233185 to 18233285 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18233185  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18233244
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18233245  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18233285

Range 4: 18233693 to 18233793 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18233693  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18233752
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18233753  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18233793

Range 5: 18235725 to 18235825 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18235725  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18235784
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18235785  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18235825

Range 6: 18236233 to 18236333 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18236233  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18236292
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18236293  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18236333

Range 7: 18236740 to 18236840 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18236740  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18236799
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18236800  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18236840

Range 8: 18237248 to 18237348 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18237248  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18237307
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18237308  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18237348

Range 9: 18239280 to 18239380 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18239280  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18239339
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18239340  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18239380

Range 10: 18241312 to 18241412 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18241312  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18241371
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18241372  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18241412

Range 11: 18242327 to 18242427 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18242327  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18242386
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18242387  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18242427

Range 12: 18242835 to 18242935 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18242835  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18242894
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18242895  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18242935

Range 13: 18244359 to 18244459 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18244359  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18244418
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18244419  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18244459

Range 14: 18244867 to 18244967 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18244867  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18244926
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18244927  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18244967

Range 15: 18245374 to 18245474 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18245374  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18245433
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18245434  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18245474

Range 16: 18245882 to 18245982 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18245882  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18245941
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18245942  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18245982

Range 17: 18248422 to 18248522 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18248422  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18248481
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18248482  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18248522

Range 18: 18248929 to 18249029 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18248929  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18248988
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18248989  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18249029

Range 19: 18252484 to 18252584 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18252484  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18252543
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18252544  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18252584

Range 20: 18252992 to 18253092 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18252992  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18253051
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18253052  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18253092

Range 21: 18255533 to 18255633 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18255533  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18255592
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18255593  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18255633

Range 22: 18256041 to 18256141 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18256041  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18256100
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18256101  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18256141

Range 23: 18256548 to 18256648 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18256548  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18256607
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18256608  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18256648

Range 24: 18259089 to 18259189 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18259089  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18259148
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18259149  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18259189

Range 25: 18259597 to 18259697 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18259597  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18259656
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18259657  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18259697

Range 26: 18260104 to 18260204 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18260104  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18260163
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18260164  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18260204

Range 27: 18261121 to 18261221 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18261121  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18261180
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18261181  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18261221

Range 28: 18261628 to 18261728 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18261628  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18261687
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18261688  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18261728

Range 29: 18270266 to 18270366 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18270266  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18270325
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18270326  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18270366

Range 30: 18270775 to 18270875 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAAAGCC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Subject    18270775  AGGGGGATATACACTTTACGAGCGTGATGGCTTTGTGTCTCATGATATAACTATAACGCC  18270834
Query            61  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18270835  AAAAGATATCTCTTGATTTTCTGAAAGCATGCACCGCAGAT  18270875

Nucleotide Sequence (101 letters)

Query number:8
Query ID:Query_8
Definition line:zxx-008
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5245.8 100% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18429494 to 18429594 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18429494  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  18429553
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18429554  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18429594

Range 2: 18416277 to 18416377 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    18416277  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTATAAAATTTCATTAAGTTCACACGA  18416336
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18416337  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18416377

Range 3: 18207002 to 18207102 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    18207002  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTATAAAATTTCATTAAGTTCACACGA  18207061
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject    18207062  AAGGTTCGGGTTAGGAGCATGAGTTTGTCACTGAAACTGAA  18207102

Range 4: 18212082 to 18212182 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18212082  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18212141
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18212142  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18212182

Range 5: 18243068 to 18243168 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    18243068  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTATAAAATTTCATTAAGTTCACACGA  18243127
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject    18243128  AAGGTTCGGGTTAGGAGCATGAGTTTGTCACTGAAACTGAA  18243168

Range 6: 18246115 to 18246215 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    18246115  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTATAAAATTTCATTAAGTTCACACGA  18246174
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject    18246175  AAGGTTCGGGTTAGGAGCATGAGTTTGTCACTGAAACTGAA  18246215

Range 7: 18275039 to 18275139 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    18275039  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTATAAAATTTCATTAAGTTCACACGA  18275098
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject    18275099  AAGGTTCGGGTTAGGAGCATGAGTTTGTCACTGAAACTGAA  18275139

Range 8: 18298912 to 18299012 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    18298912  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTATAAAATTTCATTAAGTTCACACGA  18298971
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject    18298972  AAGGTTCGGGTTAGGAGCATGAGTTTGTCACTGAAACTGAA  18299012

Range 9: 18344568 to 18344668 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18344568  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18344627
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18344628  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18344668

Range 10: 18345076 to 18345176 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18345076  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18345135
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18345136  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18345176

Range 11: 18346091 to 18346191 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18346091  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18346150
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18346151  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18346191

Range 12: 18351170 to 18351270 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18351170  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18351229
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18351230  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18351270

Range 13: 18351678 to 18351778 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18351678  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18351737
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18351738  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18351778

Range 14: 18360314 to 18360414 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18360314  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18360373
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18360374  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18360414

Range 15: 18361838 to 18361938 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18361838  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18361897
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18361898  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18361938

Range 16: 18372073 to 18372173 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18372073  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18372132
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18372133  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18372173

Range 17: 18373962 to 18374062 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18373962  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18374021
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18374022  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18374062

Range 18: 18377962 to 18378062 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18377962  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18378021
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18378022  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18378062

Range 19: 18379851 to 18379951 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18379851  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18379910
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18379911  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18379951

Range 20: 18381740 to 18381840 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18381740  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18381799
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18381800  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18381840

Range 21: 18385804 to 18385904 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18385804  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18385863
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18385864  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18385904

Range 22: 18399013 to 18399113 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18399013  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18399072
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18399073  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18399113

Range 23: 18400029 to 18400129 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18400029  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18400088
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18400089  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18400129

Range 24: 18412217 to 18412317 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    18412217  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTATAAAATTTCATTAAGTTCACACGA  18412276
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||| ||
Subject    18412277  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTAAA  18412317

Range 25: 18414753 to 18414853 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    18414753  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTATAAAATTTCATTAAGTTCACACGA  18414812
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||| ||
Subject    18414813  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTAAA  18414853

Range 26: 18431018 to 18431118 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18431018  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18431077
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18431078  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18431118

Range 27: 18478765 to 18478865 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18478765  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18478824
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18478825  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18478865

Range 28: 18479273 to 18479373 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18479273  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18479332
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18479333  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18479373

Range 29: 18479781 to 18479881 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18479781  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18479840
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18479841  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18479881

Range 30: 18480797 to 18480897 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACAATAAAATTTCATTAAGTTCACACGA  60
                     ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18480797  TCTTTTGACTCTGGTGATGCATTGAGTTTTTAACTGTAAAATTTCATTAAGTTCACACGA  18480856
Query            61  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18480857  AAGGTTCGGGTTAGGAGCATGAGTTTGTCTCTGAAACTGAA  18480897

Nucleotide Sequence (101 letters)

Query number:9
Query ID:Query_9
Definition line:zxx-009
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5244.0 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18428888 to 18428988 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18428888  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACGTTT  18428947
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18428948  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18428988

Range 2: 18430412 to 18430512 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18430412  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACGTTT  18430471
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18430472  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18430512

Range 3: 18429397 to 18429496 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             2  CCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTTT  61
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject    18429397  CCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACGTTTT  18429456
Query            62  AGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    18429457  AGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18429496

Range 4: 18180025 to 18180125 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18180025  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18180084
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18180085  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18180125

Range 5: 18190165 to 18190265 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18190165  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18190224
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18190225  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18190265

Range 6: 18192688 to 18192788 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18192688  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18192747
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18192748  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18192788

Range 7: 18199794 to 18199894 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18199794  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18199853
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18199854  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18199894

Range 8: 18225192 to 18225292 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18225192  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18225251
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18225252  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18225292

Range 9: 18229256 to 18229356 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18229256  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18229315
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18229316  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18229356

Range 10: 18230780 to 18230880 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18230780  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18230839
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18230840  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18230880

Range 11: 18231288 to 18231388 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18231288  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18231347
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18231348  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18231388

Range 12: 18247541 to 18247641 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18247541  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18247600
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18247601  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18247641

Range 13: 18250588 to 18250688 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18250588  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18250647
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18250648  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18250688

Range 14: 18252112 to 18252212 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18252112  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18252171
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18252172  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18252212

Range 15: 18255160 to 18255260 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18255160  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18255219
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18255220  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18255260

Range 16: 18255668 to 18255768 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18255668  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18255727
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18255728  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18255768

Range 17: 18258716 to 18258816 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18258716  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18258775
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18258776  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18258816

Range 18: 18259224 to 18259324 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18259224  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18259283
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18259284  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18259324

Range 19: 18259732 to 18259832 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18259732  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18259791
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18259792  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18259832

Range 20: 18264813 to 18264913 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18264813  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18264872
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18264873  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18264913

Range 21: 18265321 to 18265421 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18265321  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18265380
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18265381  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18265421

Range 22: 18272941 to 18273041 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Subject    18272941  GCCTGTTGTATTTCGATTTTTAAATCAGATGTGTATGTGCCATGCTTCCCTGCTACGTTT  18273000
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18273001  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18273041

Range 23: 18273449 to 18273549 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18273449  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18273508
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18273509  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18273549

Range 24: 18274465 to 18274565 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Subject    18274465  GCCTGTTGTATTTCGATTTTTAAATCAGATGTGTATGTGCCATGCTTCCCTGCTACGTTT  18274524
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18274525  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18274565

Range 25: 18276464 to 18276564 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18276464  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18276523
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18276524  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18276564

Range 26: 18279004 to 18279104 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18279004  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18279063
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18279064  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18279104

Range 27: 18279512 to 18279612 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18279512  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18279571
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18279572  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18279612

Range 28: 18280527 to 18280627 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18280527  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18280586
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18280587  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18280627

Range 29: 18283067 to 18283167 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18283067  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18283126
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18283127  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18283167

Range 30: 18283575 to 18283675 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTATGTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    18283575  GCCTGTTGTATTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTT  18283634
Query            61  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18283635  TAGCTCCCATTTAACACACCAAACTTTGACTTCCTTTTTCT  18283675

Nucleotide Sequence (101 letters)

Query number:10
Query ID:Query_10
Definition line:zxx-010
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5502.8 100% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18166013 to 18166113 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18166013  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18166072
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18166073  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18166113

Range 2: 18172105 to 18172205 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18172105  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18172164
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18172165  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18172205

Range 3: 18178199 to 18178299 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18178199  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18178258
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18178259  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18178299

Range 4: 18183278 to 18183378 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18183278  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18183337
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18183338  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18183378

Range 5: 18186325 to 18186425 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18186325  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18186384
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18186385  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18186425

Range 6: 18187848 to 18187948 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18187848  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18187907
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18187908  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18187948

Range 7: 18190879 to 18190979 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18190879  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18190938
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18190939  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18190979

Range 8: 18194417 to 18194517 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18194417  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18194476
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18194477  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18194517

Range 9: 18197464 to 18197564 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18197464  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18197523
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18197524  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18197564

Range 10: 18199492 to 18199592 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18199492  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18199551
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18199552  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18199592

Range 11: 18201015 to 18201115 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18201015  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18201074
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18201075  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18201115

Range 12: 18203047 to 18203147 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18203047  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18203106
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18203107  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18203147

Range 13: 18204570 to 18204670 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18204570  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18204629
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18204630  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18204670

Range 14: 18207618 to 18207718 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18207618  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18207677
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18207678  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18207718

Range 15: 18208126 to 18208226 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18208126  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18208185
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18208186  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18208226

Range 16: 18209142 to 18209242 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18209142  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18209201
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18209202  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18209242

Range 17: 18209650 to 18209750 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18209650  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18209709
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18209710  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18209750

Range 18: 18211682 to 18211782 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18211682  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18211741
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18211742  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18211782

Range 19: 18212698 to 18212798 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18212698  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18212757
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18212758  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18212798

Range 20: 18215746 to 18215846 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18215746  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18215805
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18215806  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18215846

Range 21: 18218794 to 18218894 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18218794  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18218853
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18218854  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18218894

Range 22: 18219810 to 18219910 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18219810  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18219869
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18219870  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18219910

Range 23: 18221842 to 18221942 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18221842  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18221901
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18221902  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18221942

Range 24: 18222858 to 18222958 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18222858  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18222917
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18222918  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18222958

Range 25: 18225906 to 18226006 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18225906  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18225965
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18225966  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18226006

Range 26: 18226922 to 18227022 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18226922  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18226981
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18226982  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18227022

Range 27: 18247239 to 18247339 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18247239  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18247298
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18247299  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18247339

Range 28: 18247747 to 18247847 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18247747  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18247806
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18247807  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18247847

Range 29: 18250286 to 18250386 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18250286  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18250345
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18250346  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18250386

Range 30: 18253334 to 18253434 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18253334  CATCTTCTGCACCAACAAAAGAACATCTCCGAATGTTGGAATTTTGAAAGCATTGAGGCA  18253393
Query            61  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18253394  TAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGT  18253434

Nucleotide Sequence (101 letters)

Query number:11
Query ID:Query_11
Definition line:zxx-011
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5372.0 100% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18453506 to 18453606 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    18453506  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  18453565
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18453566  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18453606

Range 2: 18166067 to 18166167 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18166067  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18166126
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18166127  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18166167

Range 3: 18166575 to 18166675 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18166575  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18166634
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18166635  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18166675

Range 4: 18167082 to 18167182 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18167082  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18167141
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18167142  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18167182

Range 5: 18168098 to 18168198 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18168098  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18168157
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18168158  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18168198

Range 6: 18168606 to 18168706 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18168606  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18168665
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18168666  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18168706

Range 7: 18170128 to 18170228 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18170128  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18170187
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18170188  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18170228

Range 8: 18170636 to 18170736 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18170636  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18170695
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18170696  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18170736

Range 9: 18172159 to 18172259 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18172159  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18172218
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18172219  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18172259

Range 10: 18173175 to 18173275 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18173175  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18173234
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18173235  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18173275

Range 11: 18173683 to 18173783 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18173683  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18173742
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18173743  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18173783

Range 12: 18174191 to 18174291 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18174191  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18174250
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18174251  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18174291

Range 13: 18176730 to 18176830 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18176730  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18176789
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18176790  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18176830

Range 14: 18177745 to 18177845 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18177745  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18177804
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18177805  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18177845

Range 15: 18179777 to 18179877 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18179777  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18179836
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18179837  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18179877

Range 16: 18180285 to 18180385 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18180285  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18180344
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18180345  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18180385

Range 17: 18181300 to 18181400 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18181300  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18181359
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18181360  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18181400

Range 18: 18183332 to 18183432 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18183332  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18183391
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18183392  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18183432

Range 19: 18184347 to 18184447 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18184347  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18184406
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18184407  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18184447

Range 20: 18186379 to 18186479 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18186379  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18186438
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18186439  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18186479

Range 21: 18187394 to 18187494 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18187394  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18187453
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18187454  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18187494

Range 22: 18189917 to 18190017 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18189917  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18189976
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18189977  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18190017

Range 23: 18190425 to 18190525 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18190425  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18190484
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18190485  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18190525

Range 24: 18192440 to 18192540 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18192440  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18192499
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18192500  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18192540

Range 25: 18192948 to 18193048 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18192948  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18193007
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18193008  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18193048

Range 26: 18193963 to 18194063 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18193963  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18194022
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18194023  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18194063

Range 27: 18197010 to 18197110 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18197010  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18197069
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18197070  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18197110

Range 28: 18197518 to 18197618 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18197518  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18197577
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18197578  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18197618

Range 29: 18198022 to 18198122 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18198022  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18198081
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18198082  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18198122

Range 30: 18199546 to 18199646 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAACACAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18199546  GAGGCATAATCTGTTAATTCTTCATGTTGTTGGCCTACATCAGAGGTCCATGCAATACAG  18199605
Query            61  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18199606  ATGAATTTGCATCTAACTTTTTGAGGCGGTCAATGGACAGA  18199646

Nucleotide Sequence (101 letters)

Query number:12
Query ID:Query_12
Definition line:zxx-012
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4778.7 119% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18454272 to 18454372 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18454272  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18454331
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGATCGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18454332  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGATCGGT  18454372

Range 2: 18441078 to 18441179 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18441078  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18441137
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18441138  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18441179

Range 3: 18444122 to 18444223 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18444122  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18444181
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18444182  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18444223

Range 4: 18445136 to 18445237 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18445136  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18445195
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18445196  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18445237

Range 5: 18418729 to 18418830 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18418729  TTTTGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18418788
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18418789  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18418830

Range 6: 18421268 to 18421369 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18421268  TTTTGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18421327
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18421328  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18421369

Range 7: 18432453 to 18432554 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||
Subject    18432453  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGGTCCCAT  18432512
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18432513  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18432554

Range 8: 18438541 to 18438642 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18438541  TTTTGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18438600
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18438601  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18438642

Range 9: 18446151 to 18446252 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18446151  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18446210
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||| ||||||||||||||| |||||
Subject    18446211  TTAACACACCAAACTTTGACCTCCTTTTTCTTTTGACTCGGT  18446252

Range 10: 18447166 to 18447267 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18447166  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18447225
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||| ||||||||||||||| |||||
Subject    18447226  TTAACACACCAAACTTTGACCTCCTTTTTCTTTTGACTCGGT  18447267

Range 11: 18448690 to 18448791 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18448690  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18448749
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||| ||||||||||||||| |||||
Subject    18448750  TTAACACACCAAACTTTGACCTCCTTTTTCTTTTGACTCGGT  18448791

Range 12: 18450212 to 18450313 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18450212  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18450271
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||| ||||||||||||||| |||||
Subject    18450272  TTAACACACCAAACTTTGACCTCCTTTTTCTTTTGACTCGGT  18450313

Range 13: 18451735 to 18451836 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18451735  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18451794
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||| ||||||||||||||| |||||
Subject    18451795  TTAACACACCAAACTTTGACCTCCTTTTTCTTTTGACTCGGT  18451836

Range 14: 18452750 to 18452851 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18452750  TTTTGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18452809
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18452810  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18452851

Range 15: 18463903 to 18464004 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||
Subject    18463903  TTTTGATTTTTATATCAGAAGTGTATGTGTCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18463962
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18463963  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18464004

Range 16: 18465426 to 18465527 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18465426  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18465485
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     ||||||||||||| |||||||||||||||||||||| |||||
Subject    18465486  TTAACACACCAAAATTTGACTTCCTTTTTCTTTTGACTCGGT  18465527

Range 17: 18466949 to 18467050 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||
Subject    18466949  TTTTGATTTTTATATCAGAAGTGTATGTGTCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18467008
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18467009  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18467050

Range 18: 18469995 to 18470096 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||
Subject    18469995  TTTTGATTTTTATATCAGAAGTGTATGTGTCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18470054
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18470055  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18470096

Range 19: 18473041 to 18473142 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18473041  TTTTGATTTTTTTATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18473100
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||||||||||||||||||| |||||
Subject    18473101  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGACTCGGT  18473142

Range 20: 18476874 to 18476975 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18476874  TTTTGATTTTTATATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18476933
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA-TCGGT  102
                     |||||||||||||||||||| ||||||||||||||| |||||
Subject    18476934  TTAACACACCAAACTTTGACCTCCTTTTTCTTTTGACTCGGT  18476975

Range 21: 18171909 to 18172004 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Subject    18171909  TTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  18171968
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18171969  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18172004

Range 22: 18175464 to 18175559 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Subject    18175464  TTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  18175523
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18175524  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18175559

Range 23: 18181558 to 18181653 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Subject    18181558  TTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  18181617
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18181618  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18181653

Range 24: 18183590 to 18183685 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18183590  TTTTGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18183649
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18183650  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18183685

Range 25: 18184605 to 18184700 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Subject    18184605  TTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  18184664
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18184665  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18184700

Range 26: 18186637 to 18186732 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||
Subject    18186637  TTTTGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTCCCAT  18186696
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18186697  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18186732

Range 27: 18187652 to 18187747 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Subject    18187652  TTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  18187711
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18187712  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18187747

Range 28: 18197268 to 18197363 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Subject    18197268  TTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  18197327
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18197328  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18197363

Range 29: 18200819 to 18200914 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Subject    18200819  TTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  18200878
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18200879  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18200914

Range 30: 18204374 to 18204469 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  TTTTGATTTTTATATCAGAAGTTTATCTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  60
                     ||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||
Subject    18204374  TTTCGATTTTTAAATCAGAAGTGTATGTGCCATGCTTCCCTGCTACCTTTTAGCTGCCAT  18204433
Query            61  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  96
                     ||||||||||||||||||||||||||||||||||||
Subject    18204434  TTAACACACCAAACTTTGACTTCCTTTTTCTTTTGA  18204469

Nucleotide Sequence (101 letters)

Query number:13
Query ID:Query_13
Definition line:zxx-013
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4970.8 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18504888 to 18504988 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18504888  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCATAGT  18504947
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18504948  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  18504988

Range 2: 27754485 to 27754585 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||
Subject    27754485  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTGCTTTGCTTATTGCGCCGT  27754544
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    27754545  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  27754585

Range 3: 30384377 to 30384277 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject    30384377  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  30384318
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    30384317  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  30384277

Range 4: 454617558 to 454617658 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Subject   454617558  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGTCGT  454617617
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||| ||||||||||||||||||||||||||||||||
Subject   454617618  AACCATGGGTAATCTTCATCGTTTATCAGGATGCTTGGGTC  454617658

Range 5: 492397631 to 492397531 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   492397631  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  492397572
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   492397571  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  492397531

Range 6: 492406548 to 492406448 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   492406548  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  492406489
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   492406488  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  492406448

Range 7: 494271448 to 494271348 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   494271448  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  494271389
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   494271388  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  494271348

Range 8: 463064858 to 463064759 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 97/100(97%) 0/100(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||
Subject   463064858  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTGCTTTGCTTATTGCGCCGT  463064799
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject   463064798  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGT  463064759

Range 9: 4802973 to 4803073 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject     4802973  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  4803032
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     4803033  AACCATGGATAATCTTCATCGTTTATCACGATGCTTGGGTC  4803073

Range 10: 14193539 to 14193639 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| || |||||||||||||||||||||||  ||
Subject    14193539  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTTGCTTGTGTCCTTTGCTTATTGCGCCGT  14193598
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    14193599  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  14193639

Range 11: 23511780 to 23511680 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  ||
Subject    23511780  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCTTTTGCTTATTGCGCCGT  23511721
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    23511720  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  23511680

Range 12: 24747350 to 24747250 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject    24747350  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  24747291
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    24747290  AACCATGGATAATCTTCATCGTTTATCAGGATACTTGGGTC  24747250

Range 13: 35781786 to 35781886 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject    35781786  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  35781845
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||| ||||||||||||||||||||||||
Subject    35781846  AACCATGGATAATCTTTATCGTTTATCAGGATGCTTGGGTC  35781886

Range 14: 49341927 to 49342027 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  ||
Subject    49341927  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCATTTGCTTATTGCGCCGT  49341986
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    49341987  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  49342027

Range 15: 69004248 to 69004348 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject    69004248  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  69004307
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||| ||
Subject    69004308  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGATC  69004348

Range 16: 112668385 to 112668485 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   112668385  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  112668444
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||| ||
Subject   112668445  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGATC  112668485

Range 17: 112991688 to 112991588 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   112991688  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  112991629
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||| ||
Subject   112991628  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGATC  112991588

Range 18: 348894087 to 348893987 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   348894087  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  348894028
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||| ||||||||||
Subject   348894027  AACCATGGATAATCTTCATCGTTTATCAGGGTGCTTGGGTC  348893987

Range 19: 376601533 to 376601433 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   376601533  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  376601474
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||| ||
Subject   376601473  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGATC  376601433

Range 20: 471581639 to 471581539 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   471581639  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  471581580
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     ||||||||||||||||||||||||||||||||| |||||||
Subject   471581579  AACCATGGATAATCTTCATCGTTTATCAGGATGTTTGGGTC  471581539

Range 21: 480522543 to 480522643 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   480522543  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  480522602
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||| ||||||||||||||||
Subject   480522603  AACCATGGATAATCTTCATCGTTTTTCAGGATGCTTGGGTC  480522643

Range 22: 504357099 to 504357199 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject   504357099  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  504357158
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||| ||||||||||
Subject   504357159  AACCATGGATAATCTTCATCGTTTATCAGGGTGCTTGGGTC  504357199

Range 23: 58138046 to 58138145 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 97/101(96%) 1/101(1%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||
Subject    58138046  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTT-GCTTGTGTGCTTTGCTTATTGCGCCGT  58138105
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    58138106  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  58138146

Range 24: 79362835 to 79362934 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 97/101(96%) 1/101(1%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||
Subject    79362835  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTT-CGCTTGTGTGCTTTGCTTATTGCGCCGT  79362894
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    79362895  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  79362935

Range 25: 2946059 to 2946159 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||  ||
Subject     2946059  TAGTTGTGGAGAGAAAGTCTTCACTTTGTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  2946118
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     2946119  AACCATGGATAATCTTCATCGTTTATCAAGATGCTTGGGTC  2946159

Range 26: 7721743 to 7721643 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||  ||
Subject     7721743  TAGTTATGGAGAGAAAGTCTTCACCTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  7721684
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     7721683  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  7721643

Range 27: 21662367 to 21662267 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  ||
Subject    21662367  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCATTTGCTTATTGCGCCGT  21662308
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    21662307  AACAATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  21662267

Range 28: 24296100 to 24296000 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| || |||||||||||||||||||||||  ||
Subject    24296100  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTTGCTTGTGTCCTTTGCTTATTGCGCCGT  24296041
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    24296040  AACCATGGATAATCTTCATCGTTTATCAGGATACTTGGGTC  24296000

Range 29: 27086107 to 27086207 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||
Subject    27086107  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCCTTTGCTTATTGCGCCGT  27086166
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     ||||||||||||||||||||||||| |||| ||||||||||
Subject    27086167  AACCATGGATAATCTTCATCGTTTAACAGGGTGCTTGGGTC  27086207

Range 30: 28637481 to 28637381 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TAGTTGTGGAGAGAAAGTCTTCACTTTTTTTTCGCTTGTGTCCTTTGCTTATTGCGTAGT  60
                     ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |  ||
Subject    28637481  TAGTTGTGGAGAGAAAGTCTTCACTTTTTCTTCGCTTGTGTCATTTGCTTATTGTGCCGT  28637422
Query            61  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    28637421  AACCATGGATAATCTTCATCGTTTATCAGGATGCTTGGGTC  28637381

Nucleotide Sequence (101 letters)

Query number:14
Query ID:Query_14
Definition line:zxx-014
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5486.6 100% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 9024174 to 9024274 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject     9024174  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  9024233
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     9024234  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  9024274

Range 2: 17842067 to 17842167 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    17842067  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  17842126
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    17842127  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  17842167

Range 3: 30383557 to 30383457 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    30383557  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  30383498
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    30383497  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  30383457

Range 4: 41413620 to 41413520 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    41413620  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  41413561
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    41413560  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  41413520

Range 5: 45989811 to 45989711 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    45989811  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  45989752
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    45989751  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  45989711

Range 6: 47075324 to 47075424 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    47075324  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  47075383
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    47075384  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  47075424

Range 7: 56650294 to 56650194 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    56650294  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  56650235
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    56650234  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  56650194

Range 8: 61372196 to 61372096 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    61372196  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  61372137
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    61372136  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  61372096

Range 9: 63803616 to 63803516 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    63803616  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  63803557
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    63803556  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  63803516

Range 10: 66923706 to 66923606 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    66923706  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  66923647
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    66923646  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  66923606

Range 11: 78832732 to 78832832 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    78832732  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  78832791
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    78832792  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  78832832

Range 12: 107487674 to 107487574 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   107487674  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  107487615
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   107487614  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  107487574

Range 13: 112669205 to 112669305 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   112669205  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  112669264
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   112669265  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  112669305

Range 14: 112990868 to 112990768 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   112990868  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  112990809
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   112990808  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  112990768

Range 15: 114611683 to 114611783 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   114611683  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  114611742
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   114611743  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  114611783

Range 16: 147667163 to 147667263 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   147667163  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  147667222
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   147667223  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  147667263

Range 17: 148786172 to 148786272 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   148786172  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  148786231
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   148786232  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  148786272

Range 18: 328527822 to 328527722 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   328527822  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  328527763
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   328527762  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  328527722

Range 19: 333934439 to 333934339 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   333934439  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  333934380
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   333934379  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  333934339

Range 20: 342618164 to 342618064 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   342618164  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  342618105
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   342618104  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  342618064

Range 21: 384043088 to 384042988 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   384043088  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  384043029
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   384043028  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  384042988

Range 22: 475809897 to 475809997 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   475809897  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  475809956
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   475809957  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  475809997

Range 23: 487684008 to 487684108 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   487684008  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  487684067
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   487684068  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  487684108

Range 24: 498192549 to 498192649 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   498192549  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  498192608
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   498192609  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  498192649

Range 25: 501499122 to 501499222 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   501499122  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  501499181
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   501499182  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  501499222

Range 26: 60575373 to 60575274 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  GTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGCC  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    60575373  GTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGCC  60575314
Query            62  TTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    60575313  TTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  60575274

Range 27: 454618379 to 454618478 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  GTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGCC  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   454618379  GTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGCC  454618438
Query            62  TTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   454618439  TTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  454618478

Range 28: 101379502 to 101379404 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
179.8 bits(198) 0.0 99/99(100%) 0/99(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   101379502  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  101379443
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGA  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   101379442  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGA  101379404

Range 29: 8762024 to 8761924 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Subject     8762024  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCTAAGCGTGC  8761965
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     8761964  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  8761924

Range 30: 12988457 to 12988357 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AGTGTGCTTGAGACCAAGAATATCCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  60
                     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Subject    12988457  AGTGTGCTTGAGACCAAGAATATTCGTCCCTGCATATTATTGAGTCCCCTCCAAGCGTGC  12988398
Query            61  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    12988397  CTTTTCCAGTCAGTCTCCCCTCATACCGCGATTTAGGGAGA  12988357

Nucleotide Sequence (101 letters)

Query number:15
Query ID:Query_15
Definition line:zxx-015
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4867.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18520978 to 18521078 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18520978  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGAGGAGT  18521037
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18521038  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  18521078

Range 2: 7319430 to 7319330 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Subject     7319430  GTTTTGATGTACCGAAGGTAGTTCGGAGTTCCGGATGAGATCGGGGACATGACGAGGAGT  7319371
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject     7319370  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  7319330

Range 3: 106638380 to 106638280 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||
Subject   106638380  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGACGAGT  106638321
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||| ||
Subject   106638320  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACAAC  106638280

Range 4: 116949194 to 116949294 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     |||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||
Subject   116949194  GTTTTGATGTACCGAAGGTAGTTCGGAGATCCGGATGAGATCGGGGACATGACGAGGAGT  116949253
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   116949254  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  116949294

Range 5: 321914386 to 321914286 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||
Subject   321914386  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGATGAGGAGT  321914327
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject   321914326  CTCTAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  321914286

Range 6: 64290812 to 64290714 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/-1 
Query             3  TTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGTCT  62
                     ||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||||
Subject    64290812  TTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGTCT  64290753
Query            63  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||
Subject    64290752  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  64290714

Range 7: 75837199 to 75837101 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/-1 
Query             3  TTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGTCT  62
                     ||||||||||||||||||||| ||| | ||||||||||||||||||||||||| ||||||
Subject    75837199  TTTGATGTACCGAAGGTAGTTTGGAGTCCCGGATGAGATCGGGGACATGATGAGGAGTCT  75837140
Query            63  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||
Subject    75837139  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  75837101

Range 8: 108763678 to 108763776 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/+1 
Query             3  TTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGTCT  62
                     ||||||||||| ||||||||||||| |||||||||||||||||||||||| || ||||||
Subject   108763678  TTTGATGTACCAAAGGTAGTTCGGAGTTCCGGATGAGATCGGGGACATGACGAGGAGTCT  108763737
Query            63  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||
Subject   108763738  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  108763776

Range 9: 161908706 to 161908608 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/-1 
Query             3  TTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGTCT  62
                     ||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||||
Subject   161908706  TTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGTCT  161908647
Query            63  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||
Subject   161908646  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  161908608

Range 10: 421804382 to 421804284 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/-1 
Query             3  TTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGTCT  62
                     ||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||
Subject   421804382  TTTGATGTACCGAAGGTAGTTCGGAGTTCCGGATGAGATCGGGGACATGACGAGGAGTCT  421804323
Query            63  CAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     | |||||||||||||||||||||||||||||||||||||
Subject   421804322  CGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  421804284

Range 11: 24331202 to 24331302 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject    24331202  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  24331261
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    24331262  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  24331302

Range 12: 24547725 to 24547825 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject    24547725  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  24547784
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    24547785  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  24547825

Range 13: 26689566 to 26689466 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject    26689566  GTTTTGATGTACCGAAGGTAGTTCGGATTCCCGGATGAGATCGGGGACATGACGAGGAGT  26689507
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    26689506  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  26689466

Range 14: 32797531 to 32797431 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject    32797531  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  32797472
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    32797471  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  32797431

Range 15: 36822483 to 36822583 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||
Subject    36822483  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGATGAGGAGT  36822542
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| ||||||||||||||||||||| |||||||||||||||
Subject    36822543  CTCGAAATGGTCGAGACGTAAAGATTGATATATTGGACGAC  36822583

Range 16: 36842886 to 36842986 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject    36842886  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  36842945
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    36842946  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  36842986

Range 17: 66605702 to 66605602 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||| |||||| ||||
Subject    66605702  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACTTGATGAGGAGT  66605643
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    66605642  CTCTAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  66605602

Range 18: 79973705 to 79973805 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||| ||||||||| | |||||||||||||||||||||| || ||||
Subject    79973705  GTTTTGATGTACCGAAGATAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  79973764
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    79973765  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  79973805

Range 19: 83399818 to 83399718 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject    83399818  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  83399759
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    83399758  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  83399718

Range 20: 86124150 to 86124050 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject    86124150  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  86124091
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject    86124090  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  86124050

Range 21: 91167408 to 91167508 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||| ||||||||| || ||||
Subject    91167408  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCAGGGACATGACGAGGAGT  91167467
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    91167468  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  91167508

Range 22: 101273277 to 101273377 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject   101273277  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  101273336
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject   101273337  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101273377

Range 23: 106621290 to 106621190 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject   106621290  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  106621231
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject   106621230  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  106621190

Range 24: 114070095 to 114069995 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject   114070095  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  114070036
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject   114070035  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  114069995

Range 25: 120733732 to 120733632 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject   120733732  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  120733673
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||| ||||
Subject   120733672  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGGCGAC  120733632

Range 26: 139459531 to 139459431 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject   139459531  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  139459472
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject   139459471  CTCAAAATGGCCGAGACGTAAAGATCGATATATTGGACGAC  139459431

Range 27: 157970764 to 157970864 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||
Subject   157970764  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGATGAGGAGT  157970823
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| ||||| |||||||||||||||||||||||||||||||
Subject   157970824  CTCGAAATGATCGAGACGTAAAGATCGATATATTGGACGAC  157970864

Range 28: 169455554 to 169455454 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject   169455554  GTTTTGATGTACCGAAGGTAGTTCGGATTCCCGGATGAGATCGGGGACATGACGAGGAGT  169455495
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject   169455494  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  169455454

Range 29: 228042679 to 228042579 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     ||||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||
Subject   228042679  GTTTTGATGTACCGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  228042620
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     ||| |||||||||||||||||||||||||||||||||||||
Subject   228042619  CTCGAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  228042579

Range 30: 285173467 to 285173567 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GTTTTGATGTACCGAAGGTAGTTCGGACTTCCGGATGAGATCGGGGACATGATGACGAGT  60
                     |||||||||||| |||||||||||||| | |||||||||||||||||||||| || ||||
Subject   285173467  GTTTTGATGTACAGAAGGTAGTTCGGAGTCCCGGATGAGATCGGGGACATGACGAGGAGT  285173526
Query            61  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   285173527  CTCAAAATGGTCGAGACGTAAAGATCGATATATTGGACGAC  285173567

Nucleotide Sequence (101 letters)

Query number:16
Query ID:Query_16
Definition line:zxx-016
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5302.6 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 15108418 to 15108318 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject    15108418  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  15108359
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    15108358  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  15108318

Range 2: 16123377 to 16123477 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject    16123377  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  16123436
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    16123437  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  16123477

Range 3: 18521308 to 18521408 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18521308  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGTGCCA  18521367
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18521368  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  18521408

Range 4: 62094235 to 62094335 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject    62094235  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  62094294
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    62094295  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  62094335

Range 5: 62101048 to 62101148 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject    62101048  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  62101107
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    62101108  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  62101148

Range 6: 86096759 to 86096659 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject    86096759  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  86096700
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    86096699  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  86096659

Range 7: 113759685 to 113759585 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   113759685  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  113759626
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   113759625  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  113759585

Range 8: 241811807 to 241811907 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   241811807  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  241811866
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   241811867  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  241811907

Range 9: 241817413 to 241817513 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   241817413  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  241817472
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   241817473  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  241817513

Range 10: 278642820 to 278642920 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   278642820  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  278642879
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   278642880  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  278642920

Range 11: 331182023 to 331182123 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   331182023  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  331182082
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   331182083  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  331182123

Range 12: 335829170 to 335829070 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   335829170  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  335829111
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   335829110  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  335829070

Range 13: 424217295 to 424217395 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   424217295  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  424217354
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   424217355  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  424217395

Range 14: 426498913 to 426499013 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   426498913  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  426498972
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   426498973  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  426499013

Range 15: 461957079 to 461956979 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   461957079  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  461957020
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   461957019  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  461956979

Range 16: 497983173 to 497983074 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   497983173  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  497983114
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATAT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject   497983113  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATAT  497983074

Range 17: 11349698 to 11349598 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Subject    11349698  CTACTTGGAAGGGGGGAATCCTACTCCTGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  11349639
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    11349638  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  11349598

Range 18: 36822813 to 36822913 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Subject    36822813  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGATTCCTCCTAGGGCGCGCCA  36822872
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    36822873  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  36822913

Range 19: 106638053 to 106637953 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   106638053  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  106637994
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   106637993  TAGAGAGGGCCGGCCATCCCCCTCCTCCACTCCTTTATATA  106637953

Range 20: 116323985 to 116324085 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Subject   116323985  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCACGCCA  116324044
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   116324045  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  116324085

Range 21: 116330723 to 116330823 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Subject   116330723  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCACGCCA  116330782
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   116330783  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  116330823

Range 22: 118255831 to 118255931 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Subject   118255831  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCAAGGGCGCGCCA  118255890
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   118255891  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  118255931

Range 23: 122902422 to 122902322 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   122902422  CTACTTGGATGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  122902363
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   122902362  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  122902322

Range 24: 126141318 to 126141218 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   126141318  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  126141259
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject   126141258  TAGAGAGGGCCGGCCCTCCCCCTCCTCCAGTCCTTTATATA  126141218

Range 25: 262385988 to 262386088 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Subject   262385988  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCACCA  262386047
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   262386048  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  262386088

Range 26: 296588782 to 296588882 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   296588782  CTACTTTGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  296588841
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   296588842  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  296588882

Range 27: 317229373 to 317229473 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Subject   317229373  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGTGCGCCA  317229432
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   317229433  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  317229473

Range 28: 317236202 to 317236302 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Subject   317236202  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCACGCCA  317236261
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   317236262  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  317236302

Range 29: 324039732 to 324039632 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Subject   324039732  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGGGCGCCA  324039673
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   324039672  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  324039632

Range 30: 341117841 to 341117741 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTACTTGGAAGGGGGGAATCCTACTCCCGATGGGAGTAGGACTCCTCCTAGGGCGCGCCA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Subject   341117841  CTACTTGGAAGGGGGGAATCCTACTCCCGGTGGGAGTAGGACTCCTCCTAGGGCGCGCCA  341117782
Query            61  TAGAGAGGGCCGGCCCTCCCCCTCCTCCACTCCTTTATATA  101
                     ||||||||||||||||||||||| |||||||||||||||||
Subject   341117781  TAGAGAGGGCCGGCCCTCCCCCTTCTCCACTCCTTTATATA  341117741

Nucleotide Sequence (101 letters)

Query number:17
Query ID:Query_17
Definition line:zxx-017
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4809.4 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18537009 to 18537109 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18537009  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGTGAAA  18537068
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18537069  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  18537109

Range 2: 199162322 to 199162422 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   199162322  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  199162381
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||| |||||||||||||| |||||||||
Subject   199162382  CACTGAAATAGGCAAAAAAACAGCAATTTGGGTTGGGCCTC  199162422

Range 3: 483572556 to 483572656 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   483572556  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  483572615
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||| |||||||||||||| |||||||||
Subject   483572616  CACTGAAATAGGCAAAAAAACAGCAATTTGGGTTGGGCCTC  483572656

Range 4: 139778791 to 139778692 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 96/100(96%) 0/100(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject   139778791  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCTGCGAAA  139778732
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   139778731  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  139778692

Range 5: 483188277 to 483188376 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 97/101(96%) 1/101(1%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject   483188277  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCTGCGAAA  483188336
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||| ||||||||||||||  ||||||||
Subject   483188337  CACTGAAATAGGCAAA-AAACAGCAATTTGGGCTGGGCCTC  483188377

Range 6: 161062440 to 161062540 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   161062440  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  161062499
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||| ||||||||||||||  ||||||||
Subject   161062500  CACTGAAATAGGCAAAAAAACAGCAATTTGGGCTGGGCCTC  161062540

Range 7: 235612336 to 235612236 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   235612336  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  235612277
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||| ||||||||||||||  ||||||||
Subject   235612276  CACTGAAATAGGCAAAAAAACAGCAATTTGGGCTGGGCCTC  235612236

Range 8: 452979163 to 452979063 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Subject   452979163  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCTTCGAAA  452979104
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||  |||||||||||||| |||||||||
Subject   452979103  CACTGAAATAGGCAAGAAAACAGCAATTTGGGTTGGGCCTC  452979063

Range 9: 492924780 to 492924680 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||
Subject   492924780  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGATTCCGTTTGATATTCCTTTTCTGCGAAA  492924721
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||| ||||||||||||||| ||||||||
Subject   492924720  CACTGAAATAGGCAAAAAAACAGCAATTTGGACTGGGCCTC  492924680

Range 10: 374792772 to 374792674 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.0 bits(176) 0.0 96/100(96%) 1/100(1%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Subject   374792772  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCTGCGAAA  374792713
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   374792712  CACTGAAATAGGCAAA-AAACAGCAATTTGCACTGGGCCT  374792673

Range 11: 17727060 to 17726961 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject    17727060  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  17727001
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject    17727000  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  17726961

Range 12: 17739622 to 17739523 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Subject    17739622  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCGGCGAAA  17739563
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject    17739562  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  17739523

Range 13: 90103630 to 90103729 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject    90103630  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  90103689
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject    90103690  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  90103729

Range 14: 92983728 to 92983629 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject    92983728  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  92983669
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject    92983668  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  92983629

Range 15: 163132993 to 163133092 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   163132993  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTATGCGAAA  163133052
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   163133053  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  163133092

Range 16: 226887961 to 226887862 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Subject   226887961  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCTGCCAAA  226887902
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   226887901  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  226887862

Range 17: 250572100 to 250572001 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Subject   250572100  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCTGCGGAA  250572041
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   250572040  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  250572001

Range 18: 297518651 to 297518750 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   297518651  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  297518710
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   297518711  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  297518750

Range 19: 324341856 to 324341955 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   324341856  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  324341915
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   324341916  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  324341955

Range 20: 350233794 to 350233695 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   350233794  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  350233735
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   350233734  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  350233695

Range 21: 382372088 to 382371989 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   382372088  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  382372029
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   382372028  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  382371989

Range 22: 404153754 to 404153853 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   404153754  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  404153813
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   404153814  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  404153853

Range 23: 447690958 to 447691057 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Subject   447690958  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGATTCCATTTGATATTCCTTTTCTGCGAAA  447691017
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   447691018  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  447691057

Range 24: 447795287 to 447795386 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Subject   447795287  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCTGTGAAA  447795346
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   447795347  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  447795386

Range 25: 473387311 to 473387410 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   473387311  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  473387370
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCT  100
                     |||||||||||||||| ||||||||||||| | |||||||
Subject   473387371  CACTGAAATAGGCAAAAAAACAGCAATTTGCACTGGGCCT  473387410

Range 26: 5987149 to 5987248 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 96/101(95%) 1/101(1%) +1/+1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject     5987149  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  5987208
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||| ||||||||||||||  ||||||||
Subject     5987209  CACTGAAATAGGCAAA-AAACAGCAATTTGGGCTGGGCCTC  5987249

Range 27: 262853561 to 262853462 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 96/101(95%) 1/101(1%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject   262853561  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  262853502
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||| ||||||||||||||  ||||||||
Subject   262853501  CACTGAAATAGGCAAA-AAACAGCAATTTGGGCTGGGCCTC  262853461

Range 28: 492894613 to 492894515 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||
Subject   492894613  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGATTCCGTTTGATATTCCTTTTCTGCGAAA  492894554
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCC  99
                     |||||||||||||||| ||||||||||||||| ||||||
Subject   492894553  CACTGAAATAGGCAAAAAAACAGCAATTTGGACTGGGCC  492894515

Range 29: 5614609 to 5614509 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Subject     5614609  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCGTTTGATATTCCTTTTCTGCGAAA  5614550
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||  ||||| |||||||| |||||||||
Subject     5614549  CACTGAAATAGGCAAGAAAACAACAATTTGGGTTGGGCCTC  5614509

Range 30: 84810717 to 84810617 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTTTGCGAAA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Subject    84810717  ATAACTCTCCCGAAGGTTTCATTCCGTTTGGACTCCATTTGATATTCCTTTTCTTCGAAA  84810658
Query            61  CACTGAAATAGGCAAAGAAACAGCAATTTGGATTGGGCCTC  101
                     |||||||||||||||  ||||| |||||||| |||||||||
Subject    84810657  CACTGAAATAGGCAAGAAAACAACAATTTGGGTTGGGCCTC  84810617

Nucleotide Sequence (101 letters)

Query number:18
Query ID:Query_18
Definition line:zxx-018
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 178.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 1

Range 1: 18560953 to 18561053 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GCTGACCTGAGTCTTCACTGGGTACATTATGAAGCTACTTGGTGCCAACCAAATGACATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18560953  GCTGACCTGAGTCTTCACTGGGTACATTATGAAGCTACTTGGTGCCAACCAAATGGCATC  18561012
Query            61  TGTCTCAGTCCTATTACCTGTCGCTTTGGACAGGGACAGAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18561013  TGTCTCAGTCCTATTACCTGTCGCTTTGGACAGGGACAGAT  18561053

Nucleotide Sequence (101 letters)

Query number:19
Query ID:Query_19
Definition line:zxx-019
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5049.2 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18569404 to 18569504 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18569404  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGATCCCG  18569463
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18569464  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  18569504

Range 2: 388459380 to 388459480 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject   388459380  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCACTTCACACGTAGATCCCG  388459439
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   388459440  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  388459480

Range 3: 401274388 to 401274488 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   401274388  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGATCCCG  401274447
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   401274448  CCACGACGCTTTGTTTAGAACTGCACCAACTGACAGCTCCA  401274488

Range 4: 326293887 to 326293985 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
170.8 bits(188) 0.0 97/99(98%) 0/99(0%) +1/+1 
Query             3  ACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCGCC  62
                     ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Subject   326293887  ACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCACTTCACACGTAGATCCCGCC  326293946
Query            63  ACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||
Subject   326293947  ACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  326293985

Range 5: 19709496 to 19709596 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Subject    19709496  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCGCTTCACACGTAGATCCCG  19709555
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    19709556  CCACGACGCTTTGTTTAGAACTGCACCAACTGACAGCTCCA  19709596

Range 6: 45616017 to 45616117 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    45616017  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  45616076
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    45616077  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  45616117

Range 7: 53797350 to 53797450 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    53797350  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  53797409
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    53797410  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  53797450

Range 8: 73567398 to 73567298 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject    73567398  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACATGTAGATCCCG  73567339
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject    73567338  CCACGACGCTTTGCTTAGAACTGCATCAACTGACAGCTCCA  73567298

Range 9: 163631571 to 163631471 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject   163631571  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  163631512
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   163631511  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  163631471

Range 10: 164081932 to 164081832 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject   164081932  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  164081873
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   164081872  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  164081832

Range 11: 302619908 to 302619808 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject   302619908  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  302619849
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   302619848  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  302619808

Range 12: 389079372 to 389079472 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Subject   389079372  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGAACCCG  389079431
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||| ||||||||||||||||||||||||||||||||||
Subject   389079432  CCACGATGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  389079472

Range 13: 453748855 to 453748755 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject   453748855  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  453748796
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   453748795  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  453748755

Range 14: 478714156 to 478714056 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject   478714156  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  478714097
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   478714096  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  478714056

Range 15: 486299347 to 486299447 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject   486299347  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  486299406
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   486299407  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  486299447

Range 16: 7064258 to 7064160 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             3  ACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCGCC  62
                     ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Subject     7064258  ACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCACTTCACACGTAGATCCCGCC  7064199
Query            63  ACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||| ||||||||||||||||||||||||
Subject     7064198  ACGACGCTTTGCTTGGAACTGCACCAACTGACAGCTCCA  7064160

Range 17: 1135821 to 1135721 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject     1135821  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  1135762
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     || ||||||||||||||||||||||||||||||||||||||
Subject     1135761  CCGCGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  1135721

Range 18: 11552387 to 11552487 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    11552387  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  11552446
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    11552447  CCACGACGCTTTGTTTAGAACTGCACCAACTGACAGCTCCA  11552487

Range 19: 22748930 to 22748830 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    22748930  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  22748871
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||| |||||||||||||||||||||||||||||||||
Subject    22748870  CCACGACACTTTGCTTAGAACTGCACCAACTGACAGCTCCA  22748830

Range 20: 22878106 to 22878206 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    22878106  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  22878165
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||| |||||||||||||||||||||||||||||||||
Subject    22878166  CCACGACACTTTGCTTAGAACTGCACCAACTGACAGCTCCA  22878206

Range 21: 25219122 to 25219022 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject    25219122  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCACTTCACACGTAGATCCCG  25219063
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||| ||| |||||||||||||||||||||||||||||||||
Subject    25219062  CCATGACACTTTGCTTAGAACTGCACCAACTGACAGCTCCA  25219022

Range 22: 27362733 to 27362833 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    27362733  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  27362792
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    27362793  CCACGACGCTTTGTTTAGAACTGCACCAACTGACAGCTCCA  27362833

Range 23: 28177106 to 28177006 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    28177106  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  28177047
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject    28177046  CCACGACGCTTTGCTTAGAACTGCACCAACTTACAGCTCCA  28177006

Range 24: 31690241 to 31690341 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    31690241  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  31690300
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||| |||||||||||||||||||||||||||||||||
Subject    31690301  CCACGACACTTTGCTTAGAACTGCACCAACTGACAGCTCCA  31690341

Range 25: 38510642 to 38510742 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    38510642  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  38510701
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||| |||||||||||||||||||||||||||||||||
Subject    38510702  CCACGACACTTTGCTTAGAACTGCACCAACTGACAGCTCCA  38510742

Range 26: 45075602 to 45075502 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| 
Subject    45075602  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCTGCTTCACACGTAGATCCCA  45075543
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    45075542  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  45075502

Range 27: 55789060 to 55788960 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Subject    55789060  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACACGTAGATCCCG  55789001
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    55789000  CCACGACGCTTTGTTTAGAACTGCACCAACTGACAGCTCCA  55788960

Range 28: 63369607 to 63369707 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject    63369607  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCACTTCACACGTAGATCCCG  63369666
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     ||||||| ||||| |||||||||||||||||||||||||||
Subject    63369667  CCACGACACTTTGTTTAGAACTGCACCAACTGACAGCTCCA  63369707

Range 29: 70205133 to 70205033 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject    70205133  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCACTTCACACGTAGATCCCG  70205074
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||| |||||| |||||||||||||||||||||||||||
Subject    70205073  CCACGATGCTTTGTTTAGAACTGCACCAACTGACAGCTCCA  70205033

Range 30: 72125730 to 72125630 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGACTCCTTCATTTGCTGCTTCCGAAGTAGCTATGTACTCCACTTCACACGTAGAACCCG  60
                     ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||
Subject    72125730  AGACTCCTTCATTTGCTGCTTCCGAAGCAGCTATGTACTCCGCTTCACATGTAGATCCCG  72125671
Query            61  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    72125670  CCACGACGCTTTGCTTAGAACTGCACCAACTGACAGCTCCA  72125630

Nucleotide Sequence (101 letters)

Query number:20
Query ID:Query_20
Definition line:zxx-020
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4887.8 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18570450 to 18570550 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18570450  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACTGTCA  18570509
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18570510  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  18570550

Range 2: 383398864 to 383398964 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Subject   383398864  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  383398923
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   383398924  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  383398964

Range 3: 25994544 to 25994644 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||
Subject    25994544  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTATAAACAGTAACATTACCGTCA  25994603
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    25994604  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  25994644

Range 4: 45074558 to 45074458 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject    45074558  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  45074499
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    45074498  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  45074458

Range 5: 73566352 to 73566252 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject    73566352  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  73566293
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    73566292  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  73566252

Range 6: 90062148 to 90062248 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject    90062148  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  90062207
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    90062208  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  90062248

Range 7: 104479161 to 104479061 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject   104479161  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  104479102
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   104479101  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  104479061

Range 8: 411234462 to 411234562 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject   411234462  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  411234521
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   411234522  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  411234562

Range 9: 424772299 to 424772399 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject   424772299  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  424772358
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   424772359  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  424772399

Range 10: 491195431 to 491195530 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 96/100(96%) 0/100(0%) +1/+1 
Query             2  GAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCAG  61
                     |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||
Subject   491195431  GAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTATAAACAGTAACATTACCGTCAG  491195490
Query            62  CGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     |||||||||||| |||||||||||||||||||||||||||
Subject   491195491  CGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  491195530

Range 11: 64027900 to 64027800 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     |||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||
Subject    64027900  TGAACTTGTCGAAAACCTTTCGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  64027841
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    64027840  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  64027800

Range 12: 83070721 to 83070821 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||| |||| || ||||||||||||||||| ||||||||||||||||||
Subject    83070721  TGAACTTGTCGAAAAACTTTCGTAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  83070780
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject    83070781  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  83070821

Range 13: 99389631 to 99389531 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject    99389631  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  99389572
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| ||||||||||||||||||||| |||||
Subject    99389571  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCAATGGC  99389531

Range 14: 124341554 to 124341654 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     |||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||
Subject   124341554  TGAACTTGTCGAAAACCTTTCGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  124341613
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   124341614  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  124341654

Range 15: 126188802 to 126188902 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     |||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||
Subject   126188802  TGAACTTGTCGAAAACCTTTCGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  126188861
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   126188862  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  126188902

Range 16: 126888719 to 126888819 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject   126888719  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTATACAGTAACATTACCGTCA  126888778
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| ||||||||||||||||||||| |||||
Subject   126888779  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCTATGGC  126888819

Range 17: 139873539 to 139873439 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| |||
Subject   139873539  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCATCA  139873480
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   139873479  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  139873439

Range 18: 143121041 to 143121141 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     |||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||
Subject   143121041  TGAACTTGTCGAAAACCTTTCGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  143121100
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   143121101  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  143121141

Range 19: 152021897 to 152021997 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     |||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||
Subject   152021897  TGAACTTGTCGAAAACCTTTCGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  152021956
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   152021957  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  152021997

Range 20: 165131307 to 165131407 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject   165131307  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  165131366
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| ||||||||||||||||||||| |||||
Subject   165131367  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCTATGGC  165131407

Range 21: 172894691 to 172894791 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject   172894691  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  172894750
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||| ||||||| |||||||||||||||||||||||||||
Subject   172894751  GCGTCGGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  172894791

Range 22: 177351795 to 177351895 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||||||
Subject   177351795  TGAACTTGTCGAAAACCTTTTGCAACAAGTTGAGCTTTGTAGACAGTAACATTACCGTCA  177351854
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   177351855  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  177351895

Range 23: 178769990 to 178769890 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| |||||||||||| |||||
Subject   178769990  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTATCGTCA  178769931
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   178769930  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  178769890

Range 24: 294596669 to 294596769 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||||
Subject   294596669  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTATAGACAGTAACATTACCGTCA  294596728
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   294596729  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  294596769

Range 25: 301576933 to 301576833 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||||
Subject   301576933  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTATAGACAGTAACATTACCGTCA  301576874
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   301576873  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  301576833

Range 26: 302733620 to 302733520 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     |||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||
Subject   302733620  TGAACTTGTCGAAAACCTTTCGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  302733561
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   302733560  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  302733520

Range 27: 319680297 to 319680197 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||
Subject   319680297  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  319680238
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| ||||||||||||||||||||| |||||
Subject   319680237  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCAATGGC  319680197

Range 28: 348029537 to 348029637 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     |||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||
Subject   348029537  TGAACTTGTCGAAAACCTTTCGCCACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  348029596
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| ||||||||||||||||||||| |||||
Subject   348029597  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCTATGGC  348029637

Range 29: 351788020 to 351787920 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     |||||||||||||||||||| |  ||||||||||||||||| ||||||||||||||||||
Subject   351788020  TGAACTTGTCGAAAACCTTTCGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTCA  351787961
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   351787960  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  351787920

Range 30: 356259471 to 356259371 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TGAACTTGTCGAAAACCTTTTGTCACAAGTCGAGCTTTGTAAACAGTAACATTACCGTCA  60
                     ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||| |
Subject   356259471  TGAACTTGTCGAAAACCTTTTGCAACAAGTCGAGCTTTGTAGACAGTAACATTACCGTTA  356259412
Query            61  GCGTCAGTCTTCTCCTTGAAGATCCATTTATTCTCGATGGC  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   356259411  GCGTCAGTCTTCTTCTTGAAGATCCATTTATTCTCGATGGC  356259371

Nucleotide Sequence (101 letters)

Query number:21
Query ID:Query_21
Definition line:zxx-021
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4909.5 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18574420 to 18574520 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18574420  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  18574479
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18574480  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  18574520

Range 2: 180087428 to 180087328 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   180087428  GGAAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  180087369
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   180087368  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  180087328

Range 3: 22308352 to 22308252 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||
Subject    22308352  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAATGCGGT  22308293
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    22308292  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  22308252

Range 4: 55061338 to 55061238 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject    55061338  GGAAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  55061279
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    55061278  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  55061238

Range 5: 55069630 to 55069530 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject    55069630  GGAAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  55069571
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    55069570  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  55069530

Range 6: 76785759 to 76785659 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject    76785759  GGAAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  76785700
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    76785699  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  76785659

Range 7: 96114854 to 96114954 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||
Subject    96114854  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTAGCACAACGCGGT  96114913
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    96114914  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  96114954

Range 8: 117869859 to 117869959 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   117869859  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  117869918
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject   117869919  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  117869959

Range 9: 117876706 to 117876806 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   117876706  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  117876765
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject   117876766  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  117876806

Range 10: 180094225 to 180094125 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   180094225  GGAAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  180094166
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject   180094165  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  180094125

Range 11: 421695662 to 421695762 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   421695662  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  421695721
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject   421695722  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  421695762

Range 12: 454326994 to 454326894 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   454326994  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  454326935
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject   454326934  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  454326894

Range 13: 457827782 to 457827682 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   457827782  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  457827723
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||| ||||||||||||||||||||||||||
Subject   457827722  TGATGTAGTCGTACTTCTTCACGATCTGACCGATCCAAGTA  457827682

Range 14: 457853208 to 457853108 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   457853208  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  457853149
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject   457853148  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  457853108

Range 15: 237106411 to 237106510 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 97/101(96%) 1/101(1%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Subject   237106411  GGGAGAGTGT-GTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACACGGT  237106470
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject   237106471  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  237106511

Range 16: 260000231 to 260000330 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 97/101(96%) 1/101(1%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   260000231  GGGAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATCACAACGCGGT  260000290
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||||||||||| ||||||
Subject   260000291  TGATGTAGTCGTACGTCTTCACGATCTGACCGAT-CAAGTA  260000331

Range 17: 5075144 to 5075244 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||
Subject     5075144  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACACCGCGGT  5075203
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     5075204  TGATGTAGTCGTACGTCTTCACGATCTGTCCGATCCAAGTA  5075244

Range 18: 25810437 to 25810337 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Subject    25810437  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACACGGT  25810378
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     ||||||||||||||||||| |||||| ||||||||| ||||
Subject    25810377  TGATGTAGTCGTACGTCTTTACGATCCGACCGATCCTAGTA  25810337

Range 19: 28704925 to 28705025 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
Subject    28704925  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGTT  28704984
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    28704985  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  28705025

Range 20: 28769630 to 28769730 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
Subject    28769630  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGTT  28769689
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    28769690  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  28769730

Range 21: 35154199 to 35154299 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||
Subject    35154199  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTAGCACAACACGGT  35154258
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    35154259  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  35154299

Range 22: 60462333 to 60462433 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||
Subject    60462333  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATAACAACGCGGT  60462392
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    60462393  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  60462433

Range 23: 67826010 to 67826110 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||
Subject    67826010  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTAGCACAACACGGT  67826069
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    67826070  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  67826110

Range 24: 70313908 to 70313808 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||
Subject    70313908  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGTAAGCGGAAGCGTTATGACAACGCGGT  70313849
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    70313848  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  70313808

Range 25: 70363146 to 70363046 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||
Subject    70363146  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGTAAGCGGAAGCGTTATGACAACGCGGT  70363087
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    70363086  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  70363046

Range 26: 73530394 to 73530294 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject    73530394  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  73530335
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||| ||| ||||||||||||||
Subject    73530334  TGATGTAGTCGTACGTCTTCACAATCCGACCGATCCAAGTA  73530294

Range 27: 75351627 to 75351727 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||
Subject    75351627  GGGAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTAGCACAACGCGGT  75351686
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    75351687  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  75351727

Range 28: 76788132 to 76788232 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||
Subject    76788132  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCATTATGACAACGCGGT  76788191
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    76788192  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCAAGTA  76788232

Range 29: 79721423 to 79721523 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    79721423  GGGAGAGTGTTATCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  79721482
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||| ||||
Subject    79721483  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCTAGTA  79721523

Range 30: 80902178 to 80902078 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GGCAGAGTGTTGTCCACGTACCCTCATAGACCGAAAGCGGAAGCGTTATGACAACACGGT  60
                     || |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject    80902178  GGGAGAGTGTTGTCCACGTACCCTCGTAGACCGAAAGCGGAAGCGTTATGACAACGCGGT  80902119
Query            61  TGATGTAGTCGTACGTCTTCACGATCTGACCGATCCAAGTA  101
                     |||||||||||||||||||||||||| ||||||||| ||||
Subject    80902118  TGATGTAGTCGTACGTCTTCACGATCCGACCGATCCTAGTA  80902078

Nucleotide Sequence (101 letters)

Query number:22
Query ID:Query_22
Definition line:zxx-022
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5502.8 100% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 1479321 to 1479421 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject     1479321  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  1479380
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     1479381  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  1479421

Range 2: 1515934 to 1515834 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject     1515934  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  1515875
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     1515874  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  1515834

Range 3: 6740714 to 6740814 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject     6740714  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  6740773
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     6740774  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  6740814

Range 4: 8501611 to 8501511 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject     8501611  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  8501552
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     8501551  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  8501511

Range 5: 28329809 to 28329709 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    28329809  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  28329750
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    28329749  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  28329709

Range 6: 38179183 to 38179283 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    38179183  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  38179242
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    38179243  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  38179283

Range 7: 38658540 to 38658440 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    38658540  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  38658481
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    38658480  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  38658440

Range 8: 48104593 to 48104493 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    48104593  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  48104534
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    48104533  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  48104493

Range 9: 59936234 to 59936334 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    59936234  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  59936293
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    59936294  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  59936334

Range 10: 61825893 to 61825993 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    61825893  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  61825952
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    61825953  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  61825993

Range 11: 65913699 to 65913799 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    65913699  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  65913758
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    65913759  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  65913799

Range 12: 74316911 to 74317011 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    74316911  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  74316970
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    74316971  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  74317011

Range 13: 79381135 to 79381035 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    79381135  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  79381076
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    79381075  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  79381035

Range 14: 82591978 to 82591878 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    82591978  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  82591919
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    82591918  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  82591878

Range 15: 99260755 to 99260855 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    99260755  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  99260814
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    99260815  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  99260855

Range 16: 118838308 to 118838208 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   118838308  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  118838249
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   118838248  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  118838208

Range 17: 121159804 to 121159704 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   121159804  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  121159745
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   121159744  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  121159704

Range 18: 122456890 to 122456790 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   122456890  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  122456831
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   122456830  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  122456790

Range 19: 140785663 to 140785563 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   140785663  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  140785604
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   140785603  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  140785563

Range 20: 145140349 to 145140249 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   145140349  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  145140290
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   145140289  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  145140249

Range 21: 145552473 to 145552373 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   145552473  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  145552414
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   145552413  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  145552373

Range 22: 148051766 to 148051666 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   148051766  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  148051707
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   148051706  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  148051666

Range 23: 153312997 to 153313097 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   153312997  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  153313056
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   153313057  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  153313097

Range 24: 162072459 to 162072559 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   162072459  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  162072518
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   162072519  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  162072559

Range 25: 180395054 to 180394954 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   180395054  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  180394995
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   180394994  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  180394954

Range 26: 201021146 to 201021046 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   201021146  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  201021087
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   201021086  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  201021046

Range 27: 213824070 to 213823970 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   213824070  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  213824011
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   213824010  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  213823970

Range 28: 215366759 to 215366859 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   215366759  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  215366818
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   215366819  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  215366859

Range 29: 223672295 to 223672395 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   223672295  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  223672354
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   223672355  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  223672395

Range 30: 227525632 to 227525532 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   227525632  TGTCAACTTAGTCAATATGCACGATTCTAGCTCCAGTGACCGTACGATGTCCATCCAACG  227525573
Query            61  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   227525572  GCCGTAGTGCTTCTTCAACCTCTGGTCTTCTTGCTCCAGCC  227525532

Nucleotide Sequence (101 letters)

Query number:23
Query ID:Query_23
Definition line:zxx-023
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 738.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 6

Range 1: 18621322 to 18621422 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTACCCAACTAACAATATCAGAGACTCGTATTTATTACAACAAAATCAGAGTGGCACAGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18621322  CTACCCAACTAACAATATCAGAGACTCGTATTTATTACAACAAAATCAGAGTGGCGCAGC  18621381
Query            61  GGAAGCGTGGTGGGCCCATAACCCACAGGTCCCAGGATCGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18621382  GGAAGCGTGGTGGGCCCATAACCCACAGGTCCCAGGATCGA  18621422

Range 2: 18731060 to 18731135 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 73/76(96%) 0/76(0%) +1/+1 
Query            26  TCGTATTTATTACAACAAAATCAGAGTGGCACAGCGGAAGCGTGGTGGGCCCATAACCCA  85
                     ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Subject    18731060  TCGTAATTATCACAACAAAATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCA  18731119
Query            86  CAGGTCCCAGGATCGA  101
                     ||||||||||||||||
Subject    18731120  CAGGTCCCAGGATCGA  18731135

Range 3: 18556860 to 18556785 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
111.3 bits(122) 0.0 70/76(92%) 0/76(0%) +1/-1 
Query            26  TCGTATTTATTACAACAAAATCAGAGTGGCACAGCGGAAGCGTGGTGGGCCCATAACCCA  85
                     ||||| | ||   ||||||||||||||||| |||||||||||||||||||||||||||||
Subject    18556860  TCGTAATAATGTAAACAAAATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCA  18556801
Query            86  CAGGTCCCAGGATCGA  101
                     ||||||||||||||||
Subject    18556800  CAGGTCCCAGGATCGA  18556785

Range 4: 377175444 to 377175380 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
109.5 bits(120) 0.0 63/65(97%) 0/65(0%) +1/-1 
Query            37  ACAACAAAATCAGAGTGGCACAGCGGAAGCGTGGTGGGCCCATAACCCACAGGTCCCAGG  96
                     ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject   377175444  ACAACAACATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGTCCCAGG  377175385
Query            97  ATCGA  101
                     |||||
Subject   377175384  ATCGA  377175380

Range 5: 18488270 to 18488197 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
107.7 bits(118) 0.0 68/74(92%) 0/74(0%) +1/-1 
Query            28  GTATTTATTACAACAAAATCAGAGTGGCACAGCGGAAGCGTGGTGGGCCCATAACCCACA  87
                     ||| ||||  |||||| ||||||||||| ||||| |||||||||||||||||||||||||
Subject    18488270  GTAATTATGCCAACAACATCAGAGTGGCGCAGCGAAAGCGTGGTGGGCCCATAACCCACA  18488211
Query            88  GGTCCCAGGATCGA  101
                     ||||||||||||||
Subject    18488210  GGTCCCAGGATCGA  18488197

Range 6: 411709253 to 411709320 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
105.9 bits(116) 0.0 64/68(94%) 0/68(0%) +1/+1 
Query            34  ATTACAACAAAATCAGAGTGGCACAGCGGAAGCGTGGTGGGCCCATAACCCACAGGTCCC  93
                     || ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   411709253  ATAACAGCGAAATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCCATAACCCACAGGTCCC  411709312
Query            94  AGGATCGA  101
                     ||||||||
Subject   411709313  AGGATCGA  411709320

Nucleotide Sequence (101 letters)

Query number:24
Query ID:Query_24
Definition line:zxx-024
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 792.6 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 7

Range 1: 18639645 to 18639745 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAATAGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18639645  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAACAGAG  18639704
Query            61  GTGACATATACTGACAGTAAAAACAGGGAATGGATATATCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18639705  GTGACATATACTGACAGTAAAAACAGGGAATGGATATATCC  18639745

Range 2: 33227834 to 33227894 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
102.3 bits(112) 0.0 59/61(97%) 0/61(0%) +1/+1 
Query             1  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAATAGAG  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Subject    33227834  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTTAAAATTATGCTACGATTCCCAATAGTG  33227893
Query            61  G  61
                     |
Subject    33227894  G  33227894

Range 3: 33240419 to 33240479 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
102.3 bits(112) 0.0 59/61(97%) 0/61(0%) +1/+1 
Query             1  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAATAGAG  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Subject    33240419  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTTAAAATTATGCTACGATTCCCAATAGTG  33240478
Query            61  G  61
                     |
Subject    33240479  G  33240479

Range 4: 33256010 to 33256070 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
102.3 bits(112) 0.0 59/61(97%) 0/61(0%) +1/+1 
Query             1  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAATAGAG  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Subject    33256010  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTTAAAATTATGCTACGATTCCCAATAGTG  33256069
Query            61  G  61
                     |
Subject    33256070  G  33256070

Range 5: 57070371 to 57070311 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
102.3 bits(112) 0.0 59/61(97%) 0/61(0%) +1/-1 
Query             1  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAATAGAG  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Subject    57070371  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTTAAAATTATGCTACGATTCCCAATAGTG  57070312
Query            61  G  61
                     |
Subject    57070311  G  57070311

Range 6: 295682594 to 295682654 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
102.3 bits(112) 0.0 59/61(97%) 0/61(0%) +1/+1 
Query             1  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAATAGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Subject   295682594  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAACAGTG  295682653
Query            61  G  61
                     |
Subject   295682654  G  295682654

Range 7: 458396642 to 458396582 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
102.3 bits(112) 0.0 59/61(97%) 0/61(0%) +1/-1 
Query             1  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTAAAAATTATGCTACGATTCCCAATAGAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Subject   458396642  ATAGATGCATCTTGGTGAGCGTAGGAAAATTTGAAAATTATGCTACGATTCCCAACAGAG  458396583
Query            61  G  61
                     |
Subject   458396582  G  458396582

Nucleotide Sequence (101 letters)

Query number:25
Query ID:Query_25
Definition line:zxx-025
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 3863.8 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 26

Range 1: 18659995 to 18660095 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18659995  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  18660054
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18660055  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  18660095

Range 2: 186448898 to 186448798 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Subject   186448898  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  186448839
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   186448838  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  186448798

Range 3: 275793744 to 275793844 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Subject   275793744  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  275793803
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   275793804  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  275793844

Range 4: 414764122 to 414764222 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Subject   414764122  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  414764181
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   414764182  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  414764222

Range 5: 434076167 to 434076267 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Subject   434076167  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  434076226
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   434076227  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  434076267

Range 6: 27403282 to 27403382 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||
Subject    27403282  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCTAGCTTC  27403341
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    27403342  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  27403382

Range 7: 118982269 to 118982169 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||
Subject   118982269  GTTCATCGATACAAAAGAAACATAGTTAATCCAAACAAGCACTCCATCTATGCAAGCTTC  118982210
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   118982209  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  118982169

Range 8: 223359368 to 223359468 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Subject   223359368  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTACGCAAGCTTC  223359427
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   223359428  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  223359468

Range 9: 370014737 to 370014837 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||
Subject   370014737  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCTAGCTTC  370014796
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   370014797  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  370014837

Range 10: 376374733 to 376374833 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||
Subject   376374733  GTTCATCGATACAAAAGAAAAATAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  376374792
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   376374793  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  376374833

Range 11: 450203962 to 450203862 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||
Subject   450203962  GTTCATCGATACAAAAGAAAAATAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  450203903
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   450203902  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  450203862

Range 12: 39667110 to 39667210 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||
Subject    39667110  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCTAGCTTC  39667169
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||| ||||||||||||||
Subject    39667170  CGTGAAGCGAATGAATTCTGCAAAATAGGAAATAAGAAAGT  39667210

Range 13: 98632112 to 98632212 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||
Subject    98632112  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCTAGCTTC  98632171
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||| ||||||||||||||||||||||
Subject    98632172  CGTGAAGCGAATGAATTCCGCAAAATGGGAAATAAGAAAGT  98632212

Range 14: 110103972 to 110104072 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||
Subject   110103972  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCGCTCCATCTATGCAAGCTTC  110104031
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||| ||||
Subject   110104032  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGGAAGT  110104072

Range 15: 270902107 to 270902007 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Subject   270902107  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  270902048
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||| |||| |||||||||||||||||||||||
Subject   270902047  CGTGAAGCGAATAAATTTTGCAAAATGGGAAATAAGAAAGT  270902007

Range 16: 332234566 to 332234664 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
158.2 bits(174) 0.0 96/101(95%) 2/101(2%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     ||||||||||| |||||| |  ||||||||||||||||||||||||||||||||| ||||
Subject   332234566  GTTCATCGATATAAAAGAAA--TAGTTCATCCAAACAAGCACTCCATCTATGCAAGCTTC  332234625
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   332234626  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  332234666

Range 17: 31736851 to 31736951 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||| ||||||||||| |||||||||||||||||||||||||||||||| | | ||||
Subject    31736851  GTTCATTGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATCCTAGCTTC  31736910
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     ||||||| |||||||||||||||||||||||||||| ||||
Subject    31736911  CGTGAAGTGAATGAATTCTGCAAAATGGGAAATAAGGAAGT  31736951

Range 18: 76102478 to 76102399 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
132.0 bits(145) 0.0 77/80(96%) 0/80(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||
Subject    76102478  GTTCATCGATACAAAAGAAACATAGTTCATCCAAACAAGCACTCCATCTATGCTAGCTTC  76102419
Query            61  CGTGAAGCGAATGAATTCTG  80
                     ||||||||||||||||||||
Subject    76102418  CGTGAAGCGAATGAATTCTG  76102399

Range 19: 218452459 to 218452559 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
115.8 bits(127) 0.0 86/101(85%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| | | ||       |||||||||||||||| |||||| ||||
Subject   218452459  GTTCATCGATACAAAAGAAAAACAGAAAGGGAAAACAAGCACTCCATCAATGCAAGCTTC  218452518
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     ||||||| ||||||| |||||||||||||||| ||||||||
Subject   218452519  CGTGAAGTGAATGAAATCTGCAAAATGGGAAACAAGAAAGT  218452559

Range 20: 197005920 to 197005820 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
111.3 bits(122) 0.0 85/101(84%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| | | ||       |||||||||||||||| |||||| ||||
Subject   197005920  GTTCATCGATACAAAAGAAAAACAGAAAGGGAAAACAAGCACTCCATCAATGCAAGCTTC  197005861
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     ||||||| ||||||| |||||||||||||||| || |||||
Subject   197005860  CGTGAAGTGAATGAAATCTGCAAAATGGGAAACAACAAAGT  197005820

Range 21: 235163948 to 235163848 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
111.3 bits(122) 0.0 85/101(84%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| | | |        |||||||||||||||| |||||| ||||
Subject   235163948  GTTCATCGATACAAAAGAAAAACAAAAAGGGAAAACAAGCACTCCATCAATGCAAGCTTC  235163889
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                      |||||| ||||||| |||||||||||||||||||||||||
Subject   235163888  GGTGAAGTGAATGAAATCTGCAAAATGGGAAATAAGAAAGT  235163848

Range 22: 162587201 to 162587269 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
107.7 bits(118) 0.0 65/69(94%) 0/69(0%) +1/+1 
Query            33  AAACAAGCACTCCATCTATGCAAACTTCCGTGAAGCGAATGAATTCTGCAAAATGGGAAA  92
                     |||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||
Subject   162587201  AAACAAGCACTCCATCAATGCAAGCTTCCGTGAAGTGAATGAAATCTGCAAAATGGGAAA  162587260
Query            93  TAAGAAAGT  101
                     |||||||||
Subject   162587261  TAAGAAAGT  162587269

Range 23: 377502510 to 377502410 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
106.8 bits(117) 0.0 84/101(83%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     ||||||| |||||||||| | | ||       |||||||||||||||| ||||||  || 
Subject   377502510  GTTCATCTATACAAAAGAAAAACAGGAAGGGAAAACAAGCACTCCATCAATGCAAGTTTT  377502451
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     ||||||| ||||||| |||||||||||||||||||||||||
Subject   377502450  CGTGAAGTGAATGAAATCTGCAAAATGGGAAATAAGAAAGT  377502410

Range 24: 428093070 to 428092970 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
106.8 bits(117) 0.0 84/101(83%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| | | ||        ||||||||||||||| |||||| ||| 
Subject   428093070  GTTCATCGATACAAAAGAAATAGAGAAAGGGATAACAAGCACTCCATCAATGCAAGCTTT  428093011
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     ||||||| ||||||| |||||||||||||| ||||||||||
Subject   428093010  CGTGAAGTGAATGAAATCTGCAAAATGGGAGATAAGAAAGT  428092970

Range 25: 56270663 to 56270763 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
102.3 bits(112) 0.0 83/101(82%) 0/101(0%) +1/+1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||| | |   ||   |   ||| |||||||||||| |||||| ||||
Subject    56270663  GTTCATCGATACAAAATAAAAGCAGAAAAGGAAAAGAAGCACTCCATCCATGCAAGCTTC  56270722
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||  |||||| |||||||||||||||| ||||||||
Subject    56270723  CGTGAAGTAAATGAAATCTGCAAAATGGGAAACAAGAAAGT  56270763

Range 26: 216573536 to 216573436 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
102.3 bits(112) 0.0 83/101(82%) 0/101(0%) +1/-1 
Query             1  GTTCATCGATACAAAAGACACATAGTTCATCCAAACAAGCACTCCATCTATGCAAACTTC  60
                     |||||||||||||||||| |   ||       ||| |||||||||||| |||||| ||||
Subject   216573536  GTTCATCGATACAAAAGAAAAGCAGAAAGGAAAAAGAAGCACTCCATCCATGCAAGCTTC  216573477
Query            61  CGTGAAGCGAATGAATTCTGCAAAATGGGAAATAAGAAAGT  101
                     |||||||  |||||| |||| ||||||||||||||||||||
Subject   216573476  CGTGAAGTAAATGAAATCTGGAAAATGGGAAATAAGAAAGT  216573436

Nucleotide Sequence (101 letters)

Query number:26
Query ID:Query_26
Definition line:zxx-026
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5142.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18664989 to 18665089 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18664989  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAGTCAC  18665048
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18665049  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  18665089

Range 2: 143172899 to 143172999 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   143172899  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  143172958
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   143172959  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  143172999

Range 3: 159833342 to 159833442 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   159833342  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  159833401
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   159833402  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  159833442

Range 4: 184527382 to 184527482 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   184527382  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  184527441
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   184527442  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  184527482

Range 5: 235608275 to 235608175 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   235608275  AAGGAATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  235608216
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject   235608215  AAATCTCATCTCCTCGCAATTTACATTATTTTCCATTTGCC  235608175

Range 6: 237896978 to 237896878 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   237896978  AAGGAATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  237896919
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject   237896918  AAATCTCATCTCCTCGCAATTTACATTATATGCCATTTGCC  237896878

Range 7: 249951237 to 249951137 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Subject   249951237  AAGGAATTTCTGGCACCATTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  249951178
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   249951177  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  249951137

Range 8: 278636088 to 278636188 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   278636088  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  278636147
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   278636148  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  278636188

Range 9: 355190433 to 355190533 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject   355190433  AAGGAATTTCTGGCACTGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  355190492
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   355190493  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  355190533

Range 10: 40369890 to 40369990 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Subject    40369890  AAGGAATTTCTGGCACCGTTGTCGGGGAGGATCCTCAACATATACCAGGTTCCTAATCAC  40369949
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    40369950  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  40369990

Range 11: 108661939 to 108661839 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Subject   108661939  AAGGAATTTCTGGCGCCGTTGCCGGGAAGGATCTTCAACATATACCAGGTTCCTAATCAC  108661880
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   108661879  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  108661839

Range 12: 109561831 to 109561931 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   109561831  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  109561890
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||| ||||||||||||||||||||||||||
Subject   109561891  AAATCTCATCTCCTTGCAATTTACATTATTTGCCATTTGCC  109561931

Range 13: 131100856 to 131100756 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   131100856  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  131100797
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject   131100796  AAATCTCATCTCCTCGCAATTTACATTATTTTCCATTTGCC  131100756

Range 14: 152846049 to 152846149 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Subject   152846049  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCGGGTTCCTAATCAC  152846108
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   152846109  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  152846149

Range 15: 175959430 to 175959330 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   175959430  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  175959371
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||| ||||||||||||||||||||||||||
Subject   175959370  AAATCTCATCTCCTTGCAATTTACATTATTTGCCATTTGCC  175959330

Range 16: 192189333 to 192189233 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Subject   192189333  AAGGAATTTCTGGTGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  192189274
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   192189273  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  192189233

Range 17: 193365189 to 193365089 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Subject   193365189  AAGGAATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACTTATACCAGGTTCCTAATCAC  193365130
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     ||||| |||||||||||||||||||||||||||||||||||
Subject   193365129  AAATCCCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  193365089

Range 18: 194123029 to 194123129 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||
Subject   194123029  AAGGAATTTCTGGCGCCGTTGCTGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  194123088
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   194123089  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  194123129

Range 19: 205974866 to 205974766 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   205974866  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  205974807
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||| ||||||||||||||||||||||||||
Subject   205974806  AAATCTCATCTCCTTGCAATTTACATTATTTGCCATTTGCC  205974766

Range 20: 212800389 to 212800489 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Subject   212800389  AAGGAATTTCTGGCGCCGTTGTCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  212800448
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   212800449  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  212800489

Range 21: 227520432 to 227520332 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Subject   227520432  AAGGAATTTCTGGCACCGTTGCCGGGGAGGATCTTCAATATATACCAGGTTCCTAATCAC  227520373
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject   227520372  AAATCTCATCTCCTCGCAATTTACATTATTTTCCATTTGCC  227520332

Range 22: 227750164 to 227750259 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 95/96(99%) 0/96(0%) +1/+1 
Query             6  ATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCACAAATC  65
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   227750164  ATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCACAAATC  227750223
Query            66  TCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||| |||||||||
Subject   227750224  TCATCTCCTCGCAATTTACATTATTTCCCATTTGCC  227750259

Range 23: 241500832 to 241500732 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   241500832  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  241500773
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                      ||||||||||||||||||||||||||||||||||||||||
Subject   241500772  GAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  241500732

Range 24: 257247224 to 257247124 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||
Subject   257247224  AAGGAATTTCTAGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  257247165
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   257247164  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  257247124

Range 25: 344484005 to 344483905 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Subject   344484005  AAGGAATTTCTGGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  344483946
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||| ||||||||||||||||||||||||||
Subject   344483945  AAATCTCATCTCCTTGCAATTTACATTATTTGCCATTTGCC  344483905

Range 26: 381361367 to 381361467 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Subject   381361367  AAGGAATTTCTGGCGCTGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  381361426
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   381361427  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  381361467

Range 27: 382910369 to 382910269 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   382910369  AAGGAATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  382910310
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     || ||||||||||||||||||||||| ||||||||||||||
Subject   382910309  AATTCTCATCTCCTCGCAATTTACATGATTTGCCATTTGCC  382910269

Range 28: 385953760 to 385953665 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 95/96(99%) 0/96(0%) +1/-1 
Query             6  ATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCACAAATC  65
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   385953760  ATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCACAAATC  385953701
Query            66  TCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     ||||||||||||||||||||||||||||||||| ||
Subject   385953700  TCATCTCCTCGCAATTTACATTATTTGCCATTTACC  385953665

Range 29: 386139830 to 386139930 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Subject   386139830  AAGGAATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATGCCAGGTTCCTAATCAC  386139889
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   386139890  AAATCTCATCTCCTCACAATTTACATTATTTGCCATTTGCC  386139930

Range 30: 429483731 to 429483631 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGGGATTTCTGGCACCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  60
                     |||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||
Subject   429483731  AAGGAATTTCTAGCGCCGTTGCCGGGGAGGATCTTCAACATATACCAGGTTCCTAATCAC  429483672
Query            61  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   429483671  AAATCTCATCTCCTCGCAATTTACATTATTTGCCATTTGCC  429483631

Nucleotide Sequence (101 letters)

Query number:27
Query ID:Query_27
Definition line:zxx-027
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4613.7 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18665376 to 18665476 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18665376  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTGATGT  18665435
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18665436  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  18665476

Range 2: 321661086 to 321661186 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject   321661086  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  321661145
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   321661146  GTCCTTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  321661186

Range 3: 324675803 to 324675703 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||| ||||| ||||| |||||||||||||||| || ||||
Subject   324675803  GCATCACCACTTGGTATAGATTCATCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  324675744
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   324675743  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  324675703

Range 4: 90768649 to 90768749 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||| ||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject    90768649  GCATCACGACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  90768708
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject    90768709  GTCCTTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  90768749

Range 5: 94411587 to 94411487 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||| |||||||||||||||||| ||||| ||||| |||||||||||||||| || ||||
Subject    94411587  GCATAACCACTTGGTATAGATTCATCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  94411528
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    94411527  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  94411487

Range 6: 185594030 to 185594130 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| |||||||||| ||||| || ||||
Subject   185594030  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGGAATTTCTTGATGT  185594089
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   185594090  GTCCCTCTCTTGATGCTTTTAATGCTACGGGAAATTTAGTG  185594130

Range 7: 204294425 to 204294325 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| ||||||||||||| || || ||||
Subject   204294425  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAACTTCTTGATGT  204294366
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||| ||||||||||||||||||
Subject   204294365  GTCCCTCTCTTGATGCTTTTAACGCTATGGGAAATTTAGTG  204294325

Range 8: 271204471 to 271204371 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| ||| |||||||||||| || ||||
Subject   271204471  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTATCGGTGGAAATTTCTTGATGT  271204412
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   271204411  GTCCCTCTCTTGAGGCTTTTAATGCTATGGGAAATTTAGTG  271204371

Range 9: 285354706 to 285354606 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject   285354706  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  285354647
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||| ||||||||| ||||||||||||||
Subject   285354646  GTCCCTCTCTTGATGCCTTTAATGCTTTGGGAAATTTAGTG  285354606

Range 10: 292930749 to 292930849 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject   292930749  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  292930808
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||| ||||||||| ||||||||||||||
Subject   292930809  GTCCCTCTCTTGATGCCTTTAATGCTTTGGGAAATTTAGTG  292930849

Range 11: 384168246 to 384168346 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| |||| ||||||||||| || ||||
Subject   384168246  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACTGGTGGAAATTTCTTGATGT  384168305
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   384168306  GTCCCTCTCTTGATGCTTTTAATGCTATAGGAAATTTAGTG  384168346

Range 12: 390311255 to 390311355 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||| |||||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject   390311255  GCATAACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  390311314
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||||| ||||||||||||||||
Subject   390311315  GTCCCTCTCTTGATGCTTTTAATGTTATGGGAAATTTAGTG  390311355

Range 13: 319700479 to 319700380 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 94/100(94%) 0/100(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||||||||| |||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject   319700479  GCATCACCACCTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  319700420
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGT  100
                     |||||||||||||||||||||||||||||| |||||||||
Subject   319700419  GTCCCTCTCTTGATGCTTTTAATGCTATGGAAAATTTAGT  319700380

Range 14: 418520222 to 418520123 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 94/100(94%) 0/100(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| | || ||||||||||| || ||||
Subject   418520222  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATGACTGGTGGAAATTTCTTGATGT  418520163
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject   418520162  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGT  418520123

Range 15: 390336611 to 390336709 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/+1 
Query             3  ATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGTGT  62
                     || |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||
Subject   390336611  ATAACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTTTTGATGTGT  390336670
Query            63  CCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||| ||||| ||||||||||
Subject   390336671  CCCTCTCTTGATGCTTTTAATGTTATGGAAAATTTAGTG  390336709

Range 16: 134309890 to 134309790 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||| | ||||||||| || |||||| ||| 
Subject   134309890  GCATCACCACTTGGTATAGATTCGTCCTTGATAAGATTACCGGTGTAATTTTTTTGATGC  134309831
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   134309830  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  134309790

Range 17: 248794377 to 248794477 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||||| |||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject   248794377  GCATCATCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  248794436
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     ||||  |||||||||||||||||||||||||||||||||||
Subject   248794437  GTCCTACTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  248794477

Range 18: 320376411 to 320376511 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||||||||||||||||||||||||||||  |||  |||||||||||||||| || ||||
Subject   320376411  GCATCACCACTTGGTATAGATTCGTCCTTGGTACAATTACCGGTGGAAATTTCTTGATGT  320376470
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   320376471  GTCCCTCTCTTGATGCTTTTAATGCTAGGGGAAATTTAGTG  320376511

Range 19: 384893571 to 384893471 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||||||||||||||||| |||||||||| ||| | |||||||||||||||| || ||||
Subject   384893571  GCATCACCACTTGGTATATATTCGTCCTTGATATGATTACCGGTGGAAATTTCTTGATGT  384893512
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   384893511  GTCCTTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  384893471

Range 20: 415810578 to 415810478 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| |||||| ||||||||| || ||||
Subject   415810578  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACCGATGGAAATTTCTTGATGT  415810519
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     ||||||||||||||| |||| ||||||||||||||||||||
Subject   415810518  GTCCCTCTCTTGATGATTTTCATGCTATGGGAAATTTAGTG  415810478

Range 21: 152846437 to 152846536 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 93/100(93%) 0/100(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||||||||||||||| |||||||||||| ||||| |||||||||||||||| || || |
Subject   152846437  GCATCACCACTTGGTACAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATAT  152846496
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGT  100
                     ||||||| ||||||||||||||||||||||||||||||||
Subject   152846497  GTCCCTCACTTGATGCTTTTAATGCTATGGGAAATTTAGT  152846536

Range 22: 254554569 to 254554668 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 93/100(93%) 0/100(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject   254554569  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  254554628
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGT  100
                     |||||||||||||||||||||||  | |||||||||||||
Subject   254554629  GTCCCTCTCTTGATGCTTTTAATTATGTGGGAAATTTAGT  254554668

Range 23: 394630368 to 394630467 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 93/100(93%) 0/100(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||||| |||||||||||||||| || ||||
Subject   394630368  GCATCACCACTTGGTATAGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  394630427
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGT  100
                     |||||||||| || |||||||||||||||| |||||||||
Subject   394630428  GTCCCTCTCTGGACGCTTTTAATGCTATGGTAAATTTAGT  394630467

Range 24: 418136967 to 418137066 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 93/100(93%) 0/100(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||||||||||||||||||||| |||||| ||||| |||||||||||||||| || ||||
Subject   418136967  GCATCACCACTTGGTATAGATTTGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  418137026
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGT  100
                     ||||  ||||||||||||||||||||||||||||||||||
Subject   418137027  GTCCTACTCTTGATGCTTTTAATGCTATGGGAAATTTAGT  418137066

Range 25: 86641307 to 86641207 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||| ||||||||||| ||||| |||||||||||||||| || ||| 
Subject    86641307  GCATCACCACTTGGTATTGATTCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGC  86641248
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     || | ||||||||||||||||||||||||||||||||||||
Subject    86641247  GTACTTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  86641207

Range 26: 105817276 to 105817176 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||||||||||||||||||| |||||||| ||||| |||||  ||||||||| || ||||
Subject   105817276  GCATCACCACTTGGTATAGACTCGTCCTTGATACGATTACCACTGGAAATTTCTTGATGT  105817217
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     ||||||||||||||||||||| |||||||||||||||||||
Subject   105817216  GTCCCTCTCTTGATGCTTTTAGTGCTATGGGAAATTTAGTG  105817176

Range 27: 106963488 to 106963388 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||| ||||||||||||||| |||||||| ||||| |||||||||||||||| || ||||
Subject   106963488  GCATTACCACTTGGTATAGAATCGTCCTTGATACGATTACCGGTGGAAATTTCTTGATGT  106963429
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||| ||||||||||| ||||||||||||||||||||||
Subject   106963428  GTCCCTATCTTGATGCTTGTAATGCTATGGGAAATTTAGTG  106963388

Range 28: 186072679 to 186072779 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     || |||| ||||||||||||||||||||| ||| | |||||||||||||||| || ||||
Subject   186072679  GCGTCACTACTTGGTATAGATTCGTCCTTGATATGATTACCGGTGGAAATTTCTTGATGT  186072738
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||||||||||||||||| ||||||||||
Subject   186072739  GTCCCTCTCTTGATGCTTTTAATGCTATGGTAAATTTAGTG  186072779

Range 29: 219532119 to 219532219 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     ||||||||||||||||||||||||||||| ||| | |||| ||||||||||| ||  |||
Subject   219532119  GCATCACCACTTGGTATAGATTCGTCCTTGATAAGATTACTGGTGGAAATTTCTTGGTGT  219532178
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   219532179  GTCCCTCTCTTGACGCTTTTAATGCTATGGGAAATTTAGTG  219532219

Range 30: 247959599 to 247959699 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  GCATCACCACTTGGTATAGATTCGTCCTTAATACGGTTACCGGTGGAAATTTTTTTATGT  60
                     |||||||||||||||||||||| |||||| ||||| |||||| ||||||||| || ||||
Subject   247959599  GCATCACCACTTGGTATAGATTTGTCCTTGATACGATTACCGATGGAAATTTCTTGATGT  247959658
Query            61  GTCCCTCTCTTGATGCTTTTAATGCTATGGGAAATTTAGTG  101
                     |||||||||||||||| ||||||||| ||||||||||||||
Subject   247959659  GTCCCTCTCTTGATGCCTTTAATGCTTTGGGAAATTTAGTG  247959699

Nucleotide Sequence (101 letters)

Query number:28
Query ID:Query_28
Definition line:zxx-028
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5233.2 111% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18673786 to 18673886 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18673786  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  18673845
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18673846  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  18673886

Range 2: 118124800 to 118124700 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   118124800  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  118124741
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     ||||||||||||||||||||| |||||||||||||||||||
Subject   118124740  AGATTGAAAAGTTTGAGAACATCAAAAGTATGAAACAATTG  118124700

Range 3: 158385075 to 158385175 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   158385075  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  158385134
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   158385135  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  158385175

Range 4: 446043950 to 446044050 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   446043950  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  446044009
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   446044010  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  446044050

Range 5: 74798203 to 74798304 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 101/102(99%) 1/102(1%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    74798203  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  74798262
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject    74798263  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  74798304

Range 6: 27019697 to 27019597 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    27019697  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCATGA  27019638
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    27019637  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  27019597

Range 7: 30149400 to 30149300 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Subject    30149400  ACCACCATTCTATTCCACATATTGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  30149341
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    30149340  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  30149300

Range 8: 45490904 to 45491004 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    45490904  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  45490963
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     ||||| |||||||||||||||||||||||||||||||||||
Subject    45490964  AGATTAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  45491004

Range 9: 98275279 to 98275379 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Subject    98275279  ACCACCATTCTATTCCACGTATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  98275338
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    98275339  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  98275379

Range 10: 119692903 to 119693003 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Subject   119692903  ACCACCATTCTATTCCACATATAGTGCTATATCCATGGCTCACGCTCATGTATTGCGTGA  119692962
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   119692963  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  119693003

Range 11: 167227710 to 167227810 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   167227710  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  167227769
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||| ||
Subject   167227770  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAAATG  167227810

Range 12: 333095912 to 333095812 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Subject   333095912  ACCACCATTCTATTCCACATATAGTGCTATATCCATGGCTCACGCTCATGTATTGCGTGA  333095853
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   333095852  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  333095812

Range 13: 334470397 to 334470297 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Subject   334470397  ACCACCATTCTATTCCACATATAGTGCTATATCCATGGCTCACGCTCATGTATTGCGTGA  334470338
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   334470337  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  334470297

Range 14: 348449567 to 348449667 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   348449567  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  348449626
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||| ||||||||||
Subject   348449627  AGATTGAAAAGTTTGAGAACACCAAAAGTACGAAACAATTG  348449667

Range 15: 390130536 to 390130436 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Subject   390130536  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGAATTGCGTGA  390130477
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   390130476  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  390130436

Range 16: 411333781 to 411333681 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Subject   411333781  ACCACCATTCTATTCCACATATAGTGCTATATCCATGGCTCACGCTCATGTATTGCGTGA  411333722
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   411333721  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  411333681

Range 17: 428411226 to 428411326 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Subject   428411226  ACCACCATTCTATTCCACATATAGTGCTATATCCATGGCTCACGCTCATGTATTGCGTGA  428411285
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   428411286  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  428411326

Range 18: 428719032 to 428719132 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Subject   428719032  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTAACGCTCATGTATTGCGTGA  428719091
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   428719092  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  428719132

Range 19: 458594937 to 458595037 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Subject   458594937  ACCACCATTCTATTCCACATATTGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  458594996
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   458594997  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  458595037

Range 20: 24170232 to 24170333 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    24170232  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  24170291
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject    24170292  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  24170333

Range 21: 28699209 to 28699310 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    28699209  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  28699268
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject    28699269  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  28699310

Range 22: 28763914 to 28764015 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    28763914  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  28763973
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject    28763974  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  28764015

Range 23: 29445005 to 29444904 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    29445005  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  29444946
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject    29444945  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  29444904

Range 24: 41924030 to 41924131 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    41924030  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  41924089
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject    41924090  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  41924131

Range 25: 42420359 to 42420258 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    42420359  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  42420300
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject    42420299  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  42420258

Range 26: 71966335 to 71966234 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    71966335  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  71966276
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject    71966275  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  71966234

Range 27: 90930720 to 90930621 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 98/100(98%) 0/100(0%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Subject    90930720  ACCACCATTCTATTTCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  90930661
Query            61  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject    90930660  AGATTGAAAAGTTTGAGAACACCAAAAGTATGAAACAATT  90930621

Range 28: 142482265 to 142482366 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   142482265  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  142482324
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject   142482325  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  142482366

Range 29: 156478682 to 156478783 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/+1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   156478682  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGCGTGA  156478741
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| |||||||||||||||||||||||||||||||||||
Subject   156478742  AGATTGAAAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  156478783

Range 30: 157317130 to 157317029 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 100/102(98%) 1/102(1%) +1/-1 
Query             1  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   157317130  ACCACCATTCTATTCCACATATAGTGCTATGTCCATGGCTCACGCTCATGTATTGTGTGA  157317071
Query            61  AGATTG-AAAAGTTTGAGAACACCAAAAGTATGAAACAATTG  102
                     |||||| ||||||||||||||| |||||||||||||||||||
Subject   157317070  AGATTGAAAAAGTTTGAGAACATCAAAAGTATGAAACAATTG  157317029

Nucleotide Sequence (101 letters)

Query number:29
Query ID:Query_29
Definition line:zxx-029
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5242.2 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18674616 to 18674716 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18674616  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  18674675
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18674676  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  18674716

Range 2: 160388791 to 160388891 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   160388791  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  160388850
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   160388851  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  160388891

Range 3: 301701660 to 301701560 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   301701660  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  301701601
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   301701600  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  301701560

Range 4: 496771471 to 496771371 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   496771471  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  496771412
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   496771411  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  496771371

Range 5: 26728664 to 26728764 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    26728664  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  26728723
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject    26728724  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  26728764

Range 6: 27025544 to 27025444 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    27025544  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  27025485
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject    27025484  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  27025444

Range 7: 29112323 to 29112423 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    29112323  CCACAAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  29112382
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject    29112383  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  29112423

Range 8: 82334480 to 82334380 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    82334480  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  82334421
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject    82334420  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  82334380

Range 9: 111399390 to 111399490 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   111399390  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  111399449
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   111399450  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  111399490

Range 10: 127163361 to 127163261 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   127163361  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  127163302
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   127163301  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  127163261

Range 11: 127177014 to 127176914 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   127177014  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  127176955
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   127176954  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  127176914

Range 12: 145769737 to 145769837 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   145769737  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  145769796
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   145769797  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  145769837

Range 13: 200664422 to 200664522 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   200664422  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  200664481
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   200664482  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  200664522

Range 14: 248785140 to 248785240 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   248785140  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  248785199
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   248785200  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  248785240

Range 15: 250267571 to 250267671 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   250267571  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  250267630
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   250267631  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  250267671

Range 16: 275870073 to 275870173 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   275870073  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  275870132
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   275870133  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  275870173

Range 17: 292854393 to 292854493 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   292854393  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  292854452
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   292854453  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  292854493

Range 18: 324160526 to 324160626 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   324160526  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  324160585
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   324160586  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  324160626

Range 19: 324197960 to 324198060 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   324197960  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  324198019
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   324198020  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  324198060

Range 20: 334585779 to 334585679 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   334585779  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  334585720
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   334585719  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  334585679

Range 21: 337802278 to 337802178 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   337802278  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  337802219
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   337802218  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  337802178

Range 22: 348444427 to 348444527 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   348444427  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  348444486
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   348444487  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  348444527

Range 23: 413357798 to 413357898 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   413357798  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  413357857
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   413357858  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  413357898

Range 24: 417451124 to 417451224 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   417451124  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  417451183
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   417451184  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  417451224

Range 25: 417743004 to 417742904 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Subject   417743004  CCACGAAAACCTAATTCCACCGCTGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  417742945
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   417742944  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  417742904

Range 26: 430652020 to 430651920 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   430652020  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  430651961
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   430651960  CTTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  430651920

Range 27: 430657564 to 430657464 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   430657564  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  430657505
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     |||||||| ||||||||||||||||||||||||||||||||
Subject   430657504  CTTTTCCGACGTCCTACCGGAGGGGGCATTGATCACGGAGG  430657464

Range 28: 464465229 to 464465328 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 98/100(98%) 0/100(0%) +1/+1 
Query             2  CACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGCC  61
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject   464465229  CACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGCC  464465288
Query            62  TTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     |||||||||||||| |||||||||||||||||||||||||
Subject   464465289  TTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  464465328

Range 29: 469147645 to 469147744 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 98/100(98%) 0/100(0%) +1/+1 
Query             2  CACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGCC  61
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject   469147645  CACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGCC  469147704
Query            62  TTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     |||||||||||||| |||||||||||||||||||||||||
Subject   469147705  TTTTCCGGCGTCCTGCCGGAGGGGGCATTGATCACGGAGG  469147744

Range 30: 7298503 to 7298603 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTAGGGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject     7298503  CCACGAAAACCTAATTCCACCGCCGCAACCTTCTGTACCCGTGAGATCCCATCTTGGGGC  7298562
Query            61  CTTTTCCGGCGTCCTACCGGAGGGGGCATTGATCACGGAGG  101
                     ||||||||||||||| ||||||| |||||||||||||||||
Subject     7298563  CTTTTCCGGCGTCCTGCCGGAGGTGGCATTGATCACGGAGG  7298603

Nucleotide Sequence (101 letters)

Query number:30
Query ID:Query_30
Definition line:zxx-030
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4961.8 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18676598 to 18676698 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18676598  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  18676657
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18676658  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  18676698

Range 2: 149665868 to 149665968 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   149665868  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  149665927
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   149665928  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  149665968

Range 3: 158183000 to 158183100 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   158183000  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  158183059
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   158183060  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  158183100

Range 4: 224851565 to 224851665 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   224851565  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  224851624
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   224851625  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  224851665

Range 5: 345472605 to 345472705 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   345472605  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  345472664
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   345472665  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  345472705

Range 6: 75710525 to 75710625 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    75710525  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  75710584
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     |||||||||||||||||||| |||||| |||||||||||||
Subject    75710585  TAGACTATTGCTTTGAACAACATAAAAGTCCAAATGTCCAT  75710625

Range 7: 96460899 to 96460999 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject    96460899  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAGTTATCATGTCAAAAC  96460958
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject    96460959  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  96460999

Range 8: 108637526 to 108637426 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Subject   108637526  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATCTAAATTATCATGTCAAAAC  108637467
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   108637466  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  108637426

Range 9: 128544745 to 128544845 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject   128544745  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAGTTATCATGTCAAAAC  128544804
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   128544805  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  128544845

Range 10: 135683876 to 135683776 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject   135683876  ATTTTGAAAGACATGGTTGCTTGTTGACATGCTTGAGTATTTAAATTATCATGTCAAAAC  135683817
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   135683816  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  135683776

Range 11: 157417563 to 157417463 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||
Subject   157417563  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATATCAAAAC  157417504
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   157417503  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  157417463

Range 12: 165126168 to 165126268 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Subject   165126168  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCAGGTCAAAAC  165126227
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   165126228  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  165126268

Range 13: 192186160 to 192186060 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject   192186160  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAGTTATCATGTCAAAAC  192186101
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   192186100  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  192186060

Range 14: 204870717 to 204870817 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Subject   204870717  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGGGTATTTAAATTATCATGTCAAAAC  204870776
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   204870777  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  204870817

Range 15: 218041903 to 218041803 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Subject   218041903  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTTTCATGTCAAAAC  218041844
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   218041843  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  218041803

Range 16: 249946667 to 249946567 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject   249946667  ATTTTGAAAGACATGGTTGCTTGTTTATATGCTTGAGTATTTAAATTATCATGTCAAAAC  249946608
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   249946607  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  249946567

Range 17: 254656219 to 254656119 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Subject   254656219  ATTTTGAAAGACATGGTTGCTTGTTGATATGTTTGAGTATTTAAATTATCATGTCAAAAC  254656160
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   254656159  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  254656119

Range 18: 294160207 to 294160307 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   294160207  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  294160266
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||| ||||||| |||||||||||||
Subject   294160267  TAGACTATTGCTTTGAACATTATAAAAGTCCAAATGTCCAT  294160307

Range 19: 321664014 to 321664114 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| 
Subject   321664014  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAACTATCATGTCAAAAG  321664073
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   321664074  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  321664114

Range 20: 332928502 to 332928602 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject   332928502  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAGTTATCATGTCAAAAC  332928561
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   332928562  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  332928602

Range 21: 415328763 to 415328663 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Subject   415328763  ATTTTGAAAGACATGGTTCCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  415328704
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   415328703  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  415328663

Range 22: 454952749 to 454952849 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   454952749  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  454952808
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     |||||||||||||||| |||||||||| |||||||||||||
Subject   454952809  TAGACTATTGCTTTGATCAATATAAAAGTCCAAATGTCCAT  454952849

Range 23: 60052257 to 60052356 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 96/100(96%) 0/100(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    60052257  ATTTTGAAAGACATGGTTGCTTGTTGATCTGCTTGAGTATTTAAATTATCATGTCAAAAC  60052316
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCA  100
                     ||||||||||||||||||||||||||| ||||||||||||
Subject    60052317  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCA  60052356

Range 24: 194070737 to 194070835 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/+1 
Query             3  TTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAACTA  62
                     ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Subject   194070737  TTTGAAAAACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAACTA  194070796
Query            63  GACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||| |||||||||||||
Subject   194070797  GACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  194070835

Range 25: 248819876 to 248819975 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 97/101(96%) 1/101(1%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   248819876  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  248819935
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     |||| |||||||||||||||||||||| |||||||||||||
Subject   248819936  TAGA-TATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  248819976

Range 26: 49385928 to 49386028 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Subject    49385928  ATTTTGAAAGACATGGTTGCTTGTTCATATGCTTGAGTATTTAAATTATCATGTCAAAAC  49385987
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     |||||||||||||||||||| |||||| |||||||||||||
Subject    49385988  TAGACTATTGCTTTGAACAAAATAAAAGTCCAAATGTCCAT  49386028

Range 27: 62384084 to 62383984 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject    62384084  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAGTTATCATGTCAAAAC  62384025
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     |||||||||||||||| |||||||||| |||||||||||||
Subject    62384024  TAGACTATTGCTTTGAGCAATATAAAAGTCCAAATGTCCAT  62383984

Range 28: 77960990 to 77960890 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||| ||||
Subject    77960990  ATTTTGAAAGACAAGGTTGCTTGTCGATATGCTTGAGTATTTAAATTATCATGTCAAAAC  77960931
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject    77960930  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  77960890

Range 29: 84709017 to 84709117 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject    84709017  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAGTTATCATGTCAAAAC  84709076
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     || |||||||||||||||||||||||| |||||||||||||
Subject    84709077  TATACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  84709117

Range 30: 102928459 to 102928559 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  ATTTTCAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAATTATCATGTCGAAAC  60
                     ||||| |||||||||||||||||||||||||||||||||||||| |||||| ||| ||||
Subject   102928459  ATTTTGAAAGACATGGTTGCTTGTTGATATGCTTGAGTATTTAAGTTATCACGTCAAAAC  102928518
Query            61  TAGACTATTGCTTTGAACAATATAAAACTCCAAATGTCCAT  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   102928519  TAGACTATTGCTTTGAACAATATAAAAGTCCAAATGTCCAT  102928559

Nucleotide Sequence (101 letters)

Query number:31
Query ID:Query_31
Definition line:zxx-031
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 909.8 101% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 7

Range 1: 18681566 to 18681666 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTACTAACTACTAGTAGCGTGGGGGCATAAACAAACACTACTGGTAAACATCTACCTAT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18681566  ACTACTAACTACTAGTAGCGTGGGGGCATAAACAAACACTACTGGTAAACATCTATCTAT  18681625
Query            61  AAGCATTTTCCTAGTAGTGGAGGAGAGCACAACCCATCAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18681626  AAGCATTTTCCTAGTAGTGGAGGAGAGCACAACCCATCAGG  18681666

Range 2: 313807634 to 313807721 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 83/88(94%) 1/88(1%) +1/+1 
Query             1  ACTACTAACTACTAGTAGCGTGGGGGCATAAACAAACACTACTGGTAAACATCTACCTAT  60
                     |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||
Subject   313807634  ACTACTAACTACTAGTAGCGTGGGGGCATAAAAAAACGCTACTGGTAAATATCTACCTAT  313807693
Query            61  AAGCATTTTCCTAGTAGTG-GAGGAGAG  88
                     ||||||||||||||||||| ||||| ||
Subject   313807694  AAGCATTTTCCTAGTAGTGTGAGGAAAG  313807721

Range 3: 84997084 to 84997005 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
127.5 bits(140) 0.0 76/80(95%) 0/80(0%) +1/-1 
Query             1  ACTACTAACTACTAGTAGCGTGGGGGCATAAACAAACACTACTGGTAAACATCTACCTAT  60
                     ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| ||||
Subject    84997084  ACTACTAACTACTAGTAGCGTGGGGTCATAAACAAACGCTACTGGTAAACTTCTATCTAT  84997025
Query            61  AAGCATTTTCCTAGTAGTGG  80
                     ||||||||||||||||||||
Subject    84997024  AAGCATTTTCCTAGTAGTGG  84997005

Range 4: 279425779 to 279425701 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
121.2 bits(133) 0.0 74/79(94%) 0/79(0%) +1/-1 
Query             1  ACTACTAACTACTAGTAGCGTGGGGGCATAAACAAACACTACTGGTAAACATCTACCTAT  60
                     ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| ||||
Subject   279425779  ACTACTAACTACTAGTAGCGTGGGGTCATAAACAAACGCTACTGGTAAACTTCTATCTAT  279425720
Query            61  AAGCATTTTCCTAGTAGTG  79
                     |||||||||||| ||||||
Subject   279425719  AAGCATTTTCCTGGTAGTG  279425701

Range 5: 484154214 to 484154136 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
121.2 bits(133) 0.0 74/79(94%) 0/79(0%) +1/-1 
Query             1  ACTACTAACTACTAGTAGCGTGGGGGCATAAACAAACACTACTGGTAAACATCTACCTAT  60
                     ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| ||||
Subject   484154214  ACTACTAACTACTAGTAGCGTGGGGTCATAAACAAACGCTACTGGTAAACTTCTATCTAT  484154155
Query            61  AAGCATTTTCCTAGTAGTG  79
                     |||| ||||||||||||||
Subject   484154154  AAGCGTTTTCCTAGTAGTG  484154136

Range 6: 69689751 to 69689669 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
114.9 bits(126) 0.0 75/83(90%) 0/83(0%) +1/-1 
Query             1  ACTACTAACTACTAGTAGCGTGGGGGCATAAACAAACACTACTGGTAAACATCTACCTAT  60
                     |||||||| ||||||||||||| || ||||||||||| |||||||||||  |||| ||||
Subject    69689751  ACTACTAATTACTAGTAGCGTGTGGTCATAAACAAACGCTACTGGTAAAATTCTATCTAT  69689692
Query            61  AAGCATTTTCCTAGTAGTGGAGG  83
                     ||||||||||||||||||| |||
Subject    69689691  AAGCATTTTCCTAGTAGTGTAGG  69689669

Range 7: 250370752 to 250370830 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
112.2 bits(123) 0.0 72/79(91%) 0/79(0%) +1/+1 
Query             1  ACTACTAACTACTAGTAGCGTGGGGGCATAAACAAACACTACTGGTAAACATCTACCTAT  60
                     ||||||||||||||||||||||||| ||||||||||| |||  ||||||| |||| | ||
Subject   250370752  ACTACTAACTACTAGTAGCGTGGGGTCATAAACAAACGCTATAGGTAAACTTCTATCGAT  250370811
Query            61  AAGCATTTTCCTAGTAGTG  79
                     |||||||||||||||||||
Subject   250370812  AAGCATTTTCCTAGTAGTG  250370830

Nucleotide Sequence (101 letters)

Query number:32
Query ID:Query_32
Definition line:zxx-032
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 178.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 1

Range 1: 18730990 to 18731090 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TCTCTTGTCGATAGCCAATATACTATAAATCCCGCGCCAAATCTCTCCTTGCACTCTATT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18730990  TCTCTTGTCGATAGCCAATATACTATAAATCCCGCGCCAAATCTCTCCTTGCACTGTATT  18731049
Query            61  TAGAGAAAAATCGTAATTATCACAACAAAATCAGAGTGGCG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18731050  TAGAGAAAAATCGTAATTATCACAACAAAATCAGAGTGGCG  18731090

Nucleotide Sequence (101 letters)

Query number:33
Query ID:Query_33
Definition line:zxx-033
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5272.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18768778 to 18768878 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18768778  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGGTCAG  18768837
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18768838  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  18768878

Range 2: 18775686 to 18775786 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject    18775686  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  18775745
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18775746  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  18775786

Range 3: 133388802 to 133388702 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   133388802  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  133388743
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   133388742  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  133388702

Range 4: 185836753 to 185836653 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   185836753  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  185836694
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   185836693  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  185836653

Range 5: 297919822 to 297919722 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   297919822  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  297919763
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   297919762  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  297919722

Range 6: 455083287 to 455083187 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   455083287  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  455083228
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   455083227  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  455083187

Range 7: 96079505 to 96079604 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject    96079505  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  96079564
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject    96079565  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  96079604

Range 8: 145144025 to 145144124 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   145144025  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  145144084
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject   145144085  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  145144124

Range 9: 224274841 to 224274940 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   224274841  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  224274900
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject   224274901  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  224274940

Range 10: 299667437 to 299667536 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   299667437  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  299667496
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject   299667497  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  299667536

Range 11: 340156184 to 340156085 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   340156184  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  340156125
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject   340156124  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTT  340156085

Range 12: 1399406 to 1399306 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject     1399406  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  1399347
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject     1399346  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  1399306

Range 13: 9888314 to 9888414 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject     9888314  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  9888373
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject     9888374  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  9888414

Range 14: 26629407 to 26629507 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject    26629407  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  26629466
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject    26629467  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  26629507

Range 15: 54172184 to 54172284 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject    54172184  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  54172243
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject    54172244  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  54172284

Range 16: 69828139 to 69828239 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject    69828139  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  69828198
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject    69828199  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  69828239

Range 17: 74127644 to 74127744 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject    74127644  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  74127703
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject    74127704  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  74127744

Range 18: 107719736 to 107719636 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   107719736  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  107719677
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   107719676  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  107719636

Range 19: 118204698 to 118204798 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   118204698  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  118204757
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   118204758  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  118204798

Range 20: 126328780 to 126328680 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   126328780  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  126328721
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   126328720  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  126328680

Range 21: 132714764 to 132714864 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   132714764  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  132714823
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   132714824  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  132714864

Range 22: 142755276 to 142755176 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   142755276  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  142755217
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   142755216  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  142755176

Range 23: 172864859 to 172864959 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   172864859  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  172864918
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   172864919  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  172864959

Range 24: 178030645 to 178030745 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   178030645  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  178030704
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   178030705  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  178030745

Range 25: 210988921 to 210988821 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   210988921  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  210988862
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   210988861  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  210988821

Range 26: 255207069 to 255207169 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   255207069  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  255207128
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   255207129  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  255207169

Range 27: 276917776 to 276917676 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   276917776  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  276917717
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   276917716  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  276917676

Range 28: 282759688 to 282759788 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   282759688  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  282759747
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   282759748  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  282759788

Range 29: 283899438 to 283899338 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   283899438  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  283899379
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   283899378  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  283899338

Range 30: 293142608 to 293142708 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CAACAAGTTCTATAGCTAAAATATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  60
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   293142608  CAACAAGTTCTATAGCTAAAAGATGGAGGAGAATCGCTCAACTAGTGAGCATGTGCTCAG  293142667
Query            61  ATTGTCTGGGTACTACAATTGCTTGAATCAAGTGGGAGTTT  101
                     ||||||||||||||||||| |||||||||||||||||||||
Subject   293142668  ATTGTCTGGGTACTACAATCGCTTGAATCAAGTGGGAGTTT  293142708

Nucleotide Sequence (101 letters)

Query number:34
Query ID:Query_34
Definition line:zxx-034
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5111.5 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18770967 to 18771067 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18770967  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  18771026
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18771027  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  18771067

Range 2: 54065906 to 54065806 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    54065906  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  54065847
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    54065846  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  54065806

Range 3: 106980911 to 106981011 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   106980911  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  106980970
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   106980971  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  106981011

Range 4: 118974894 to 118974794 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   118974894  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  118974835
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   118974834  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  118974794

Range 5: 172274879 to 172274979 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   172274879  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  172274938
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   172274939  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  172274979

Range 6: 206657330 to 206657430 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   206657330  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  206657389
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   206657390  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  206657430

Range 7: 229911153 to 229911053 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   229911153  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  229911094
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   229911093  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  229911053

Range 8: 390998883 to 390998783 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   390998883  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  390998824
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   390998823  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  390998783

Range 9: 440029843 to 440029943 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   440029843  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  440029902
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   440029903  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  440029943

Range 10: 8411717 to 8411617 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject     8411717  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  8411658
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject     8411657  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  8411617

Range 11: 12949423 to 12949523 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject    12949423  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  12949482
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    12949483  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  12949523

Range 12: 14495039 to 14495139 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject    14495039  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  14495098
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    14495099  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  14495139

Range 13: 14550463 to 14550563 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject    14550463  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  14550522
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    14550523  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  14550563

Range 14: 75977970 to 75977870 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject    75977970  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  75977911
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    75977910  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  75977870

Range 15: 86750361 to 86750261 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject    86750361  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  86750302
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    86750301  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  86750261

Range 16: 174416562 to 174416462 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject   174416562  CGGCAAGCAATTGAGAATAAATGGATCATCAAGAGGAAGACGGACGCTGATAGTAGTATC  174416503
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   174416502  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  174416462

Range 17: 175708777 to 175708677 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject   175708777  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  175708718
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   175708717  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  175708677

Range 18: 334910172 to 334910272 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   334910172  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  334910231
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||| ||||||||||| |||
Subject   334910232  ACTATCTACAAAGCTAGAATTGTCGTAAAAAGGTTTTCGAC  334910272

Range 19: 401824104 to 401824004 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject   401824104  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  401824045
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   401824044  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  401824004

Range 20: 430056654 to 430056554 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject   430056654  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  430056595
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   430056594  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  430056554

Range 21: 484504869 to 484504769 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject   484504869  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  484504810
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   484504809  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  484504769

Range 22: 486015665 to 486015565 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject   486015665  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  486015606
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   486015605  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  486015565

Range 23: 490082781 to 490082878 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.0 bits(186) 0.0 96/98(98%) 0/98(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Subject   490082781  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  490082840
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTT  98
                     ||||||||||||||||||||||||||||||||||||||
Subject   490082841  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTT  490082878

Range 24: 430084785 to 430084883 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             3  GCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATCAC  62
                     |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Subject   430084785  GCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATCAC  430084844
Query            63  TATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||| |||
Subject   430084845  TATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  430084883

Range 25: 498457824 to 498457725 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 98/101(97%) 1/101(1%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Subject   498457824  CGGCAAGCAATTGAGAATAA-TGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  498457765
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   498457764  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  498457724

Range 26: 49710722 to 49710822 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||
Subject    49710722  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACAGACGCTGATAGTAGTATC  49710781
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    49710782  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  49710822

Range 27: 96756963 to 96756863 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||
Subject    96756963  CGGCAAGCAATTGAGAATAAATGAATTGTCAAGAGGAAGACGGACGCTGATAGTAGTATC  96756904
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    96756903  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  96756863

Range 28: 124146294 to 124146394 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||
Subject   124146294  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGACGGACGCTGACAGTAGTATC  124146353
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   124146354  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  124146394

Range 29: 126326617 to 126326517 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | 
Subject   126326617  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTAGTGTT  126326558
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   126326557  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  126326517

Range 30: 184840446 to 184840546 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CGGCAAGCAATTGAGAATAAATGGATCGTCAAGAGGAAGACGGACGCTGATAGTATTATC  60
                     |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||
Subject   184840446  CGGCAAGCAATTGAGAATAAATGGATTGTCAAGAGGAAGATGGACGCTGATAGTAGTATC  184840505
Query            61  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTTGAC  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   184840506  ACTATCTACAAAGCTAGAATTGTCGCAAAAAGGTTTTCGAC  184840546

Nucleotide Sequence (101 letters)

Query number:35
Query ID:Query_35
Definition line:zxx-035
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5236.8 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 146728237 to 146728137 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Subject   146728237  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  146728178
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   146728177  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  146728137

Range 2: 3701580 to 3701480 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject     3701580  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  3701521
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     3701520  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  3701480

Range 3: 3708589 to 3708489 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject     3708589  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  3708530
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     3708529  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  3708489

Range 4: 8408761 to 8408661 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject     8408761  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  8408702
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     8408701  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  8408661

Range 5: 8415785 to 8415685 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject     8415785  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  8415726
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     8415725  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  8415685

Range 6: 8621710 to 8621810 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject     8621710  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  8621769
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     8621770  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  8621810

Range 7: 12544252 to 12544352 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    12544252  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  12544311
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    12544312  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  12544352

Range 8: 12551254 to 12551354 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    12551254  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  12551313
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    12551314  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  12551354

Range 9: 12977985 to 12977885 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    12977985  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  12977926
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    12977925  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  12977885

Range 10: 18773936 to 18774036 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Subject    18773936  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCGATGC  18773995
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18773996  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  18774036

Range 11: 39918817 to 39918717 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    39918817  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  39918758
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    39918757  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  39918717

Range 12: 39925809 to 39925709 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    39925809  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  39925750
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    39925749  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  39925709

Range 13: 47510309 to 47510409 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    47510309  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  47510368
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    47510369  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  47510409

Range 14: 48627540 to 48627440 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    48627540  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  48627481
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    48627480  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  48627440

Range 15: 51032362 to 51032262 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    51032362  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  51032303
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    51032302  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  51032262

Range 16: 54177196 to 54177296 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    54177196  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  54177255
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    54177256  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  54177296

Range 17: 67544609 to 67544709 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    67544609  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  67544668
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    67544669  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  67544709

Range 18: 78150678 to 78150778 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    78150678  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  78150737
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    78150738  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  78150778

Range 19: 82291130 to 82291230 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    82291130  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  82291189
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    82291190  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  82291230

Range 20: 86754428 to 86754328 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    86754428  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  86754369
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    86754368  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  86754328

Range 21: 88102581 to 88102481 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    88102581  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  88102522
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    88102521  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  88102481

Range 22: 88579961 to 88580061 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    88579961  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  88580020
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    88580021  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  88580061

Range 23: 91810490 to 91810590 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    91810490  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  91810549
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    91810550  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  91810590

Range 24: 96787506 to 96787606 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    96787506  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  96787565
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    96787566  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  96787606

Range 25: 97153366 to 97153266 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject    97153366  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  97153307
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    97153306  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  97153266

Range 26: 101611110 to 101611210 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject   101611110  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  101611169
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   101611170  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101611210

Range 27: 102512230 to 102512130 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject   102512230  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  102512171
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   102512170  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  102512130

Range 28: 104189617 to 104189517 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject   104189617  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  104189558
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   104189557  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  104189517

Range 29: 109864939 to 109864839 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject   109864939  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  109864880
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   109864879  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  109864839

Range 30: 114298737 to 114298837 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CGCTTCCGCTGTCGATCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTCCTATGC  60
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject   114298737  CGCTTCCGCTGTCGGTCTACGAGGGTACGTGGACAACACTCTCCCCTCTCGTTGCTATGC  114298796
Query            61  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   114298797  ATCACCATGATCTTGCGTGTGCGTAGGAATTTTTTTGAAAT  114298837

Nucleotide Sequence (101 letters)

Query number:36
Query ID:Query_36
Definition line:zxx-036
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5262.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 12818661 to 12818561 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    12818661  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  12818602
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    12818601  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  12818561

Range 2: 18776834 to 18776934 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18776834  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCGTCCT  18776893
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18776894  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  18776934

Range 3: 30621822 to 30621722 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    30621822  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  30621763
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    30621762  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  30621722

Range 4: 138862730 to 138862630 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject   138862730  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  138862671
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   138862670  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  138862630

Range 5: 501177728 to 501177628 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject   501177728  AGATTATGAAAAGTTTCATCAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  501177669
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   501177668  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  501177628

Range 6: 506501064 to 506500964 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject   506501064  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  506501005
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   506501004  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  506500964

Range 7: 50546483 to 50546384 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    50546483  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  50546424
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAG  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject    50546423  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAG  50546384

Range 8: 1706364 to 1706264 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject     1706364  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  1706305
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     1706304  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  1706264

Range 9: 2482375 to 2482475 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject     2482375  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  2482434
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     2482435  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  2482475

Range 10: 3018727 to 3018827 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject     3018727  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  3018786
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     3018787  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  3018827

Range 11: 5444488 to 5444388 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject     5444488  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  5444429
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     5444428  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  5444388

Range 12: 7312921 to 7312821 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject     7312921  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  7312862
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     7312861  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  7312821

Range 13: 9701665 to 9701765 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject     9701665  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  9701724
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject     9701725  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  9701765

Range 14: 10319568 to 10319468 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    10319568  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  10319509
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    10319508  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  10319468

Range 15: 11783805 to 11783705 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    11783805  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  11783746
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    11783745  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  11783705

Range 16: 13742878 to 13742978 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    13742878  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  13742937
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject    13742938  GATAAACGATGAAGATTATCCATGGTTATGGCACAATAAGC  13742978

Range 17: 14193685 to 14193585 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    14193685  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  14193626
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    14193625  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  14193585

Range 18: 15045099 to 15045199 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    15045099  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  15045158
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    15045159  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  15045199

Range 19: 16367965 to 16368065 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    16367965  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  16368024
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    16368025  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  16368065

Range 20: 19000906 to 19001006 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Subject    19000906  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGAACCAAGCATCCT  19000965
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    19000966  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  19001006

Range 21: 19238887 to 19238787 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    19238887  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  19238828
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    19238827  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  19238787

Range 22: 21870955 to 21870855 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    21870955  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  21870896
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    21870895  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  21870855

Range 23: 22203612 to 22203512 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    22203612  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  22203553
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    22203552  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  22203512

Range 24: 22617193 to 22617093 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    22617193  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  22617134
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    22617133  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  22617093

Range 25: 25308109 to 25308009 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    25308109  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  25308050
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    25308049  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  25308009

Range 26: 25328142 to 25328042 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    25328142  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  25328083
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    25328082  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  25328042

Range 27: 25348177 to 25348077 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    25348177  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  25348118
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    25348117  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  25348077

Range 28: 26657653 to 26657553 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    26657653  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  26657594
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    26657593  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  26657553

Range 29: 26737712 to 26737612 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    26737712  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  26737653
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    26737652  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  26737612

Range 30: 30384231 to 30384331 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AGATTATGAAAAGTTTCATTAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  60
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    30384231  AGATTATGAAAAGTTTCATGAAATTCCTCCCTTCAAAGTCAAGGCTGACCCAAGCATCCT  30384290
Query            61  GATAAACGATGAAGATTATCCATGGTTATGGCGCAATAAGC  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    30384291  GATAAACGATGAAGATTATCCATGGTTACGGCGCAATAAGC  30384331

Nucleotide Sequence (101 letters)

Query number:37
Query ID:Query_37
Definition line:zxx-037
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4667.8 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18800661 to 18800761 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18800661  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGAAATA  18800720
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18800721  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  18800761

Range 2: 156966670 to 156966572 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/-1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Subject   156966670  AAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATAGA  156966611
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     | |||||||||||||| ||||||||||||||||||||||
Subject   156966610  AAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  156966572

Range 3: 189960614 to 189960712 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/+1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Subject   189960614  AAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATAGA  189960673
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     | |||||||||||||| ||||||||||||||||||||||
Subject   189960674  AAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  189960712

Range 4: 208032261 to 208032361 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject   208032261  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGGAATA  208032320
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| ||||||| |||||| ||||||||||||||||||| ||
Subject   208032321  GAAAAACCTCCCGATAATGATAATGAAACTTCTATCTCAGA  208032361

Range 5: 227323459 to 227323559 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Subject   227323459  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATA  227323518
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| ||||||||||||||||||| ||
Subject   227323519  GAAAAACCTCCTGATAATGATAATGAAACTTCTATCTCAGA  227323559

Range 6: 251425203 to 251425301 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     |||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||
Subject   251425203  AAAGAAAAAGAAGAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATAGA  251425262
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     | |||||||||||||| ||||||||||||||||||||||
Subject   251425263  AAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  251425301

Range 7: 383101951 to 383101853 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/-1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Subject   383101951  AAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATAGA  383101892
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                       |||||||||||||| ||||||||||||||||||||||
Subject   383101891  GAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  383101853

Range 8: 413848183 to 413848085 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/-1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Subject   413848183  AAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATAGA  413848124
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     | |||||||||||||| | ||||||||||||||||||||
Subject   413848123  AAAACCTCCTGATAATGAAAATGAAACTTCTATCTCTGA  413848085

Range 9: 105763572 to 105763472 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||
Subject   105763572  AGAAAGAACAAGAAAAAGAAAAATGATAGGACTTTGCACACTTCTAGTGAACCTGAAATA  105763513
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| ||||||||||||||||||||||
Subject   105763512  GAAAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  105763472

Range 10: 108644789 to 108644689 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| ||||
Subject   108644789  AGAAAGAAAAAGAAAAAGAGAAACGATAGGACTTTGCATACTTCTAGTGAACCTGAAATA  108644730
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| ||||||||||||||||||||||
Subject   108644729  GAAAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  108644689

Range 11: 253657206 to 253657301 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 92/96(96%) 0/96(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Subject   253657206  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATA  253657265
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATC  96
                     ||| |||||||||||||| |||||||||||||||||
Subject   253657266  GAAAAACCTCCTGATAATGATAATGAAACTTCTATC  253657301

Range 12: 321143920 to 321144020 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||||||||||| ||||  |||||||||||||||| ||||
Subject   321143920  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCTCACTTCTAGTGAACCTGAAATA  321143979
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| ||||||||||||||||||||||
Subject   321143980  GAAAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  321144020

Range 13: 342442181 to 342442281 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||||
Subject   342442181  AGAAAGAAAAAGAAGAAGAAAAATGATAGGACTTTGCATGCTTCTAGTGAATCTGGAATA  342442240
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| ||||||||||||||||||||||
Subject   342442241  GAAAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  342442281

Range 14: 426548402 to 426548302 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||
Subject   426548402  AGAAAGAAAAAGAAGAAGAAAAACGATAGGACTTTGCATACTTCTAGTGAACCTGAAATA  426548343
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| ||||||||||||||||||||||
Subject   426548342  GAAAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  426548302

Range 15: 435913668 to 435913768 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||
Subject   435913668  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCACACTTCTAGTGAACCTGAAATA  435913727
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||  |||||||||||||| ||||||||||||||||||||||
Subject   435913728  GAGAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  435913768

Range 16: 151618856 to 151618758 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/-1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     |||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||
Subject   151618856  AAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCACACTTCTAGTGAACCTGAAATAGA  151618797
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     | |||||||||||||| | ||||||||||||||||||||
Subject   151618796  AAAACCTCCTGATAATGAAAATGAAACTTCTATCTCTGA  151618758

Range 17: 208831208 to 208831306 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/+1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     || ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Subject   208831208  AACGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATAGA  208831267
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     | |||||||||||||| ||||||||| ||||||||||||
Subject   208831268  AAAACCTCCTGATAATGATAATGAAATTTCTATCTCTGA  208831306

Range 18: 248508905 to 248509003 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/+1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     |||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||
Subject   248508905  AAAGAAAAAGAAGAAGAAAAATGATAGGACTTTGCATACTTATAGTGAACCTGAAATAGA  248508964
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     | |||||||||||||| ||||||||||||||||||||||
Subject   248508965  AAAACCTCCTGATAATGATAATGAAACTTCTATCTCTGA  248509003

Range 19: 265775892 to 265775990 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/+1 
Query             3  AAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGA  62
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |
Subject   265775892  AAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATAAA  265775951
Query            63  AGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     | |||||||||||||| ||||||||||||||||||| ||
Subject   265775952  AAAACCTCCTGATAATGATAATGAAACTTCTATCTCAGA  265775990

Range 20: 81932437 to 81932337 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| ||||
Subject    81932437  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCACACTCCTAGTGAACCTGAAATA  81932378
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| | ||||||||||||||||||||
Subject    81932377  GAAAAACCTCCTGATAATGAAAATGAAACTTCTATCTCTGA  81932337

Range 21: 128760266 to 128760366 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||
Subject   128760266  AGAAAGAAAAAGGAAAAGAAAAATGATAGGACTTTGCACACTTCTAGTGAACCTGAAATA  128760325
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| | ||||||||||||||||||||
Subject   128760326  GAAAAACCTCCTGATAATGAAAATGAAACTTCTATCTCTGA  128760366

Range 22: 152000484 to 152000584 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||
Subject   152000484  AGAAAGAAAAATAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATA  152000543
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| ||||||| |||||| | ||||||||||||||||||||
Subject   152000544  GAAAAACCTCCAGATAATGAAAATGAAACTTCTATCTCTGA  152000584

Range 23: 179099408 to 179099308 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||
Subject   179099408  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACTTTGCACACTTCTAGTGAACCTGAAATA  179099349
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| | ||||||||||||||||| ||
Subject   179099348  GAAAAACCTCCTGATAATGAAAATGAAACTTCTATCTCAGA  179099308

Range 24: 206860722 to 206860822 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||
Subject   206860722  AGAAAGAAAAAGAAAAAGAAAAATGACAGGACTTTGCATACTTCTAGTGAACCTGAAATA  206860781
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| | ||||||||||||||||| ||
Subject   206860782  GAAAAACCTCCTGATAATGACAATGAAACTTCTATCTCAGA  206860822

Range 25: 218707454 to 218707354 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     ||||||||||||||||||||||||||||||||  | ||||||||||||||||||| ||||
Subject   218707454  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACTCTACATACTTCTAGTGAACCTGAAATA  218707395
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| ||||||||| ||||||||||||
Subject   218707394  GAAAAACCTCCTGATAATGATAATGAAATTTCTATCTCTGA  218707354

Range 26: 219717493 to 219717393 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| | ||
Subject   219717493  AGAAAGAAAAAGAAGAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAACTA  219717434
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||||||||| ||||||||||||||||||| ||
Subject   219717433  GAAAAACCTCCTGATAATGATAATGAAACTTCTATCTCAGA  219717393

Range 27: 330933115 to 330933215 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     |||||||||||||||||||||||| ||||| | |||||||||||||||||||||| ||||
Subject   330933115  AGAAAGAAAAAGAAAAAGAAAAATTATAGGCCTTTGCATACTTCTAGTGAACCTGAAATA  330933174
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     ||| |||||||| ||||| ||||||||||||||||||||||
Subject   330933175  GAAAAACCTCCTAATAATGATAATGAAACTTCTATCTCTGA  330933215

Range 28: 184709005 to 184708908 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.0 bits(166) 0.0 92/98(94%) 0/98(0%) +1/-1 
Query             1  AGAAAGAAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATA  60
                     ||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||
Subject   184709005  AGAAAGAAAAATAAAAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATA  184708946
Query            61  GAAGAACCTCCTGATAATAATAATGAAACTTCTATCTC  98
                     ||  |||||||||||||| |||||||||||||||||||
Subject   184708945  GAGAAACCTCCTGATAATGATAATGAAACTTCTATCTC  184708908

Range 29: 158081216 to 158081122 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 90/95(95%) 0/95(0%) +1/-1 
Query             7  AAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGAAGAA  66
                     |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||
Subject   158081216  AAAAAGAACAAGAAAAATGATAGGACTTTGCATACTTCTAGTGAACCTGAAATAGAAAAA  158081157
Query            67  CCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     |||||||||||| ||||||||||||||||||||||
Subject   158081156  CCTCCTGATAATGATAATGAAACTTCTATCTCTGA  158081122

Range 30: 389120877 to 389120783 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 90/95(95%) 0/95(0%) +1/-1 
Query             7  AAAAAGAAAAAGAAAAATGATAGGACATTGCATACTTCTAGTGAACCTGGAATAGAAGAA  66
                     |||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||| ||
Subject   389120877  AAAAAGAAAAAGAAAAATGATAGGACTTTGCATGCTTCTAGTGAACCTGAAATAGAAAAA  389120818
Query            67  CCTCCTGATAATAATAATGAAACTTCTATCTCTGA  101
                     |||||||| ||||||||||||||||||||||||||
Subject   389120817  CCTCCTGACAATAATAATGAAACTTCTATCTCTGA  389120783

Nucleotide Sequence (101 letters)

Query number:38
Query ID:Query_38
Definition line:zxx-038
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4970.8 113% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18840637 to 18840737 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18840637  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCCCTAC  18840696
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18840697  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  18840737

Range 2: 371232652 to 371232552 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Subject   371232652  CCTCCGAACAGCTGACCGGCTCTCGCGGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  371232593
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   371232592  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  371232552

Range 3: 69954469 to 69954569 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Subject    69954469  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGACTTTCTCTAC  69954528
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    69954529  TGAGGTGCTCATCCGGATGATCCGGGACACAATCGCAGTAG  69954569

Range 4: 131166994 to 131166893 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 99/102(97%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   131166994  CCTCTCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  131166935
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||||||||||||||||||||
Subject   131166934  CTGAGGTGCTCGTCCGGAAGAACCGGGACACAATCGCAGTAG  131166893

Range 5: 190957259 to 190957360 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 99/102(97%) 1/102(1%) +1/+1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   190957259  CCTCTCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  190957318
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     |||||||||||||||||  |||||||||||||||||||||||
Subject   190957319  CTGAGGTGCTCATCCGGGAGAACCGGGACACAATCGCAGTAG  190957360

Range 6: 293095903 to 293095802 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 99/102(97%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   293095903  CCTCACGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  293095844
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||||||||||||||||||||
Subject   293095843  CTGAGGTGCTCGTCCGGAAGAACCGGGACACAATCGCAGTAG  293095802

Range 7: 314465595 to 314465494 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 99/102(97%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Subject   314465595  CCTCTCGAACAGCTGACCAGCTCTCGCCGTATCATGACAGTCAGTTTTCGGCTTTCTCTA  314465536
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||||||||||||||||||||||||||||||||||
Subject   314465535  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  314465494

Range 8: 393821630 to 393821532 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             3  TCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTACTG  62
                     |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   393821630  TCCGAAGAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTACTG  393821571
Query            63  AGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||| |||||||||||||||| |||||
Subject   393821570  AGGTGCTCATCCGGATAAACCGGGACACAATCGAAGTAG  393821532

Range 9: 126808454 to 126808354 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||
Subject   126808454  CCTCCGAAGAGCTGACCGGCTCACGCCGCATCATGACAGTCAGTTTTCGACTTTCTCTAC  126808395
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     ||||||||||||||||||||||| |||||||||||||||||
Subject   126808394  TGAGGTGCTCATCCGGATGAACCAGGACACAATCGCAGTAG  126808354

Range 10: 131737817 to 131737917 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   131737817  CCTCCGAAGAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  131737876
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||| ||||||||||| |||| |||||||||||||||||
Subject   131737877  TGAGGTTCTCATCCGGATAAACCAGGACACAATCGCAGTAG  131737917

Range 11: 142377291 to 142377391 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   142377291  CCTCCGAATAGCTGACCGGCTCACGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  142377350
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||| |||| |||||||||||||||||
Subject   142377351  TGAGGTGCTCATCCGGATAAACCAGGACACAATCGCAGTAG  142377391

Range 12: 176192128 to 176192028 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||
Subject   176192128  CCTCCGAAGAGCTGACCGGCTCTCGTCGTATCATGACAGTCAGTTTTCGGCTTTCTCTAC  176192069
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     ||||||||||||||||||||||| |||||||||||||||||
Subject   176192068  TGAGGTGCTCATCCGGATGAACCAGGACACAATCGCAGTAG  176192028

Range 13: 244937048 to 244936948 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   244937048  CCTCCGAAGAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  244936989
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||| |||| ||||||||| |||||||
Subject   244936988  TGAGGTGCTCATCCGGATAAACCAGGACACAATTGCAGTAG  244936948

Range 14: 388514226 to 388514126 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   388514226  CCTCCGAAGAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  388514167
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||| |||  |||||||||||||||||
Subject   388514166  TGAGGTGCTCATCCGGATAAACTAGGACACAATCGCAGTAG  388514126

Range 15: 430450229 to 430450329 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   430450229  CCTCCGAACAGCTGACCGGCTCACGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  430450288
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||| |||| ||||||||||| |||||
Subject   430450289  TGAGGTGCTCATCCGGATAAACCAGGACACAATCGTAGTAG  430450329

Range 16: 465414610 to 465414710 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Subject   465414610  CCTCCGAAGAGCTGACCGGCTCTCTCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  465414669
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||| |||| |||||||||||||||||
Subject   465414670  TGAGGTGCTCATCCGGATAAACCAGGACACAATCGCAGTAG  465414710

Range 17: 142305586 to 142305485 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Subject   142305586  CCTCACGAACAGCTGACCGGCTCTCGCCGCATCATGACAGCCAGTTTTCGGCTTTCTCTA  142305527
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||||||||||||||||||||
Subject   142305526  CTGAGGTGCTCGTCCGGAAGAACCGGGACACAATCGCAGTAG  142305485

Range 18: 302131005 to 302131106 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Subject   302131005  CCTCTCGAACAGCTGACCAGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  302131064
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     |||||||||||||||||| ||||||||||||| |||||||||
Subject   302131065  CTGAGGTGCTCATCCGGAAGAACCGGGACACAGTCGCAGTAG  302131106

Range 19: 345183933 to 345183832 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Subject   345183933  CCTCTCGAACAGCTGACCAGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  345183874
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||||||||||||||||||||
Subject   345183873  CTGAGGTGCTCGTCCGGAAGAACCGGGACACAATCGCAGTAG  345183832

Range 20: 366366711 to 366366610 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Subject   366366711  CCTCTCGAACAGCTGACCGGCTCTCGCTGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  366366652
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||||||||||||||||||||
Subject   366366651  CTGAGGTGCTCGTCCGGAAGAACCGGGACACAATCGCAGTAG  366366610

Range 21: 377724760 to 377724659 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   377724760  CCTCACGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTATCTA  377724701
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||||||||||||||||||||
Subject   377724700  CTGAGGTGCTCGTCCGGAAGAACCGGGACACAATCGCAGTAG  377724659

Range 22: 429012971 to 429013072 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   429012971  CCTCTCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  429013030
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||| ||||||||||||||||
Subject   429013031  CTGAGGTGCTCCTCCGGAAGAACCGAGACACAATCGCAGTAG  429013072

Range 23: 441644124 to 441644225 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Subject   441644124  CCTCTCGAACAGCTGACCAGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  441644183
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||||||||||||||||||||
Subject   441644184  CTGAGGTGCTCGTCCGGAAGAACCGGGACACAATCGCAGTAG  441644225

Range 24: 444692630 to 444692529 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Subject   444692630  CCTCTCGAACAGCTGACCAGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  444692571
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     ||||||||||| |||||| |||||||||||||||||||||||
Subject   444692570  CTGAGGTGCTCGTCCGGAAGAACCGGGACACAATCGCAGTAG  444692529

Range 25: 494295534 to 494295433 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/-1 
Query             1  CCTC-CGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  60
                     |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Subject   494295534  CCTCTCGAACAGCTGACCGGCTCGCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTA  494295475
Query            61  CTGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  102
                     |||||||||||||||||||||||| ||||||||| |||||||
Subject   494295474  CTGAGGTGCTCATCCGGATGAACCAGGACACAATTGCAGTAG  494295433

Range 26: 175175616 to 175175516 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| 
Subject   175175616  CCTCCGAACAGCTGACCGGCTCACGCCGCATCATGACAGTCAGTTTTTGGCTTTCTCTAT  175175557
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     |||||||||||||||||| |||| |||||||||||||||||
Subject   175175556  TGAGGTGCTCATCCGGATAAACCAGGACACAATCGCAGTAG  175175516

Range 27: 192112975 to 192113075 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Subject   192112975  CCTCCGAACAGCTGACCGGCTCACGCCGCATCATGACAGTCAGTTTTCGGCTTTCCCTAC  192113034
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     ||||||||||||| |||| |||| |||||||||||||||||
Subject   192113035  TGAGGTGCTCATCTGGATAAACCAGGACACAATCGCAGTAG  192113075

Range 28: 227220043 to 227220143 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||
Subject   227220043  CCTCCGAAGAGCTGACCGGCTCTCGCCGCATCATCACAGTCAGTTTTCGGCTTTCTCAAC  227220102
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     ||||||||||||||||||||||| || ||||||||||||||
Subject   227220103  TGAGGTGCTCATCCGGATGAACCAGGGCACAATCGCAGTAG  227220143

Range 29: 237989507 to 237989407 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Subject   237989507  CCTCCGAACAGCTGACCGGCTCACGTCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  237989448
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     ||||||||||||| |||| |||| |||||||||||||||||
Subject   237989447  TGAGGTGCTCATCTGGATAAACCAGGACACAATCGCAGTAG  237989407

Range 30: 239105195 to 239105095 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  CCTCCGAACAGCTGACCGGCTCTCGCCGCATCATGACAGTCAGTTTTCGGCTTTCTCTAC  60
                     |||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||
Subject   239105195  CCTCCGAAGAGCTGACCGGCTCACGCCGCATCATAACAGTCAGTTTTCGGCTTTCTCTAC  239105136
Query            61  TGAGGTGCTCATCCGGATGAACCGGGACACAATCGCAGTAG  101
                     | ||||||||||||||||||||| |||||||||||||||||
Subject   239105135  TAAGGTGCTCATCCGGATGAACCAGGACACAATCGCAGTAG  239105095

Nucleotide Sequence (101 letters)

Query number:39
Query ID:Query_39
Definition line:zxx-039
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5075.4 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18855796 to 18855896 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18855796  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTACATGG  18855855
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18855856  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  18855896

Range 2: 171252074 to 171252174 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   171252074  AGGCTTGCAGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  171252133
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   171252134  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  171252174

Range 3: 25512559 to 25512459 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject    25512559  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  25512500
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject    25512499  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  25512459

Range 4: 64892932 to 64892832 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject    64892932  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  64892873
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject    64892872  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  64892832

Range 5: 64898352 to 64898252 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject    64898352  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  64898293
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject    64898292  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  64898252

Range 6: 104514099 to 104513999 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   104514099  AGGCTTGCCGTGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  104514040
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   104514039  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  104513999

Range 7: 117222478 to 117222578 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||
Subject   117222478  AGGCTTGCGGCGGCGGAACTCCCGATCTCTTCTGTTCCCCGATGTTTTTAGGGTATATGG  117222537
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   117222538  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  117222578

Range 8: 167527448 to 167527348 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||
Subject   167527448  AGGCTTGCGGCGGCGGAACTCCCGATCTATTGTGTTCCCCGATGTTTTTAGGGTATATGG  167527389
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   167527388  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  167527348

Range 9: 255889836 to 255889936 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   255889836  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  255889895
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   255889896  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACAAGG  255889936

Range 10: 306514338 to 306514438 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   306514338  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  306514397
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     ||||||||||||||||||||||||||||||||||| |||||
Subject   306514398  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCGCGAGG  306514438

Range 11: 306545858 to 306545958 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   306545858  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  306545917
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject   306545918  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  306545958

Range 12: 324865492 to 324865392 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Subject   324865492  AGGCTTGCAGCAGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  324865433
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     ||||||||||||||||||||||||| |||||||||||||||
Subject   324865432  ACATATATAGGCGAAAGAAGTCGGTAAGGGGAGCCACGAGG  324865392

Range 13: 336879493 to 336879593 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||
Subject   336879493  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCTCGATGTTTTTAGGGTATATGG  336879552
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   336879553  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  336879593

Range 14: 338546252 to 338546352 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   338546252  AGGCTTGCGGTGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  338546311
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   338546312  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  338546352

Range 15: 342486052 to 342485952 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||
Subject   342486052  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCTCCGATGTTTTTAGGGTATATGG  342485993
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   342485992  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  342485952

Range 16: 352092455 to 352092355 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||
Subject   352092455  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGCTCCCCGATGTTTTTAGGGTATATGG  352092396
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   352092395  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  352092355

Range 17: 366166974 to 366166874 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||
Subject   366166974  AGGCTTGCGGCGGCGGAACTCCCGATCTATTTTGTTCCCCGATGTTTTTAGGGTATATGG  366166915
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   366166914  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  366166874

Range 18: 369757677 to 369757577 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||
Subject   369757677  AGGCTTGCAGCGGCGGAACTCCCGATCTATTCTGTTCTCTGATGTTTTTAGGGTATATGG  369757618
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   369757617  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  369757577

Range 19: 476004976 to 476005076 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   476004976  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  476005035
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject   476005036  ACATATATAGGCGAAAGAAGTCGGTCAAGGGAGCCACGAGG  476005076

Range 20: 478341003 to 478340903 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   478341003  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  478340944
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject   478340943  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  478340903

Range 21: 143917670 to 143917571 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 97/100(97%) 0/100(0%) +1/-1 
Query             2  GGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGGA  61
                     ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||
Subject   143917670  GGCTTGCGGCGGCGGAACTCTCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGGA  143917611
Query            62  CATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   143917610  CATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  143917571

Range 22: 422006380 to 422006479 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 97/100(97%) 0/100(0%) +1/+1 
Query             2  GGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGGA  61
                     ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Subject   422006380  GGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGGA  422006439
Query            62  CATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                      |||||||||||||||||||||||||||||||||||||||
Subject   422006440  TATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  422006479

Range 23: 836538 to 836438 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Subject      836538  AGGCTTGCAGCGGCGGAACTCCTGATCTATTCTGTTCCCCGAAGTTTTTAGGGTATATGG  836479
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | ||||||||||||||||||||||||||||||||||| |||
Subject      836478  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACAAGG  836438

Range 24: 9808215 to 9808315 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||
Subject     9808215  AGGCTTGCGGCGGCGGAACTCCCGATCTATTGTGTTCCCCGATGTTTTTAGGGTATATGG  9808274
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject     9808275  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  9808315

Range 25: 18906087 to 18905987 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Subject    18906087  AGGCTTGCGGCGGCGGAACTCCAGATCTATTCTGTTCCTCGATGTTTTTAGGGTATATGG  18906028
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | ||||||||||||||||||||| |||||||||||||||||
Subject    18906027  AGATATATAGGCGAAAGAAGTCGATCAGGGGAGCCACGAGG  18905987

Range 26: 22869957 to 22870057 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||
Subject    22869957  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCCCGAAGTTTTTAGGGTATATGG  22870016
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject    22870017  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  22870057

Range 27: 35954303 to 35954203 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||
Subject    35954303  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTCCGCGATGTTTTTAGGGTATATGG  35954244
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     ||||||||||||||||||||||||||| |||||||||||||
Subject    35954243  ACATATATAGGCGAAAGAAGTCGGTCAAGGGAGCCACGAGG  35954203

Range 28: 62033254 to 62033154 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||
Subject    62033254  AGGCTTGCGGCGGCGGAACTCCCGATTTATTCTGCTCCCCGATGTTTTTAGGGTATATGG  62033195
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    62033194  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  62033154

Range 29: 64903776 to 64903676 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||
Subject    64903776  AGGCTTGCGGCGGCGGAACTACCGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  64903717
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject    64903716  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  64903676

Range 30: 73857916 to 73857816 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AGGCTTGCAGCGGCGGAACTCCAGATCTATTCTGTTCCCCGATGTTTTTAGGGTATATGG  60
                     |||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||
Subject    73857916  AGGCTTGCGGCGGCGGAACTCCCGATCTATTCTGTTTCCCGATGTTTTTAGGGTATATGG  73857857
Query            61  ACATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject    73857856  ATATATATAGGCGAAAGAAGTCGGTCAGGGGAGCCACGAGG  73857816

Nucleotide Sequence (101 letters)

Query number:40
Query ID:Query_40
Definition line:zxx-040
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
174.4 4587.6 115% 1.164e-42 98% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18857064 to 18857164 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18857064  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCCCGAC  18857123
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     ||||||| |||||||||||||||||||||||||||||||||
Subject    18857124  TTGTGGGAGAATAATAGTCTCCATCATCCTTTCCTCACTGG  18857164

Range 2: 155704906 to 155704806 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject   155704906  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCGGAGTCTCATCCCGAC  155704847
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   155704846  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  155704806

Range 3: 475414829 to 475414729 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject   475414829  TTTATTTGAGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCGGAGTCTCATCCCGAC  475414770
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   475414769  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  475414729

Range 4: 212970326 to 212970428 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 97/103(94%) 2/103(2%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTT--CGTCCAGAGTCTCATCTCG  60
                     ||| |||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||
Subject   212970326  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTTTCGTCCGGAGTCTCATCCCG  212970385
Query            61  ACTTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  103
                     |||||||||||||| ||||||||||||||||||||||||||||
Subject   212970386  ACTTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  212970428

Range 5: 265169478 to 265169576 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||
Subject   265169478  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTTTCGTCCGGAGTCTCATCCCGAC  265169537
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACT  99
                     |||||||||||| ||||||||||||||||||||||||||
Subject   265169538  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACT  265169576

Range 6: 395281995 to 395282094 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 96/101(95%) 1/101(1%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject   395281995  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCGGAGTCTCATCCCGAC  395282054
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| |||||||||||||| |||||||||||||
Subject   395282055  TTGTGGGGGAATCATAGTCTCCATCAT-CTTTCCTCACTGG  395282095

Range 7: 191092359 to 191092259 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| |||||||||||||||||||||||||||||||||||||||  |||||||||| ||||
Subject   191092359  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCAGGAGTCTCATCCCGAC  191092300
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| |||| |||||||||||||||||||||||
Subject   191092299  TTGTGGGGGAATCATAGCCTCCATCATCCTTTCCTCACTGG  191092259

Range 8: 62060057 to 62059960 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
155.5 bits(171) 0.0 93/98(95%) 0/98(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||
Subject    62060057  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTTTCGTCCGGAGTCTCATCCCGAC  62059998
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCAC  98
                     |||||||||||| |||||||||||||||||||||||||
Subject    62059997  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCAC  62059960

Range 9: 399879001 to 399879102 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 96/102(94%) 1/102(1%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTT-CGTCCAGAGTCTCATCTCGA  60
                     ||| ||||||||||||||||||||||||||||||||||| ||||  |||||||||| |||
Subject   399879001  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTTCGTCTGGAGTCTCATCCCGA  399879060
Query            61  CTTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  102
                     ||||||||||||| ||||||||||||||||||||||||||||
Subject   399879061  CTTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  399879102

Range 10: 441042884 to 441042785 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 94/100(94%) 0/100(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||
Subject   441042884  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTTTCGTCCGGAGTCTCATCCCGAC  441042825
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTG  100
                     |||||||||||| ||||||| |||||||||||||||||||
Subject   441042824  TTGTGGGGGAATCATAGTCTTCATCATCCTTTCCTCACTG  441042785

Range 11: 324399148 to 324399249 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 97/103(94%) 3/103(3%) +1/+1 
Query             1  TTTTT--TTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCG  60
                     |||||  ||||||||||||||||||||| |||||||| |||||||| |||||||||||||
Subject   324399148  TTTTTAGTTGGGCTTCTTTGGCCTCTTT-ATTTATTTTTTTCGTCCGGAGTCTCATCTCG  324399207
Query            61  ACTTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  103
                     |||||||||||||| ||||||||||||||||||||||||||||
Subject   324399208  ACTTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  324399250

Range 12: 58003765 to 58003666 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||
Subject    58003765  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTT-TTTCGTCCGGAGTCTCATCCCGAC  58003706
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     | |||||||||| |||||||||||||||||| |||||||||
Subject    58003705  TAGTGGGGGAATCATAGTCTCCATCATCCTTCCCTCACTGG  58003665

Range 13: 61225209 to 61225107 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 96/103(93%) 2/103(2%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTT--CGTCCAGAGTCTCATCTCG  60
                     ||| ||||||||| |||||||||||||||||||||||||  ||||| |||||||||| ||
Subject    61225209  TTTATTTGGGCTTGTTTGGCCTCTTTTATTTATTTATTTTTCGTCCGGAGTCTCATCCCG  61225150
Query            61  ACTTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  103
                     |||||||||||||| ||||||||||||||||||||||||||||
Subject    61225149  ACTTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  61225107

Range 14: 229972778 to 229972880 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 96/103(93%) 2/103(2%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTC--GTCCAGAGTCTCATCTCG  60
                     ||| |||||||||||||||||||||||||||||||||||   |||| |||||||||| ||
Subject   229972778  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTTTTGTCCGGAGTCTCATCCCG  229972837
Query            61  ACTTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  103
                     |||||||||||||| ||||||||||||||||||||||||||||
Subject   229972838  ACTTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  229972880

Range 15: 279631696 to 279631598 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| |||||||||||||||||||||||||||||||||||||||| |||||| | | ||||
Subject   279631696  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCGGAGTCTTAGCCCGAC  279631637
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACT  99
                     |||||||||||| ||||||||||||||||||||||||||
Subject   279631636  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACT  279631598

Range 16: 378739305 to 378739209 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 93/98(95%) 1/98(1%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||||
Subject   378739305  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTTT-GTCCGGAGTCTCATCCCGAC  378739246
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCAC  98
                     ||||||||||||||||||||||||||||||||||||||
Subject   378739245  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCAC  378739208

Range 17: 497185903 to 497186003 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| || ||||| |||||||||| ||||
Subject   497185903  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTTCCGTCCGGAGTCTCATCCCGAC  497185962
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| || |||||||||||||||||||||||||
Subject   497185963  TTGTGGGGGAATCATGGTCTCCATCATCCTTTCCTCACTGG  497186003

Range 18: 478271197 to 478271094 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.0 bits(166) 0.0 96/104(92%) 3/104(3%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTA---TTTCGTCCAGAGTCTCATCTC  60
                     ||||||||||||||||||||||||||||||| |||    |||||||| |||||||||| |
Subject   478271197  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTTTTTTATTTTTCGTCCGGAGTCTCATCCC  478271138
Query            61  GACTTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  104
                     ||||||||||||||| ||||||||||||||||||||||||||||
Subject   478271137  GACTTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  478271094

Range 19: 203373125 to 203373226 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 95/102(93%) 1/102(1%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTT-CGTCCAGAGTCTCATCTCGA  60
                     ||| ||||||||||||||||||||||||||||||||||| ||||  |||||||||| | |
Subject   203373125  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTTCGTCGGGAGTCTCATCCCAA  203373184
Query            61  CTTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  102
                     ||||||||||||| ||||||||||||||||||||||||||||
Subject   203373185  CTTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  203373226

Range 20: 317803681 to 317803584 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
149.2 bits(164) 0.0 93/99(94%) 1/99(1%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| || ||||| |||||||||| ||||
Subject   317803681  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTT-TTCCGTCCGGAGTCTCATCCCGAC  317803622
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACT  99
                     |||||||||||| ||||||||||||||||||||||||||
Subject   317803621  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACT  317803583

Range 21: 433671510 to 433671410 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
149.2 bits(164) 0.0 94/101(93%) 2/101(2%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTC--GTCCAGAGTCTCATCTCG  60
                     ||| ||||||||||||||||||||||||||||||| ||||  |||| |||||||||| ||
Subject   433671510  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTTTCTCGTCCGGAGTCTCATCCCG  433671451
Query            61  ACTTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACT  101
                     |||||||||||||| ||||||||||||||||||||||||||
Subject   433671450  ACTTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACT  433671410

Range 22: 142113017 to 142113113 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 92/98(94%) 1/98(1%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||
Subject   142113017  TTTATTTGGGCTTCTTTGGCCTCTTTT-TTTATTTTTTTCGTCCGGAGTCTCATCCCGAC  142113076
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCAC  98
                     |||||||||||| |||||||||||||||||||||||||
Subject   142113077  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCAC  142113114

Range 23: 171152522 to 171152622 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |   |||| |||||||||| ||||
Subject   171152522  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTAAAGTCCGGAGTCTCATCCCGAC  171152581
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   171152582  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  171152622

Range 24: 264895521 to 264895621 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |   |||| |||||||||| ||||
Subject   264895521  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTAAAGTCCGGAGTCTCATCCCGAC  264895580
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   264895581  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  264895621

Range 25: 270340879 to 270340779 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |   |||| |||||||||| ||||
Subject   270340879  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTAAAGTCCGGAGTCTCATCCCGAC  270340820
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   270340819  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  270340779

Range 26: 272167158 to 272167058 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |   |||| |||||||||| ||||
Subject   272167158  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTAAAGTCCGGAGTCTCATCCCGAC  272167099
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   272167098  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  272167058

Range 27: 406227370 to 406227270 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |   |||| |||||||||| ||||
Subject   406227370  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTTTTAAAGTCCGGAGTCTCATCCCGAC  406227311
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   406227310  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  406227270

Range 28: 422399356 to 422399256 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||||||||||||||||||||||||||||||| ||| |   |||| |||||||||| ||||
Subject   422399356  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTTTTTGTAAAGTCCGGAGTCTCATCCCGAC  422399297
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   422399296  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  422399256

Range 29: 424404167 to 424404067 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||||||||||||||||||||||||||||||| ||| |   |||| |||||||||| ||||
Subject   424404167  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTTTTTGTAAAGTCCGGAGTCTCATCCCGAC  424404108
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCACTGG  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   424404107  TTGTGGGGGAATCATAGTCTCCATCATCCTTTCCTCACTGG  424404067

Range 30: 463690250 to 463690154 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 92/98(94%) 1/98(1%) +1/-1 
Query             1  TTTTTTTGGGCTTCTTTGGCCTCTTTTATTTATTTATTTCGTCCAGAGTCTCATCTCGAC  60
                     ||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||
Subject   463690250  TTTATTTGGGCTTCTTTGGCCTCTTTTATTTATTT-TTTCGTCCGGAGTCTCATCCCGAC  463690191
Query            61  TTGTGGGGGAATAATAGTCTCCATCATCCTTTCCTCAC  98
                     |||||||||||  |||||||||||||||||||||||||
Subject   463690190  TTGTGGGGGAACCATAGTCTCCATCATCCTTTCCTCAC  463690153

Nucleotide Sequence (101 letters)

Query number:41
Query ID:Query_41
Definition line:zxx-041
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5041.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18870100 to 18870200 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18870100  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  18870159
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18870160  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  18870200

Range 2: 76432400 to 76432498 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
170.8 bits(188) 0.0 97/99(98%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    76432400  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  76432459
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject    76432460  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  76432498

Range 3: 428950049 to 428950147 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
170.8 bits(188) 0.0 97/99(98%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   428950049  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  428950108
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   428950109  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  428950147

Range 4: 18855117 to 18855217 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Subject    18855117  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGGATAACACCTTAAGAC  18855176
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject    18855177  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  18855217

Range 5: 66299788 to 66299888 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    66299788  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  66299847
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject    66299848  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  66299888

Range 6: 68499738 to 68499638 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    68499738  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  68499679
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject    68499678  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  68499638

Range 7: 92836965 to 92837065 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    92836965  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  92837024
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject    92837025  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  92837065

Range 8: 92843060 to 92843160 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    92843060  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  92843119
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject    92843120  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  92843160

Range 9: 426589516 to 426589616 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   426589516  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  426589575
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject   426589576  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  426589616

Range 10: 492506635 to 492506535 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   492506635  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  492506576
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject   492506575  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  492506535

Range 11: 502893273 to 502893373 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Subject   502893273  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCATACTAGAATAACACCTTAAGAC  502893332
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject   502893333  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  502893373

Range 12: 494265162 to 494265261 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 97/100(97%) 0/100(0%) +1/+1 
Query             2  GAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGACA  61
                     |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Subject   494265162  GAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCATACTAGAATAACACCTTAAGACA  494265221
Query            62  CAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCATT  101
                     |||||||||||||||||||||||||||||| |||||||||
Subject   494265222  CAAATCAACCAAAACCCTAATGTCACCTAGATACTCCATT  494265261

Range 13: 76535657 to 76535559 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Subject    76535657  CGAAGCTATTCTTTCCATTCGATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  76535598
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject    76535597  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  76535559

Range 14: 93937151 to 93937249 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    93937151  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  93937210
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject    93937211  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  93937249

Range 15: 109427999 to 109428097 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   109427999  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  109428058
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   109428059  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  109428097

Range 16: 124791358 to 124791260 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Subject   124791358  CGAAGCTATTCTTTCCATTCGATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  124791299
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   124791298  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  124791260

Range 17: 137979505 to 137979603 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   137979505  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  137979564
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   137979565  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  137979603

Range 18: 149831250 to 149831348 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Subject   149831250  CGAAGCTATTCTTTCCATTCGATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  149831309
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   149831310  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  149831348

Range 19: 176878918 to 176878820 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   176878918  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  176878859
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   176878858  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  176878820

Range 20: 191475577 to 191475479 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   191475577  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  191475518
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   191475517  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  191475479

Range 21: 298937412 to 298937314 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   298937412  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  298937353
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   298937352  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  298937314

Range 22: 305537104 to 305537006 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   305537104  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  305537045
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   305537044  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  305537006

Range 23: 323153212 to 323153114 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   323153212  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  323153153
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   323153152  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  323153114

Range 24: 324820978 to 324820880 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   324820978  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  324820919
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   324820918  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  324820880

Range 25: 340337839 to 340337741 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   340337839  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  340337780
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   340337779  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  340337741

Range 26: 341533219 to 341533121 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   341533219  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  341533160
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   341533159  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  341533121

Range 27: 394485566 to 394485664 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   394485566  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  394485625
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   394485626  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  394485664

Range 28: 401279500 to 401279598 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   401279500  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  401279559
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   401279560  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  401279598

Range 29: 417668775 to 417668677 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/-1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   417668775  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  417668716
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   417668715  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  417668677

Range 30: 419476779 to 419476877 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             1  CGAAGCTATTCTTTCCATTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTTAGAC  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   419476779  CGAAGCTATTCTTTCCGTTCAATCTATCATAGAGTTCGTACTAGAATAACACCTTAAGAC  419476838
Query            61  ACAAATCAACCAAAACCCTAATGTCACCTAGGTACTCCA  99
                     ||||||||||||||||||||||||||||||| |||||||
Subject   419476839  ACAAATCAACCAAAACCCTAATGTCACCTAGATACTCCA  419476877

Nucleotide Sequence (101 letters)

Query number:42
Query ID:Query_42
Definition line:zxx-042
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 178.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 1

Range 1: 18909376 to 18909476 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CCTATTCGTAAGAACATCTATAGCCGGACTAGCATATCCGCCTCCTAAACATCCGTGGAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18909376  CCTATTCGTAAGAACATCTATAGCCGGACTAGCATATCCGCCTCCTAAACATCCGCGGAC  18909435
Query            61  GCACACGGGCACCACTCCGGAGAACGTCAGACGGCCCCTCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18909436  GCACACGGGCACCACTCCGGAGAACGTCAGACGGCCCCTCA  18909476

Nucleotide Sequence (101 letters)

Query number:43
Query ID:Query_43
Definition line:zxx-043
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4653.4 116% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18922530 to 18922630 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18922530  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTTCAAA  18922589
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18922590  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  18922630

Range 2: 495899065 to 495899163 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
162.7 bits(179) 0.0 97/101(96%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Subject   495899065  CTTAAGTTA--GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  495899124
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   495899125  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  495899165

Range 3: 495889117 to 495889215 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
158.2 bits(174) 0.0 96/101(95%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||
Subject   495889117  CTTAAGTTAAA--CCAAATGGTCCCTCCGGAATGTGGTGATTTTTTCGACCACCTCCAAA  495889176
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   495889177  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  495889217

Range 4: 495893597 to 495893695 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
158.2 bits(174) 0.0 96/101(95%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||
Subject   495893597  CTTAAGTTA--GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTTGACCACCTCCAAA  495893656
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   495893657  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  495893697

Range 5: 495898101 to 495898199 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
158.2 bits(174) 0.0 96/101(95%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Subject   495898101  CTTAAGTTA--GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  495898160
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     |||||||||||||| |||||||  |||||||||||||||||
Subject   495898161  TCACCTCAATTTTGACACACATGATCTCTTGCACAAACAAA  495898201

Range 6: 495903874 to 495903972 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
158.2 bits(174) 0.0 96/101(95%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     ||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||
Subject   495903874  CTTAACTTA--GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  495903933
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   495903934  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  495903974

Range 7: 495908045 to 495908143 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
158.2 bits(174) 0.0 96/101(95%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     ||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Subject   495908045  CTTGAGTTA--GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  495908104
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   495908105  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  495908145

Range 8: 120302407 to 120302308 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 94/100(94%) 0/100(0%) +1/-1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     ||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||
Subject   120302407  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGCGGGCATTTTTTCGACCACCTCCAAA  120302348
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  100
                     ||||||||||||||||||||||  ||||||||||||||||
Subject   120302347  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  120302308

Range 9: 18923486 to 18923584 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 95/101(94%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||
Subject    18923486  CTTAAGTTA--GACCAAATGGTCCCTCCGGAATGCGGTGATTTTTTCGACCACCTCCAAA  18923545
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||| ||||||||||||| |||||||||||||||||
Subject    18923546  TCACCTCAAATTTGGCACACATTATCTCTTGCACAAACAAA  18923586

Range 10: 115125694 to 115125596 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 95/101(94%) 2/101(2%) +1/-1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||
Subject   115125694  CTTAAGTTA--GACCAAATGGTCCCTCCGGAATGCGGTGATTTTTTCGACCACCTCCAAA  115125635
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   115125634  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  115125594

Range 11: 481267921 to 481268019 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 95/101(94%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||
Subject   481267921  CTTAAGTTA--GACCAAATGATCCCTCCGGAATGCCGTGATTTTTTCGACCACCTCCAAA  481267980
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   481267981  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  481268021

Range 12: 483069773 to 483069675 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 95/101(94%) 2/101(2%) +1/-1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||
Subject   483069773  CTTAAGTTA--GACCAAATGGTCCCTCCGGAATGCGGTGATTTTTTCGACCACCTCCAAA  483069714
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   483069713  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  483069673

Range 13: 485955981 to 485955883 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 95/101(94%) 2/101(2%) +1/-1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||
Subject   485955981  CTTAAGTTA--GACCAAATGGTCCCTCCGGAATGCGGTGATTTTTTCGACCACCTCCAAA  485955922
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   485955921  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  485955881

Range 14: 495887838 to 495887936 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 95/101(94%) 2/101(2%) +1/+1 
Query             1  CTTAAGTTAAAGACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAAA  60
                     |||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||||
Subject   495887838  CTTAAGTTA--GACCAAATGGTCCCTCCGGAATGCCGTGATTTTTTTGACCACCTCCAAA  495887897
Query            61  TCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAAA  101
                     ||||||||||||||||||||||  |||||||||||||||||
Subject   495887898  TCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAAA  495887938

Range 15: 66839370 to 66839270 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66839370  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66839311
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66839310  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66839270

Range 16: 66843560 to 66843460 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66843560  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66843501
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66843500  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66843460

Range 17: 66844524 to 66844424 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66844524  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66844465
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66844464  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66844424

Range 18: 66846784 to 66846684 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66846784  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66846725
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66846724  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66846684

Range 19: 66849026 to 66848926 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66849026  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66848967
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66848966  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66848926

Range 20: 66852265 to 66852165 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66852265  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66852206
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66852205  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66852165

Range 21: 66853869 to 66853769 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66853869  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66853810
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66853809  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66853769

Range 22: 66855159 to 66855059 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66855159  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66855100
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66855099  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66855059

Range 23: 66860948 to 66860848 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66860948  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66860889
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66860888  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66860848

Range 24: 66861907 to 66861807 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66861907  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66861848
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66861847  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66861807

Range 25: 66864489 to 66864389 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66864489  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66864430
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66864429  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66864389

Range 26: 66867721 to 66867621 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66867721  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66867662
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66867661  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66867621

Range 27: 66871283 to 66871183 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66871283  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66871224
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66871223  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66871183

Range 28: 66874526 to 66874426 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66874526  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66874467
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66874466  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66874426

Range 29: 66875828 to 66875728 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66875828  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66875769
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66875768  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66875728

Range 30: 66879060 to 66878960 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  CTTAAGTTAAA-GACCAAATGGTCCCTCCGGAATGTCGTGATTTTTTCGACCACCTCCAA  60
                     ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||
Subject    66879060  CTTAAGTTAAAAGACCAAATGGTCCCTCCGGAATGTGGGCATTTTTTCGACCACCTCCAA  66879001
Query            61  ATCACCTCAATTTTGGCACACATTCTCTCTTGCACAAACAA  101
                     |||||||||||||||||||||||  ||||||||||||||||
Subject    66879000  ATCACCTCAATTTTGGCACACATGATCTCTTGCACAAACAA  66878960

Nucleotide Sequence (101 letters)

Query number:44
Query ID:Query_44
Definition line:zxx-044
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 793.6 104% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 5

Range 1: 18926376 to 18926476 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TAATGCACAATATCGGTCATGATCGTGACTGAATAGCATCGTTACAAGGTACTCACAGGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18926376  TAATGCACAATATCGGTCATGATCGTGACTGAATAGCATCGTTACAAGGTACTCAGAGGG  18926435
Query            61  GGATACTGAAGACATGCTCTTGCGGTTGACTGTTGTGGCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18926436  GGATACTGAAGACATGCTCTTGCGGTTGACTGTTGTGGCAT  18926476

Range 2: 495921983 to 495922084 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  TAATGCACAATATCGGTCATGATCGTGACTGAATAGCATCGTTACAAGGTACTCACAGGG  60
                     |||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Subject   495921983  TAATACACAATATCGGTCGTGATCGTGACTGAATAGCATCGTTGCAAGGTACTCACAGGG  495922042
Query            61  GGA-TACTGAAGACATGCTCTTGCGGTTGACTGTTGTGGCAT  102
                     ||| ||||||||||||||||||||||||||||||||||||||
Subject   495922043  GGAGTACTGAAGACATGCTCTTGCGGTTGACTGTTGTGGCAT  495922084

Range 3: 115122331 to 115122230 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 96/102(94%) 1/102(1%) +1/-1 
Query             1  TAATGCACAATATCGGTCATGATCGTGACTGAATAGCATCGTTACAAGGTACTCACAGGG  60
                     |||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Subject   115122331  TAATACACAATATCGGTCGTGATCGTGACTGAATAGCATCGTTGCAAGGTACTCACAGGG  115122272
Query            61  GGA-TACTGAAGACATGCTCTTGCGGTTGACTGTTGTGGCAT  102
                     ||| ||||||| ||||||||||||||||||||| ||||||||
Subject   115122271  GGAGTACTGAAAACATGCTCTTGCGGTTGACTGCTGTGGCAT  115122230

Range 4: 481294103 to 481294204 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 95/102(93%) 1/102(1%) +1/+1 
Query             1  TAATGCACAATATCGGTCATGATCGTGACTGAATAGCATCGTTACAAGGTACTCACAGGG  60
                     |||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||
Subject   481294103  TAATACACAATATCGGTCGTGATCGTGACTAAATAGCATCGTTGCAAGGTACTCACAGGG  481294162
Query            61  GGA-TACTGAAGACATGCTCTTGCGGTTGACTGTTGTGGCAT  102
                     ||| ||||||||||||||||||||||||||||| | ||||||
Subject   481294163  GGAGTACTGAAGACATGCTCTTGCGGTTGACTGCTATGGCAT  481294204

Range 5: 42734727 to 42734826 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
146.5 bits(161) 0.0 93/100(93%) 1/100(1%) +1/+1 
Query             3  ATGCACAATATCGGTCATGATCGTGACTGAATAGCATCGTTACAAGGTACTCACAGGGGG  62
                     || |||||||| |||||||||| |||||||||||||||||| |||||||||||| |||||
Subject    42734727  ATACACAATATTGGTCATGATCATGACTGAATAGCATCGTTGCAAGGTACTCACGGGGGG  42734786
Query            63  A-TACTGAAGACATGCTCTTGCGGTTGACTGTTGTGGCAT  102
                     | ||||||||||||||||||||||||||||| ||||||||
Subject    42734787  AGTACTGAAGACATGCTCTTGCGGTTGACTGCTGTGGCAT  42734826

Nucleotide Sequence (101 letters)

Query number:45
Query ID:Query_45
Definition line:zxx-045
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 993.3 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 6

Range 1: 18932139 to 18932239 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TTTGTGAAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTACGGTA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18932139  TTTGTGAAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTATGGTA  18932198
Query            61  ATTTTTTCGGCCGAAAATACTCGAAAACTGGCCACACGTGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18932199  ATTTTTTCGGCCGAAAATACTCGAAAACTGGCCACACGTGA  18932239

Range 2: 483067285 to 483067191 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 94/95(99%) 0/95(0%) +1/-1 
Query             7  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTACGGTAATTTTT  66
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   483067285  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTACGGTAATTTTT  483067226
Query            67  TCGGCCGAAAATACTCGAAAACTGGCCACACGTGA  101
                     |||||||||| ||||||||||||||||||||||||
Subject   483067225  TCGGCCGAAAGTACTCGAAAACTGGCCACACGTGA  483067191

Range 3: 481299977 to 481300071 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 93/95(98%) 0/95(0%) +1/+1 
Query             7  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTACGGTAATTTTT  66
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Subject   481299977  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTACGGTAATTTTC  481300036
Query            67  TCGGCCGAAAATACTCGAAAACTGGCCACACGTGA  101
                     |||||||||||||||| ||||||||||||||||||
Subject   481300037  TCGGCCGAAAATACTCAAAAACTGGCCACACGTGA  481300071

Range 4: 495940943 to 495941037 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 93/95(98%) 0/95(0%) +1/+1 
Query             7  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTACGGTAATTTTT  66
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Subject   495940943  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTATGGTAATTTTT  495941002
Query            67  TCGGCCGAAAATACTCGAAAACTGGCCACACGTGA  101
                     ||| |||||||||||||||||||||||||||||||
Subject   495941003  TCGACCGAAAATACTCGAAAACTGGCCACACGTGA  495941037

Range 5: 115116488 to 115116395 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.0 bits(176) 0.0 93/95(98%) 1/95(1%) +1/-1 
Query             7  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTACGGTAATTTTT  66
                     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Subject   115116488  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCGTGTACGGTAATTTTT  115116429
Query            67  TCGGCCGAAAATACTCGAAAACTGGCCACACGTGA  101
                     | |||||||||||||||||||||||||||||||||
Subject   115116428  T-GGCCGAAAATACTCGAAAACTGGCCACACGTGA  115116394

Range 6: 42740553 to 42740647 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 92/95(97%) 0/95(0%) +1/+1 
Query             7  AAGCAAGCATGCAAAAATGCTATTCAGTTTACACAAAATTTTGCATGTACGGTAATTTTT  66
                     ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Subject    42740553  AAGCAAGCATGCAAAAATGCTATTCGGTTTACACAAAATTTTGCATGTACGGTAATTTTT  42740612
Query            67  TCGGCCGAAAATACTCGAAAACTGGCCACACGTGA  101
                     |||||||||||||||| |||||||||||||| |||
Subject    42740613  TCGGCCGAAAATACTCAAAAACTGGCCACACATGA  42740647

Nucleotide Sequence (101 letters)

Query number:46
Query ID:Query_46
Definition line:zxx-046
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 798.5 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 6

Range 1: 18933474 to 18933574 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCAACGTCAC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18933474  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCAACATCAC  18933533
Query            61  ATTTGTTTTTTCTTCAGTGTGGGACGCACTATCCGCGTGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18933534  ATTTGTTTTTTCTTCAGTGTGGGACGCACTATCCGCGTGGA  18933574

Range 2: 42741889 to 42741963 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
127.5 bits(140) 0.0 73/75(97%) 0/75(0%) +1/+1 
Query             1  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCAACGTCAC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Subject    42741889  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCGACGACAC  42741948
Query            61  ATTTGTTTTTTCTTC  75
                     |||||||||||||||
Subject    42741949  ATTTGTTTTTTCTTC  42741963

Range 3: 115115202 to 115115128 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
127.5 bits(140) 0.0 73/75(97%) 0/75(0%) +1/-1 
Query             1  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCAACGTCAC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Subject   115115202  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCGACGGCAC  115115143
Query            61  ATTTGTTTTTTCTTC  75
                     |||||||||||||||
Subject   115115142  ATTTGTTTTTTCTTC  115115128

Range 4: 483065970 to 483065896 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
127.5 bits(140) 0.0 73/75(97%) 0/75(0%) +1/-1 
Query             1  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCAACGTCAC  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Subject   483065970  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCGACGGCAC  483065911
Query            61  ATTTGTTTTTTCTTC  75
                     |||||||||||||||
Subject   483065910  ATTTGTTTTTTCTTC  483065896

Range 5: 495942257 to 495942330 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
119.4 bits(131) 0.0 72/75(96%) 1/75(1%) +1/+1 
Query             1  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCAACGTCAC  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||
Subject   495942257  ATTTTCAGAACAAACAACATATTTTACCACTT-AAAAATGCATTCCTTTCTCGACGGCAC  495942316
Query            61  ATTTGTTTTTTCTTC  75
                     |||||||||||||||
Subject   495942317  ATTTGTTTTTTCTTC  495942331

Range 6: 481301310 to 481301382 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
117.6 bits(129) 0.0 71/74(96%) 1/74(1%) +1/+1 
Query             1  ATTTTCAGAACAAACAACATATTTTACCACTTAAAAAATGCATTCCTTTCTCAACGTCAC  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||
Subject   481301310  ATTTTCAGAACAAACAACATATTTTACCACTT-AAAAATGCATTCCTTTCTCGACGGCAC  481301369
Query            61  ATTTGTTTTTTCTT  74
                     ||||||||||||||
Subject   481301370  ATTTGTTTTTTCTT  481301383

Nucleotide Sequence (101 letters)

Query number:47
Query ID:Query_47
Definition line:zxx-047
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 795.8 120% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 6

Range 1: 18937289 to 18937389 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGCAGAGAGGACATGGACGCCCGAGCAAGCTTGTCGATGAAGTGCAAGCTAAAAAATTTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18937289  AGCAGAGAGGACATGGACGCCCGAGCAAGCTTGTCGATGAAGTGCAAGCTAAAAATTTTT  18937348
Query            61  TATGGAAGAGCTCATAGTGAAATTTGATAGCAAGATCATTG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18937349  TATGGAAGAGCTCATAGTGAAATTTGATAGCAAGATCATTG  18937389

Range 2: 483061843 to 483061739 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
131.1 bits(144) 0.0 92/105(88%) 4/105(4%) +1/-1 
Query             1  AGCAGAGAGGACATGGACGCCCGAGCAAGCTTGTCGATGAAGTGCAAGCTAAAA----AA  60
                     |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||    ||
Subject   483061843  AGCAGAGAGGACGTGGACGCCCGAGGAAGCTTGTCGATGAAGTCCAAGCTAAAAAAACAA  483061784
Query            61  TTTTTATGGAAGAGCTCATAGTGAAATTTGATAGCAAGATCATTG  105
                         |||||||||||||| |||||||||||||||||||| |||||
Subject   483061783  AAACTATGGAAGAGCTCAAAGTGAAATTTGATAGCAAGACCATTG  483061739

Range 3: 495946405 to 495946509 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
131.1 bits(144) 0.0 92/105(88%) 4/105(4%) +1/+1 
Query             1  AGCAGAGAGGACATGGACGCCCGAGCAAGCTTGTCGATGAAGTGCAAGCTAAAA----AA  60
                     ||| |||||||| |||||||||||| ||||||||||||||||||||||||||||    ||
Subject   495946405  AGCGGAGAGGACGTGGACGCCCGAGGAAGCTTGTCGATGAAGTGCAAGCTAAAAAAACAA  495946464
Query            61  TTTTTATGGAAGAGCTCATAGTGAAATTTGATAGCAAGATCATTG  105
                         |||||||||||||| |||||||||||||||||||| |||||
Subject   495946465  AAACTATGGAAGAGCTCAGAGTGAAATTTGATAGCAAGACCATTG  495946509

Range 4: 481305410 to 481305514 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
126.6 bits(139) 0.0 91/105(87%) 4/105(4%) +1/+1 
Query             1  AGCAGAGAGGACATGGACGCCCGAGCAAGCTTGTCGATGAAGTGCAAGCT----AAAAAA  60
                     |||||||||||| |||||||||||| ||||||||||||||||||||||||    ||| ||
Subject   481305410  AGCAGAGAGGACGTGGACGCCCGAGGAAGCTTGTCGATGAAGTGCAAGCTAAGAAAACAA  481305469
Query            61  TTTTTATGGAAGAGCTCATAGTGAAATTTGATAGCAAGATCATTG  105
                         |||| ||||||||| |||||||||||||||||||| |||||
Subject   481305470  AAACTATGAAAGAGCTCAGAGTGAAATTTGATAGCAAGACCATTG  481305514

Range 5: 115111064 to 115110964 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
123.9 bits(136) 0.0 88/101(87%) 4/101(4%) +1/-1 
Query             5  GAGAGGACATGGACGCCCGAGCAAGCTTGTCGATGAAGTGCAAGCTAAAA----AATTTT  64
                     |||||||| |||| ||||||| ||||||||||||||||||||||||||||    ||    
Subject   115111064  GAGAGGACGTGGATGCCCGAGGAAGCTTGTCGATGAAGTGCAAGCTAAAAAAACAAAAAC  115111005
Query            65  TATGGAAGAGCTCATAGTGAAATTTGATAGCAAGATCATTG  105
                     |||||||||||||| |||||||||||||||||||| |||||
Subject   115111004  TATGGAAGAGCTCAGAGTGAAATTTGATAGCAAGACCATTG  115110964

Range 6: 42746009 to 42746113 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
104.1 bits(114) 0.0 86/105(82%) 4/105(4%) +1/+1 
Query             1  AGCAGAGAGGACATGGACGCCCGAGCAAGCTTGTCGATGAAGTGCAAGCTAAAAAATTTT  60
                     ||| ||||| |||||||||||| || ||||||||||| |||   ||||||||||||    
Subject    42746009  AGCGGAGAGCACATGGACGCCCAAGGAAGCTTGTCGACGAACAACAAGCTAAAAAAACAA  42746068
Query            61  ----TATGGAAGAGCTCATAGTGAAATTTGATAGCAAGATCATTG  105
                         |||||||||||| | |||||||||||||||||||| |||||
Subject    42746069  AAACTATGGAAGAGCTTAGAGTGAAATTTGATAGCAAGACCATTG  42746113

Nucleotide Sequence (101 letters)

Query number:48
Query ID:Query_48
Definition line:zxx-048
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5367.5 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 3822148 to 3822248 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Subject     3822148  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCATCCGTTTGGCG  3822207
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     3822208  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  3822248

Range 2: 18945065 to 18945165 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18945065  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  18945124
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18945125  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  18945165

Range 3: 19285464 to 19285364 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19285464  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  19285405
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19285404  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  19285364

Range 4: 19292163 to 19292063 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19292163  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  19292104
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19292103  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  19292063

Range 5: 39466889 to 39466989 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    39466889  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  39466948
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    39466949  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  39466989

Range 6: 61909881 to 61909981 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    61909881  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  61909940
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    61909941  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  61909981

Range 7: 64589055 to 64588955 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    64589055  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  64588996
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    64588995  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  64588955

Range 8: 66549624 to 66549724 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    66549624  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  66549683
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    66549684  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  66549724

Range 9: 77601462 to 77601362 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    77601462  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  77601403
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||| ||||||||||||||||||||||||||||||||||
Subject    77601402  CTAGATTGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  77601362

Range 10: 77608253 to 77608153 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    77608253  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  77608194
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||| ||||||||||||||||||||||
Subject    77608193  CTAGATCGGATCTTCCGCCATTTGAATCGCCGCGAGTACGA  77608153

Range 11: 80970194 to 80970294 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    80970194  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  80970253
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    80970254  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  80970294

Range 12: 82866137 to 82866037 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    82866137  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  82866078
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    82866077  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  82866037

Range 13: 89945523 to 89945623 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    89945523  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  89945582
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    89945583  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  89945623

Range 14: 89952347 to 89952447 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    89952347  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  89952406
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    89952407  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  89952447

Range 15: 109215637 to 109215537 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   109215637  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  109215578
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   109215577  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  109215537

Range 16: 109222699 to 109222599 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   109222699  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  109222640
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   109222639  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  109222599

Range 17: 153727309 to 153727409 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   153727309  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  153727368
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   153727369  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  153727409

Range 18: 176913227 to 176913327 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   176913227  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  176913286
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   176913287  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  176913327

Range 19: 186414088 to 186414188 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   186414088  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  186414147
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   186414148  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  186414188

Range 20: 189917350 to 189917250 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   189917350  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  189917291
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   189917290  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  189917250

Range 21: 216843676 to 216843776 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Subject   216843676  AAGGAGGAGACGTCCCCGGGCTATACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  216843735
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   216843736  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  216843776

Range 22: 232000052 to 231999952 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   232000052  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  231999993
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   231999992  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  231999952

Range 23: 273070992 to 273071092 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   273070992  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  273071051
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   273071052  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  273071092

Range 24: 317994747 to 317994847 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   317994747  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  317994806
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||| ||||||||||||||||||||||||
Subject   317994807  CTAGATCGGATCTTCCTCGATTTGAATCGCCGCGAGTACGA  317994847

Range 25: 339784019 to 339784119 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   339784019  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  339784078
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject   339784079  CTAGATCGGATCTTCCGCGATTTGAATCGTCGCGAGTACGA  339784119

Range 26: 349173217 to 349173317 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   349173217  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  349173276
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   349173277  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  349173317

Range 27: 349181226 to 349181326 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   349181226  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  349181285
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   349181286  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  349181326

Range 28: 412612558 to 412612458 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   412612558  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  412612499
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   412612498  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  412612458

Range 29: 417177317 to 417177217 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   417177317  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  417177258
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   417177257  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  417177217

Range 30: 417179667 to 417179567 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTTGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   417179667  AAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGCCGTCCGTTCGGCG  417179608
Query            61  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   417179607  CTAGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGA  417179567

Nucleotide Sequence (101 letters)

Query number:49
Query ID:Query_49
Definition line:zxx-049
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4979.8 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18949988 to 18950088 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18949988  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATATTGAT  18950047
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18950048  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  18950088

Range 2: 19290370 to 19290272 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
175.3 bits(193) 0.0 98/99(99%) 0/99(0%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    19290370  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  19290311
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     ||||||||||| |||||||||||||||||||||||||||
Subject    19290310  GGTTCTCCATAATCACTGCCACCAAGCTATTAGAGCTTC  19290272

Range 3: 38267123 to 38267220 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 98/101(97%) 3/101(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject    38267123  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  38267182
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    38267183  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  38267223

Range 4: 119823122 to 119823219 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 98/101(97%) 3/101(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   119823122  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  119823181
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   119823182  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  119823222

Range 5: 148134109 to 148134012 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 98/101(97%) 3/101(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   148134109  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  148134050
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   148134049  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  148134009

Range 6: 160751444 to 160751541 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 98/101(97%) 3/101(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   160751444  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  160751503
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   160751504  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  160751544

Range 7: 394886123 to 394886026 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 98/101(97%) 3/101(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   394886123  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  394886064
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   394886063  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCAT  394886023

Range 8: 186416026 to 186416122 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 97/100(97%) 3/100(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   186416026  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  186416085
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCA  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject   186416086  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTCA  186416125

Range 9: 2357841 to 2357936 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject     2357841  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  2357900
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject     2357901  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  2357939

Range 10: 3817179 to 3817274 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject     3817179  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  3817238
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject     3817239  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  3817277

Range 11: 17194611 to 17194706 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject    17194611  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  17194670
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject    17194671  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  17194709

Range 12: 31262099 to 31262004 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject    31262099  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  31262040
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject    31262039  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  31262001

Range 13: 34587736 to 34587641 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject    34587736  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  34587677
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject    34587676  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  34587638

Range 14: 43663886 to 43663791 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject    43663886  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  43663827
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject    43663826  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  43663788

Range 15: 98318675 to 98318580 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject    98318675  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  98318616
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject    98318615  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  98318577

Range 16: 100730320 to 100730225 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   100730320  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  100730261
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   100730260  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  100730222

Range 17: 107756789 to 107756884 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   107756789  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  107756848
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   107756849  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  107756887

Range 18: 133047096 to 133047001 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   133047096  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  133047037
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   133047036  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  133046998

Range 19: 145029441 to 145029346 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   145029441  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  145029382
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   145029381  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  145029343

Range 20: 168404515 to 168404610 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   168404515  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  168404574
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   168404575  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  168404613

Range 21: 172719184 to 172719089 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   172719184  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  172719125
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   172719124  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  172719086

Range 22: 186724347 to 186724252 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   186724347  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  186724288
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   186724287  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  186724249

Range 23: 205455773 to 205455868 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   205455773  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  205455832
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   205455833  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  205455871

Range 24: 273056498 to 273056403 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   273056498  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  273056439
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   273056438  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  273056400

Range 25: 296454776 to 296454871 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   296454776  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  296454835
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   296454836  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  296454874

Range 26: 318132380 to 318132475 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   318132380  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  318132439
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   318132440  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  318132478

Range 27: 366408624 to 366408719 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/+1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   366408624  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  366408683
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   366408684  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  366408722

Range 28: 379186702 to 379186607 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   379186702  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  379186643
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   379186642  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  379186604

Range 29: 382974235 to 382974140 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   382974235  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  382974176
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   382974175  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  382974137

Range 30: 434204101 to 434204006 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
164.5 bits(181) 0.0 96/99(97%) 3/99(3%) +1/-1 
Query             1  TGAGTACTACAATCGCTTGAATCGACGAGTGGGAGTTAATCTTCCAGATGAGATAGTGAT  60
                     |||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||
Subject   434204101  TGAGTACTACAATCGCTTGAATCGA---GTGGGAGTTAATCTTCCAGATGAGATAGTGAT  434204042
Query            61  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   434204041  GGTTCTCCATAGTCACTGCCACCAAGCTATTAGAGCTTC  434204003

Nucleotide Sequence (101 letters)

Query number:50
Query ID:Query_50
Definition line:zxx-050
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5415.3 100% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 70256360 to 70256260 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    70256360  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  70256301
Query            61  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    70256300  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  70256260

Range 2: 19287888 to 19287789 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    19287888  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  19287829
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    19287828  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  19287789

Range 3: 34585255 to 34585156 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    34585255  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  34585196
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    34585195  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  34585156

Range 4: 43977152 to 43977251 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    43977152  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  43977211
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    43977212  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  43977251

Range 5: 65300197 to 65300098 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    65300197  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  65300138
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    65300137  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  65300098

Range 6: 77578856 to 77578955 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    77578856  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  77578915
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    77578916  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  77578955

Range 7: 85789644 to 85789743 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    85789644  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  85789703
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    85789704  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  85789743

Range 8: 86100607 to 86100508 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    86100607  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  86100548
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    86100547  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  86100508

Range 9: 91948359 to 91948260 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    91948359  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  91948300
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    91948299  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  91948260

Range 10: 95132144 to 95132045 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    95132144  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  95132085
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    95132084  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  95132045

Range 11: 98078913 to 98079012 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    98078913  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  98078972
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    98078973  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  98079012

Range 12: 283809228 to 283809129 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   283809228  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  283809169
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   283809168  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  283809129

Range 13: 297059670 to 297059571 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   297059670  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  297059611
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   297059610  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  297059571

Range 14: 319901616 to 319901517 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   319901616  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  319901557
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   319901556  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  319901517

Range 15: 326657936 to 326658035 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   326657936  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  326657995
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   326657996  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  326658035

Range 16: 353416065 to 353416164 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   353416065  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  353416124
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   353416125  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  353416164

Range 17: 356930344 to 356930443 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   356930344  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  356930403
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   356930404  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  356930443

Range 18: 366411087 to 366411186 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   366411087  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  366411146
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   366411147  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  366411186

Range 19: 377120553 to 377120454 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   377120553  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  377120494
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   377120493  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  377120454

Range 20: 499977350 to 499977251 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
181.6 bits(200) 0.0 100/100(100%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   499977350  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  499977291
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject   499977290  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  499977251

Range 21: 18952467 to 18952567 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18952467  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGTTGAG  18952526
Query            61  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18952527  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  18952567

Range 22: 70389748 to 70389848 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    70389748  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  70389807
Query            61  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||| |||||||||||||||||||
Subject    70389808  ATGATCAAAGATTTTGGGTTTATACAAAGTTTATGAGAAAC  70389848

Range 23: 325189273 to 325189373 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Subject   325189273  TAGCAATCCTTCTAAGGATTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  325189332
Query            61  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   325189333  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  325189373

Range 24: 436148927 to 436149027 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   436148927  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  436148986
Query            61  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||| |||||||||||||||||||
Subject   436148987  ATGATCAAAGATTTTGGGTTTATACAAAGTTTATGAGAAAC  436149027

Range 25: 463329919 to 463329819 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   463329919  TAGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAG  463329860
Query            61  ATGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||| |||||||||||||||||||
Subject   463329859  ATGATCAAAGATTTTGGGTTTATACAAAGTTTATGAGAAAC  463329819

Range 26: 107759268 to 107759365 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.0 bits(196) 0.0 98/98(100%) 0/98(0%) +1/+1 
Query             4  CAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGATG  63
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   107759268  CAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGATG  107759327
Query            64  ATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||
Subject   107759328  ATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  107759365

Range 27: 2360306 to 2360405 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject     2360306  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  2360365
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     |||||||||||||||||||| |||||||||||||||||||
Subject     2360366  TGATCAAAGATTTTGGGTTTATACAAAGTTTATGAGAAAC  2360405

Range 28: 31920786 to 31920885 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Subject    31920786  AGCAATCCTTCTAAGGATTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  31920845
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    31920846  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  31920885

Range 29: 34555826 to 34555727 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/-1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    34555826  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  34555767
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     |||||||||||||||||||| |||||||||||||||||||
Subject    34555766  TGATCAAAGATTTTGGGTTTATACAAAGTTTATGAGAAAC  34555727

Range 30: 39464501 to 39464600 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             2  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    39464501  AGCAATCCTTCTAAGGACTGGAGTAAGCATCTCGGAGTTGGAATGTACGCTTTGATGAGA  39464560
Query            62  TGATCAAAGATTTTGGGTTTTTACAAAGTTTATGAGAAAC  101
                     |||||||||||||||||||| |||||||||||||||||||
Subject    39464561  TGATCAAAGATTTTGGGTTTATACAAAGTTTATGAGAAAC  39464600

Nucleotide Sequence (101 letters)

Query number:51
Query ID:Query_51
Definition line:zxx-051
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4223.3 102% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18985309 to 18985409 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18985309  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTAGAAG  18985368
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18985369  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  18985409

Range 2: 131523894 to 131523794 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     |||||| ||||||||| |||  ||||||||||||||||||||| || |||||||||||||
Subject   131523894  GCGAGCCGTCTGTGCCGATGACCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  131523835
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     ||||||| || ||||||||||||||||||||||||||||||
Subject   131523834  CGCTTCGCAGTGCTTCCATTGATGAAGAGCACCGCACTATC  131523794

Range 3: 369397419 to 369397319 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     |||||| ||||||||| ||||||||||||||||||||| || | || |||||||||||||
Subject   369397419  GCGAGCCGTCTGTGCCGATGGTCTCTGTCCATCCAGAGACAACGGACAACTTGCTGGAAG  369397360
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     ||||||| ||||||||||||||||||||||||| |||||||
Subject   369397359  CGCTTCGCAGCGCTTCCATTGATGAAGAGCACCACACTATC  369397319

Range 4: 403064507 to 403064607 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     |||||| |||||||||||||  ||||||||| ||||||||||| || |||||||||||||
Subject   403064507  GCGAGCCGTCTGTGCCAATGACCTCTGTCCAACCAGAGGCATCGGACAACTTGCTGGAAG  403064566
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||||||||||||||||||||||
Subject   403064567  CGCTTCGCGGCGCTTCCATTGATGAAGAGCACCGCACTATC  403064607

Range 5: 406352381 to 406352481 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||
Subject   406352381  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  406352440
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||| ||||||||||||| ||||||||||||||||||
Subject   406352441  CGCTTCGTGGCGCTTCCATTGACGAAGAGCACCGCACTATC  406352481

Range 6: 370834061 to 370833962 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||
Subject   370834061  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCAGACAACTTGCTGGAAG  370834002
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTAT  100
                     |||||||  ||||||||||||| |||||||||||||||||
Subject   370834001  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTAT  370833962

Range 7: 104901533 to 104901631 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 91/99(92%) 0/99(0%) +1/+1 
Query             3  GAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAGCG  62
                     |||| ||||||| | |||  ||||||||||||||||||||| || |||||||||||||||
Subject   104901533  GAGCCGTCTGTGTCGATGACCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAGCG  104901592
Query            63  CTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     ||||| |||||||||||||||||||||||||||||||||
Subject   104901593  CTTCGCAGCGCTTCCATTGATGAAGAGCACCGCACTATC  104901631

Range 8: 163960544 to 163960644 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
142.9 bits(157) 0.0 92/101(91%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     ||||||  |||||||| |||  ||||||| |||||||||||||||| |||||||||||||
Subject   163960544  GCGAGCCATCTGTGCCGATGACCTCTGTCTATCCAGAGGCATCAGACAACTTGCTGGAAG  163960603
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||||||||||||||||||||||
Subject   163960604  CGCTTCGCGGCGCTTCCATTGATGAAGAGCACCGCACTATC  163960644

Range 9: 357533869 to 357533769 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
142.9 bits(157) 0.0 92/101(91%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     |||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||
Subject   357533869  GCGAGCGGTCTGTGCCGATGGTCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  357533810
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                      |||||| || |||||||||||||||||||||  |||||||
Subject   357533809  TGCTTCGCAGTGCTTCCATTGATGAAGAGCACTACACTATC  357533769

Range 10: 380330039 to 380329939 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
142.9 bits(157) 0.0 92/101(91%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| | || ||||||||||||||||||||| || |||||||||||||
Subject   380330039  GCAAGCCGTCTGTGCCGACGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  380329980
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||| ||||||||||||| ||||||||||||||||||
Subject   380329979  CGCTTCGTGGCGCTTCCATTGACGAAGAGCACCGCACTATC  380329939

Range 11: 148708764 to 148708857 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 87/94(93%) 0/94(0%) +1/+1 
Query             8  GTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAGCGCTTCG  67
                     ||||||||| |||| ||||||||||||||||||||| || || |||||||||||||||||
Subject   148708764  GTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAATTTGCTGGAAGCGCTTCG  148708823
Query            68  TAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                      |||||||||||||| ||||||||||||||||||
Subject   148708824  CAGCGCTTCCATTGACGAAGAGCACCGCACTATC  148708857

Range 12: 147782152 to 147782252 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     |||||| ||||||||| |||| ||||||||||||||||||||| || || ||||||||||
Subject   147782152  GCGAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAATTTGCTGGAAG  147782211
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                      ||||||  ||||||||||||| ||||||||||||||||||
Subject   147782212  TGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTATC  147782252

Range 13: 163554000 to 163554100 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     ||||||  |||||||| |||  ||||||| ||||||||||||| || |||||||||||||
Subject   163554000  GCGAGCCATCTGTGCCGATGACCTCTGTCTATCCAGAGGCATCGGACAACTTGCTGGAAG  163554059
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||||||||||||||||||||||
Subject   163554060  CGCTTCGCGGCGCTTCCATTGATGAAGAGCACCGCACTATC  163554100

Range 14: 206548394 to 206548494 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||| ||||| |||| ||||||||||||||||||||| || |||||||||||||
Subject   206548394  GCAAGCCGTCCGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  206548453
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||| ||||||||||||||||||
Subject   206548454  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTATC  206548494

Range 15: 301615524 to 301615424 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || || ||||||||||
Subject   301615524  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAATTTGCTGGAAG  301615465
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||| ||||||||||||||||||
Subject   301615464  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTATC  301615424

Range 16: 304217156 to 304217056 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| |||||||||||||||||||||||| || ||||||||||
Subject   304217156  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCAGACAATTTGCTGGAAG  304217097
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||| |||||||||| |||||||
Subject   304217096  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACCACACTATC  304217056

Range 17: 325861634 to 325861534 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| |||||| |||||||||||||| || |||||||||||||
Subject   325861634  GCAAGCCGTCTGTGCCGATGGCCTCTGTTCATCCAGAGGCATCGGACAACTTGCTGGAAG  325861575
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                      |||||| |||||||||||||||||||||||| ||||||||
Subject   325861574  TGCTTCGCAGCGCTTCCATTGATGAAGAGCACTGCACTATC  325861534

Range 18: 334140478 to 334140378 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     ||||||  |||||||| |||| || ||||||||||||||||||||| |||||||||||||
Subject   334140478  GCGAGCCATCTGTGCCGATGGCCTTTGTCCATCCAGAGGCATCAGACAACTTGCTGGAAG  334140419
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     | |||||  ||||||||||||| ||||||||||||||||||
Subject   334140418  CACTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTATC  334140378

Range 19: 381154588 to 381154688 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || || ||||||||||
Subject   381154588  GCAAGCGGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAATTTGCTGGAAG  381154647
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||| ||||||||||||||||||
Subject   381154648  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTATC  381154688

Range 20: 350081548 to 350081645 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
137.4 bits(151) 0.0 89/98(91%) 0/98(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||
Subject   350081548  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  350081607
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACT  98
                     |||||||  ||||||||||||| |||||||||||||||
Subject   350081608  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACT  350081645

Range 21: 402738117 to 402738020 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
137.4 bits(151) 0.0 89/98(91%) 0/98(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||||||||||||| |||| ||||||||||||||||||||| || |||||||||||||
Subject   402738117  GCAAGCTGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  402738058
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACT  98
                     |||||||   |||||||||||| |||||||||||||||
Subject   402738057  CGCTTCGCGACGCTTCCATTGACGAAGAGCACCGCACT  402738020

Range 22: 178078069 to 178077970 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 90/100(90%) 0/100(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||
Subject   178078069  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  178078010
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTAT  100
                     |||||||  | ||||||||||| |||||||||||||||||
Subject   178078009  CGCTTCGCGGTGCTTCCATTGACGAAGAGCACCGCACTAT  178077970

Range 23: 330255290 to 330255196 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 87/95(92%) 0/95(0%) +1/-1 
Query             6  CTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAGCGCTT  65
                     ||||||||||  |||| ||||||||||||||||||||| || |||||||| |||| ||||
Subject   330255290  CTGTCTGTGCTGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTAGAAGTGCTT  330255231
Query            66  CGTAGCGCTTCCATTGATGAAGAGCACCGCACTAT  100
                     || ||||||||||||||||||||||||||||||||
Subject   330255230  CGCAGCGCTTCCATTGATGAAGAGCACCGCACTAT  330255196

Range 24: 441378751 to 441378850 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 90/100(90%) 0/100(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||
Subject   441378751  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  441378810
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTAT  100
                      ||||||  ||||||||||||| |||||||||||||||||
Subject   441378811  TGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTAT  441378850

Range 25: 470456085 to 470455989 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
135.6 bits(149) 0.0 88/97(91%) 0/97(0%) +1/-1 
Query             4  AGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAGCGC  63
                     ||| ||||||||| |||| |||||| |||||||||||||| || ||||||||||||| ||
Subject   470456085  AGCCGTCTGTGCCGATGGCCTCTGTTCATCCAGAGGCATCGGACAACTTGCTGGAAGTGC  470456026
Query            64  TTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTAT  100
                     ||||  |||||||||||||||||||||||||||||||
Subject   470456025  TTCGCGGCGCTTCCATTGATGAAGAGCACCGCACTAT  470455989

Range 26: 142428263 to 142428362 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
134.7 bits(148) 0.0 91/101(90%) 1/101(1%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||
Subject   142428263  GCAAGCCGTCTGTGCCGATGG-CTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  142428322
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||| ||||||||||||||| ||
Subject   142428323  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTGTC  142428363

Range 27: 319929684 to 319929786 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
134.7 bits(148) 0.0 92/103(89%) 2/103(2%) +1/+1 
Query             1  GCGAGCTGTCT--GTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGA  60
                     |||||| ||||  ||||| |||  ||||||||| |||||||||||||| |||||||||||
Subject   319929684  GCGAGCCGTCTCTGTGCCGATGACCTCTGTCCAACCAGAGGCATCAGACAACTTGCTGGA  319929743
Query            61  AGCGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  103
                     |||||||||  ||||||||||||||||||||||| ||||||||
Subject   319929744  AGCGCTTCGCGGCGCTTCCATTGATGAAGAGCACTGCACTATC  319929786

Range 28: 1709839 to 1709939 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || |||||||||||||
Subject     1709839  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTGGAAG  1709898
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||| ||||||||| ||||| ||
Subject     1709899  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACTGCACTGTC  1709939

Range 29: 10024510 to 10024410 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || ||| ||||||||| |||| ||||||||||||||||||||| || |||||||| ||||
Subject    10024510  GCAAGCCGTCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAACTTGCTAGAAG  10024451
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                      ||||||  ||||||||||||| ||||||||||||||||||
Subject    10024450  TGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTATC  10024410

Range 30: 36892679 to 36892579 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/-1 
Query             1  GCGAGCTGTCTGTGCCAATGGTCTCTGTCCATCCAGAGGCATCAGAGAACTTGCTGGAAG  60
                     || |||  |||||||| |||| ||||||||||||||||||||| || || ||||||||||
Subject    36892679  GCAAGCCATCTGTGCCGATGGCCTCTGTCCATCCAGAGGCATCGGACAATTTGCTGGAAG  36892620
Query            61  CGCTTCGTAGCGCTTCCATTGATGAAGAGCACCGCACTATC  101
                     |||||||  ||||||||||||| ||||||||||||||||||
Subject    36892619  CGCTTCGCGGCGCTTCCATTGACGAAGAGCACCGCACTATC  36892579

Nucleotide Sequence (101 letters)

Query number:52
Query ID:Query_52
Definition line:zxx-052
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5052.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 18986895 to 18986995 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    18986895  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  18986954
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18986955  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  18986995

Range 2: 357532276 to 357532176 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   357532276  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  357532217
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      ||||||||||||||||||||||||||||||||||||||||
Subject   357532216  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  357532176

Range 3: 470454489 to 470454389 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   470454489  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  470454430
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      ||||||||||||||||||||||||||||||||||||||||
Subject   470454429  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  470454389

Range 4: 33019937 to 33019837 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    33019937  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  33019878
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject    33019877  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  33019837

Range 5: 37072986 to 37073086 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    37072986  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  37073045
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject    37073046  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  37073086

Range 6: 56780718 to 56780818 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    56780718  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  56780777
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject    56780778  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  56780818

Range 7: 66446867 to 66446767 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    66446867  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  66446808
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject    66446807  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  66446767

Range 8: 74353652 to 74353552 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    74353652  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  74353593
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject    74353592  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  74353552

Range 9: 77521758 to 77521658 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    77521758  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  77521699
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject    77521698  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  77521658

Range 10: 80509084 to 80508984 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    80509084  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTTGGAA  80509025
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject    80509024  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  80508984

Range 11: 131522340 to 131522240 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   131522340  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  131522281
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject   131522280  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  131522240

Range 12: 162113230 to 162113130 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   162113230  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  162113171
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject   162113170  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  162113130

Range 13: 235764478 to 235764578 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 
Subject   235764478  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAG  235764537
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      ||||||||||||||||||||||||||||||||||||||||
Subject   235764538  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  235764578

Range 14: 396605909 to 396605809 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   396605909  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  396605850
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      ||||||||||||||||||||||||||||||||||| ||||
Subject   396605849  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGAAAGG  396605809

Range 15: 399027156 to 399027256 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   399027156  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  399027215
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject   399027216  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  399027256

Range 16: 294613827 to 294613728 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 97/100(97%) 0/100(0%) +1/-1 
Query             2  CTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAAC  61
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Subject   294613827  CTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAAG  294613768
Query            62  GCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                     |||||||||||||||||||||||||||||||| |||||||
Subject   294613767  GCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  294613728

Range 17: 302124231 to 302124330 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 97/100(97%) 0/100(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   302124231  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  302124290
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAG  100
                      |||||||||||||||||||||||||||||||| ||||||
Subject   302124291  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAG  302124330

Range 18: 55193487 to 55193587 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    55193487  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTTGGAA  55193546
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                       ||||||||||||||||||||||||||||||||||| |||
Subject    55193547  GACCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCTAGG  55193587

Range 19: 65142619 to 65142719 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    65142619  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  65142678
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      ||||||||||||| |||||||||||||||||| |||||||
Subject    65142679  GGCCGAATTTGGGGTGCTATATACGCCTAAGTCGGGCAAGG  65142719

Range 20: 68259731 to 68259831 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    68259731  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  68259790
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||| ||||||||| |||||||
Subject    68259791  GGCCGAATTTGGGGCGCTATATAAGCCTAAGTCGGGCAAGG  68259831

Range 21: 103367529 to 103367629 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   103367529  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  103367588
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||| ||||||||||| |||||||
Subject   103367589  GGCCGAATTTGGGGCGCTATAGACGCCTAAGTCGGGCAAGG  103367629

Range 22: 103595998 to 103595898 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Subject   103595998  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGAAA  103595939
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject   103595938  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  103595898

Range 23: 104903127 to 104903227 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   104903127  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  104903186
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| | |||||
Subject   104903187  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGACAAGG  104903227

Range 24: 136902877 to 136902777 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   136902877  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  136902818
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      ||||||||||||| |||||||||||||||||| |||||||
Subject   136902817  GGCCGAATTTGGGGTGCTATATACGCCTAAGTCGGGCAAGG  136902777

Range 25: 138571792 to 138571892 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Subject   138571792  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTGGGCGAAGCCCCTAGTATTCGGAA  138571851
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject   138571852  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  138571892

Range 26: 174983079 to 174982979 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   174983079  TCCCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  174983020
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject   174983019  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  174982979

Range 27: 260371910 to 260371810 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   260371910  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  260371851
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||| ||||||||| |||||||
Subject   260371850  GGCCGAATTTGGGGCGCTATATATGCCTAAGTCGGGCAAGG  260371810

Range 28: 266629838 to 266629938 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 
Subject   266629838  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAG  266629897
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||||||||||||| |||||||
Subject   266629898  GGCCGAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  266629938

Range 29: 309203530 to 309203430 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   309203530  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  309203471
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      ||| |||||||||||||||||||||||||||| |||||||
Subject   309203470  GGCCTAATTTGGGGCGCTATATACGCCTAAGTCGGGCAAGG  309203430

Range 30: 319550768 to 319550668 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTGGGAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   319550768  TCTCACTTAGCCATAGAAGTCTACAATTTTAAATTTTGGCGAAGCCCCTAGTATTCGGAA  319550709
Query            61  CGCCGAATTTGGGGCGCTATATACGCCTAAGTCAGGCAAGG  101
                      |||||||||||||||||||||| ||||||||| |||||||
Subject   319550708  GGCCGAATTTGGGGCGCTATATATGCCTAAGTCGGGCAAGG  319550668

Nucleotide Sequence (101 letters)

Query number:53
Query ID:Query_53
Definition line:zxx-053
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 319.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 2

Range 1: 19008310 to 19008410 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACATGAGCACAGTCAAGCAAATCTTGCGCTATGTGAAAGGCACTATTAATCTTGGTTGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19008310  ACATGAGCACAGTCAAGCAAATCTTGCGCTATGTGAAAGGCACTATTAATCTTGGCTGCA  19008369
Query            61  AGTACAGAAAGGGAAATGAAGGATTGATCCTTCGTGGATAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19008370  AGTACAGAAAGGGAAATGAAGGATTGATCCTTCGTGGATAC  19008410

Range 2: 381792959 to 381792861 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
140.1 bits(154) 0.0 92/101(91%) 2/101(2%) +1/-1 
Query             1  ACATGAGCACAGTCAAGCAAATCTTGCGCTATGTGAAAGGCACTATTAATCTTGGTTGCA  60
                     |||||||| | |||||||||||||  ||||||||||||| ||||||||||||||| ||||
Subject   381792959  ACATGAGCGCGGTCAAGCAAATCT--CGCTATGTGAAAGACACTATTAATCTTGGCTGCA  381792900
Query            61  AGTACAGAAAGGGAAATGAAGGATTGATCCTTCGTGGATAC  101
                      ||||||||||||||| |||||||||||||||| |||||||
Subject   381792899  CGTACAGAAAGGGAAAGGAAGGATTGATCCTTCATGGATAC  381792859

Nucleotide Sequence (101 letters)

Query number:54
Query ID:Query_54
Definition line:zxx-054
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 1207.7 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 8

Range 1: 19011403 to 19011503 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAGCAGA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19011403  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAACAGA  19011462
Query            61  ACGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACATG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19011463  ACGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACATG  19011503

Range 2: 119567682 to 119567782 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAGCAGA  60
                     ||||||||||||||||||||||||| ||||| ||| || ||||||||| |||||||||||
Subject   119567682  ACTACTGCGAGAAGATTGGCATAAAGAGGTTACTCGCGGCACCTTATATGCCGCAGCAGA  119567741
Query            61  ACGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACATG  101
                     |||||||||||||||||| |||||||||| |||||||||||
Subject   119567742  ACGGGGTTGTTGAAAGGCGCAATCGAACCGTCGTTGACATG  119567782

Range 3: 333219521 to 333219422 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
148.3 bits(163) 0.0 94/101(93%) 1/101(1%) +1/-1 
Query             1  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAGCAGA  60
                     ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Subject   333219521  ACTACAGCGAGAAGATTGGCATAAAAAGGTTCCTCACGGCACCTTATATGCCGCAGCAGA  333219462
Query            61  ACGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACATG  101
                     || ||||| ||||||||| |||||||||| |||||||||||
Subject   333219461  AC-GGGTTATTGAAAGGCGCAATCGAACCGTCGTTGACATG  333219421

Range 4: 178554788 to 178554688 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAGCAGA  60
                     ||||||||||||||||||||||||| ||| |||||| | |||||||||||| ||||||||
Subject   178554788  ACTACTGCGAGAAGATTGGCATAAAGAGGATCCTCATGGCACCTTATACGCGGCAGCAGA  178554729
Query            61  ACGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACATG  101
                     |||||||||||||||||| || ||||||| |||||||||||
Subject   178554728  ACGGGGTTGTTGAAAGGCGCAGTCGAACCGTCGTTGACATG  178554688

Range 5: 181101685 to 181101785 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAGCAGA  60
                     |||||| |||||||||||||||||| |||||||||||| ||||||||||||| || ||||
Subject   181101685  ACTACTACGAGAAGATTGGCATAAAGAGGTTCCTCACGGCACCTTATACGCCACAACAGA  181101744
Query            61  ACGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACATG  101
                     |||||||||||||||||  |||||||||| |||||||||||
Subject   181101745  ACGGGGTTGTTGAAAGGTGCAATCGAACCGTCGTTGACATG  181101785

Range 6: 381794827 to 381794727 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAGCAGA  60
                     |||||||||||||||||||||||||||||||||||| |||| |||||| ||| || ||||
Subject   381794827  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCATGACAACTTATATGCCACAACAGA  381794768
Query            61  ACGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACATG  101
                     | |||||||||||||||| |||||||||| |||||||||||
Subject   381794767  ATGGGGTTGTTGAAAGGCGCAATCGAACCGTCGTTGACATG  381794727

Range 7: 4862163 to 4862262 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  ACTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAGCAGA  60
                     ||||||||||||||||||||||||| |||||||||||| ||||||| |||||  ||||||
Subject     4862163  ACTACTGCGAGAAGATTGGCATAAAGAGGTTCCTCACGGCACCTTAAACGCCATAGCAGA  4862222
Query            61  ACGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACAT  100
                     ||||||||| |||||||| |||||||||| ||||||||||
Subject     4862223  ACGGGGTTGCTGAAAGGCGCAATCGAACCGTCGTTGACAT  4862262

Range 8: 18994674 to 18994773 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.0 bits(155) 0.0 91/100(91%) 0/100(0%) +1/+1 
Query             2  CTACTGCGAGAAGATTGGCATAAAAAGGTTCCTCACGACACCTTATACGCCGCAGCAGAA  61
                     ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||
Subject    18994674  CTACTGCAAGAAGATTGGCATAAAAAGATTCCTCGCGACACCTTATACGCCGCAGCAGAA  18994733
Query            62  CGGGGTTGTTGAAAGGCTCAATCGAACCATCGTTGACATG  101
                     ||||||||||||||||| ||||   | | |||||||||||
Subject    18994734  CGGGGTTGTTGAAAGGCGCAATGTCAACGTCGTTGACATG  18994773

Nucleotide Sequence (101 letters)

Query number:55
Query ID:Query_55
Definition line:zxx-055
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 178.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 1

Range 1: 19016893 to 19016993 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TCCGTGCTAACCATTTGTCATTAGTTGGGGTACTTTTGAAAGTGTCCTTCTTCTCTTCTG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19016893  TCCGTGCTAACCATTTGTCATTAGTTGGGGTACTTTTGAAAGTGTCCTTCTTCTCCTCTG  19016952
Query            61  GTGGTCTGCCCTTGCTGTTGCCATAAGAAGGAACAGTAGTA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19016953  GTGGTCTGCCCTTGCTGTTGCCATAAGAAGGAACAGTAGTA  19016993

Nucleotide Sequence (101 letters)

Query number:56
Query ID:Query_56
Definition line:zxx-056
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4998.8 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19026223 to 19026323 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19026223  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCTGGGT  19026282
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19026283  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  19026323

Range 2: 100015141 to 100015241 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Subject   100015141  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACTGTGCCGGGT  100015200
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   100015201  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  100015241

Range 3: 316908641 to 316908741 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Subject   316908641  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACTGTGCCGGGT  316908700
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   316908701  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  316908741

Range 4: 99218188 to 99218088 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Subject    99218188  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGCCGGGT  99218129
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    99218128  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  99218088

Range 5: 302625686 to 302625786 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Subject   302625686  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGCCGGGT  302625745
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   302625746  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  302625786

Range 6: 443176327 to 443176427 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Subject   443176327  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGCCGGGT  443176386
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   443176387  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  443176427

Range 7: 47151261 to 47151361 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Subject    47151261  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGCCGGGT  47151320
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject    47151321  TGTGATAAACACTGGATTAACCATATATAATACTGGCGACT  47151361

Range 8: 119498798 to 119498898 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Subject   119498798  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGCCGGGT  119498857
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   119498858  TGTGATAAACACCGGATTAACCATATATAATACTGGCAACT  119498898

Range 9: 237710590 to 237710690 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Subject   237710590  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGCCGGGT  237710649
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   237710650  TGTGATAAACACCAGATTAACCATATATAATACTGGCGACT  237710690

Range 10: 442302675 to 442302575 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Subject   442302675  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTACCGGGT  442302616
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   442302615  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  442302575

Range 11: 43864663 to 43864763 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||| ||||||||||||||| ||||| || ||||||
Subject    43864663  ATCTTGAGTACTGATAACTCCTTCCATAGTGTGCCGGTTTATGATAAAACCGTACCGGGT  43864722
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    43864723  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  43864763

Range 12: 50627513 to 50627613 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Subject    50627513  ATCTTGAGTACTGATAACTCCTTCCATATCGTGCCGGTTTATGATAAAACTGTGCCGGGT  50627572
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     ||||||||||||| |||||||||||||||||||||| ||||
Subject    50627573  TGTGATAAACACCAGATTAACCATATATAATACTGGTGACT  50627613

Range 13: 148741603 to 148741503 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||
Subject   148741603  ATCTTGAGTACTGATAACTCCTTCCATATCGTGCCGGTTTATTATAAAACTGTGCCGGGT  148741544
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||| ||||
Subject   148741543  TGTGATAAACACCGGATTAACCATATATAATACTGGTGACT  148741503

Range 14: 164769991 to 164770091 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |
Subject   164769991  ATCTTGACTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGCCGGCT  164770050
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   164770051  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  164770091

Range 15: 236925588 to 236925688 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||||||
Subject   236925588  ATCTTGAGTACTGATAACTCCTTCCATATTGTTCCGGTTTATGATAAAACCGTACCGGGT  236925647
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   236925648  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  236925688

Range 16: 237343955 to 237344055 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Subject   237343955  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTACCGGGT  237344014
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||| ||||||||||
Subject   237344015  TGTGATAAACACCGGATTAACCATATATAAAACTGGCGACT  237344055

Range 17: 284789538 to 284789438 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||
Subject   284789538  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGCTGGGT  284789479
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     ||||||||||||||||||||||||||||||||||| |||||
Subject   284789478  TGTGATAAACACCGGATTAACCATATATAATACTGTCGACT  284789438

Range 18: 358048824 to 358048724 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||
Subject   358048824  ATCTTGAGTACTGATAACTCCTTCCATATTGCGCCGGTTTATGATAAAACTGTACCGGGT  358048765
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject   358048764  TCTGATAAACACCGGATTAACCATATATAATACTGGCGACT  358048724

Range 19: 380277628 to 380277528 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||
Subject   380277628  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTGACGGGT  380277569
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||| ||||||||||||||||||||||||||||
Subject   380277568  TGTGATAAACACTGGATTAACCATATATAATACTGGCGACT  380277528

Range 20: 388802348 to 388802248 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Subject   388802348  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTACCGGGT  388802289
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||| ||||||||||
Subject   388802288  TGTGATAAACACCGGATTAACCATATATAAAACTGGCGACT  388802248

Range 21: 468120097 to 468120197 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||
Subject   468120097  ATCTTGAGTACTGATAACTTCTTCCATAGTGTGCCGGTTTATGATAAAACCGTGCCGGGT  468120156
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   468120157  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  468120197

Range 22: 167757056 to 167756958 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||
Subject   167757056  ATCTTGAGTACTGATAACTCCTTCCATAGTGTGCCGGTTTATGATAAAACCGTGCCGGGT  167756997
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGA  99
                     ||||||||||| |||||||||||||||||||||||||||
Subject   167756996  TGTGATAAACATCGGATTAACCATATATAATACTGGCGA  167756958

Range 23: 60080076 to 60079976 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||| ||||||||||||||||||||||||||||||||| | ||| |||||||||
Subject    60080076  ATCTTGAGTATTGATAACTCCTTCCATATTGTGCCGGTTTATGATATAACCGTGCCGGGT  60080017
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    60080016  TGTGATAAACACCGGATTAACCATATATAATACTGGCAACT  60079976

Range 24: 162768403 to 162768303 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||
Subject   162768403  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGATTTATGATAAATCTGTGCCGGGT  162768344
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     ||||||||| |||||||||||||||||||||| ||||||||
Subject   162768343  TGTGATAAATACCGGATTAACCATATATAATATTGGCGACT  162768303

Range 25: 173406484 to 173406384 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||| |||||||||||||||||| |||||||| ||||| || ||||||
Subject   173406484  ATCTTGAGTACTGATAGCTCCTTCCATATTGTGCCTGTTTATGATAAAACCGTACCGGGT  173406425
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   173406424  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  173406384

Range 26: 183392378 to 183392278 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||||||||||||||||||||||||||| |||||||||||| ||||| || ||||||
Subject   183392378  ATCTTGAGTACTGATAACTCCTTCCATATTGCGCCGGTTTATGATAAAACCGTACCGGGT  183392319
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||||| ||||||
Subject   183392318  TGTGATAAACACCGGATTAACCATATATAATACTAGCGACT  183392278

Range 27: 298815671 to 298815571 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||
Subject   298815671  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTACCGAGT  298815612
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject   298815611  TGTGATAAACACCGGATTAACCATATATAATATTGGCGACT  298815571

Range 28: 358055320 to 358055220 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||||
Subject   358055320  ATCTTGAGTACTGATAACTCCTTCCATATTGCGCCGGTTTATGATAAAATTGTACCGGGT  358055261
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject   358055260  TATGATAAACACCGGATTAACCATATATAATACTGGCGACT  358055220

Range 29: 94611475 to 94611575 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||
Subject    94611475  ATCTTGAGTACCGATAACTCCTTCCATATTGTGCCGGTTTATGATAAAACCGTACCGGGT  94611534
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     ||||||||||||||||||| |||||||||| ||||||||||
Subject    94611535  TGTGATAAACACCGGATTATCCATATATAACACTGGCGACT  94611575

Range 30: 202347704 to 202347604 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  ATCTTGAGTACTGATAACTCCTTCCATATTGTGCCGGTTTATGACAAAACTGTGCCGGGT  60
                     ||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||
Subject   202347704  ATCATGAGTACTGATAACTCCTTCCATATTGTGTCGGTTTATGATAAAACTGTACCGGGT  202347645
Query            61  TGTGATAAACACCGGATTAACCATATATAATACTGGCGACT  101
                     ||||||||||||||||||| |||||||||| ||||||||||
Subject   202347644  TGTGATAAACACCGGATTATCCATATATAACACTGGCGACT  202347604

Nucleotide Sequence (101 letters)

Query number:57
Query ID:Query_57
Definition line:zxx-057
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 4406.3 145% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19027220 to 19027320 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  TTCTTGAACTGGATGGTAAACCGGATTTGAGAGCTTCAAAGCTTTGTGGGAGACATCTTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    19027220  TTCTTGAACTGGATGGTAAACCGGATTTGAGAGCTTCAAAGCTTTGTGGGAGACATCTTT  19027279
Query            61  CCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTTTAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19027280  CCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTTTAGC  19027320

Range 2: 351341755 to 351341655 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  TTCTTGAACTGGATGGTAAACCGGATTTGAGAGCTTCAAAGCTTTGTGGGAGACATCTTT  60
                     ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   351341755  TTCTTGAACCGGATGGTAAACCGGATTTGAGAGCTTCAAAGCTTTGTGGGAGACATCTTT  351341696
Query            61  CCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTTTAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   351341695  CCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTTTAGC  351341655

Range 3: 23313590 to 23313690 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TTCTTGAACTGGATGGTAAACCGGATTTGAGAGCTTCAAAGCTTTGTGGGAGACATCTTT  60
                     |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Subject    23313590  TTCTTGAACCAGATGGTAAACCGGATTTGAGAGCTTCAAAGCTTTGTGGGAGACATCTTT  23313649
Query            61  CCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTTTAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    23313650  CCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTTTAGC  23313690

Range 4: 105924200 to 105924296 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 93/97(96%) 1/97(1%) +1/+1 
Query             1  TTCTTGAACTGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     ||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||
Subject   105924200  TTCTTGAACCGGATGTTAAACCGGATATTGAGAGCTTCAAAGCTTTATGGGAGACATCTT  105924259
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  97
                     |||||||||||||||||||||||||||||||||||||
Subject   105924260  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  105924296

Range 5: 37707531 to 37707435 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 92/97(95%) 1/97(1%) +1/-1 
Query             1  TTCTTGAACTGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||
Subject    37707531  TTCTTGAACCGGATGTTAAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  37707472
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  97
                     |||||||||| ||||||||||||||||| ||||||||
Subject    37707471  TCCCTTGAACTGGATTTTAAACCGGAATTTTCATTTT  37707435

Range 6: 240236350 to 240236254 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 92/97(95%) 1/97(1%) +1/-1 
Query             1  TTCTTGAACTGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     ||||||||| ||||| |||||||||| ||||||||||||||||||| ||| |||||||||
Subject   240236350  TTCTTGAACCGGATGTTAAACCGGATATTGAGAGCTTCAAAGCTTTATGGAAGACATCTT  240236291
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  97
                     |||||||||||||||||||||||||||||||||||||
Subject   240236290  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  240236254

Range 7: 346422268 to 346422366 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 94/99(95%) 2/99(2%) +1/+1 
Query             1  TTCTTGAAC-TGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| |||||  | |||||||| ||||||||||||||||||||||||||||||||
Subject   346422268  TTCTTGAACCTGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  346422327
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTT  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   346422328  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTT  346422366

Range 8: 81750846 to 81750947 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  TTCTTGAACTGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||
Subject    81750846  TTCTTGAACCGGATGTTAAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATTTT  81750905
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTTTAGC  102
                     ||||||||||||||||||||||||||||| |  ||||| |||
Subject    81750906  TCCCTTGAACCGGATTTTAAACCGGAATCCTTCTTTTTAAGC  81750947

Range 9: 123143514 to 123143418 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 91/97(94%) 1/97(1%) +1/-1 
Query             1  TTCTTGAACTGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     ||||||||||||||  |||||||||| |||||||||||||||||||  ||||||||||||
Subject   123143514  TTCTTGAACTGGATATTAAACCGGATATTGAGAGCTTCAAAGCTTTACGGGAGACATCTT  123143455
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  97
                     || ||||||||||||||||||||||||||||||||||
Subject   123143454  TCTCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  123143418

Range 10: 336088634 to 336088730 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 91/97(94%) 1/97(1%) +1/+1 
Query             1  TTCTTGAACTGGATGGTAAACCGGATT-TGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     ||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||
Subject   336088634  TTCTTGAACCGAATGTTAAACCGGATTCTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  336088693
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  97
                     ||||||||||||||| || ||||||||||||||||||
Subject   336088694  TCCCTTGAACCGGATCTTGAACCGGAATCTTCATTTT  336088730

Range 11: 450833314 to 450833412 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 93/99(94%) 2/99(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  | |||||||| ||||||||||||||||||||||||||||||||
Subject   450833314  TTCTTGAACCGGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  450833373
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTT  99
                     |||||||||||||||||||||||||||||||||||||||
Subject   450833374  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTT  450833412

Range 12: 501364592 to 501364496 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 91/97(94%) 1/97(1%) +1/-1 
Query             1  TTCTTGAACTGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     ||||||||| ||||| | || ||||| |||||||| ||||||||||||||||||||||||
Subject   501364592  TTCTTGAACCGGATGTTGAAACGGATATTGAGAGCCTCAAAGCTTTGTGGGAGACATCTT  501364533
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  97
                     |||||||||||||||||||||||||||||||||||||
Subject   501364532  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  501364496

Range 13: 99217408 to 99217311 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 92/98(94%) 2/98(2%) +1/-1 
Query             1  TTCTTGAACT-GGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     |||||||||  ||||  | |||||||| ||||||||||||||||||||||||||||||||
Subject    99217408  TTCTTGAACCAGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  99217349
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||||||||||||||||||||||||||||||||||||||
Subject    99217348  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  99217311

Range 14: 167756276 to 167756179 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 92/98(94%) 2/98(2%) +1/-1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  | |||||||| ||||||||||||||||||||||||||||||||
Subject   167756276  TTCTTGAACCGGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  167756217
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||||||||||||||||||||||||||||||||||||||
Subject   167756216  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  167756179

Range 15: 284788761 to 284788664 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 92/98(94%) 2/98(2%) +1/-1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || || || |||||||| ||||||||||||||||||||||||||||||||
Subject   284788761  TTCTTGAACCGGGATTGTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  284788702
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     |||||||||||||||||||||||||||||||| |||||
Subject   284788701  TTCCCTTGAACCGGATTTTAAACCGGAATCTTTATTTT  284788664

Range 16: 361580092 to 361580189 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 92/98(94%) 2/98(2%) +1/+1 
Query             1  TTCTTGAAC-TGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| |||||  | |||||||| ||||||||||||||||||||||||||||||||
Subject   361580092  TTCTTGAACCTGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  361580151
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||||||||||| ||||||||||||||||||||||||||
Subject   361580152  TTCCCTTGAACTGGATTTTAAACCGGAATCTTCATTTT  361580189

Range 17: 383440415 to 383440512 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 92/98(94%) 2/98(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  |||||||||| ||||||||||||||||||||||||||||||||
Subject   383440415  TTCTTGAACCGGGATTTTAAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  383440474
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||| ||||||||||||||||||||||||||||||||||
Subject   383440475  TTCTCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  383440512

Range 18: 446163905 to 446164002 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 92/98(94%) 2/98(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  | |||||||| ||||||||||||||||||||||||||||||||
Subject   446163905  TTCTTGAACCGGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  446163964
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||||||||||||||||||||||||||||||||||||||
Subject   446163965  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  446164002

Range 19: 156060209 to 156060113 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.0 bits(155) 0.0 90/97(93%) 1/97(1%) +1/-1 
Query             1  TTCTTGAACTGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     |||||||||  |||| |||||||||| |||||||||||||| |||| |||||||||||||
Subject   156060209  TTCTTGAACCAGATGTTAAACCGGATATTGAGAGCTTCAAAACTTTATGGGAGACATCTT  156060150
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  97
                     ||||||||||||||||||||||||| |||||||||||
Subject   156060149  TCCCTTGAACCGGATTTTAAACCGGGATCTTCATTTT  156060113

Range 20: 442301765 to 442301667 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.0 bits(155) 0.0 92/99(93%) 2/99(2%) +1/-1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  | |||||||| ||||||||||||||||||||||||||||||||
Subject   442301765  TTCTTGAACCGGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  442301706
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTTT  99
                     ||||||||| |||||||||||||||||||||||||||||
Subject   442301705  TTCCCTTGAGCCGGATTTTAAACCGGAATCTTCATTTTT  442301667

Range 21: 62065949 to 62065852 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/-1 
Query             1  TTCTTGAA-CTGGATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     |||||||| | ||||  | |||||||| ||||||||||||||||||||||||||||||||
Subject    62065949  TTCTTGAATCGGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  62065890
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     |||||||||||||||||||||||| |||||||||||||
Subject    62065889  TTCCCTTGAACCGGATTTTAAACCAGAATCTTCATTTT  62065852

Range 22: 94612445 to 94612542 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  | |||||||| ||||||||||||||||||||||||||||||||
Subject    94612445  TTCTTGAACCGGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  94612504
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     |||||||||| |||||||||||||||||||||||||||
Subject    94612505  TTCCCTTGAATCGGATTTTAAACCGGAATCTTCATTTT  94612542

Range 23: 165679694 to 165679791 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  |||||||||| ||||||||||||||| ||||||||||||||||
Subject   165679694  TTCTTGAACCGGGATTTTAAACCGGATATTGAGAGCTTCAAAGATTTGTGGGAGACATCT  165679753
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||| ||||||||||||||||||||||||||||||||||
Subject   165679754  TTCTCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  165679791

Range 24: 237904462 to 237904559 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  | |||||||| ||||||||||||||||||||||||||||||||
Subject   237904462  TTCTTGAACCGGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  237904521
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     |||||||||||||||||||||||| |||||||||||||
Subject   237904522  TTCCCTTGAACCGGATTTTAAACCAGAATCTTCATTTT  237904559

Range 25: 316909541 to 316909638 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  |||||||||| ||||||||||||||||||||||||||||||||
Subject   316909541  TTCTTGAACCGGGATTTTAAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  316909600
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||| ||||||||||||||||||||| ||||||||||||
Subject   316909601  TTCTCTTGAACCGGATTTTAAACCGAAATCTTCATTTT  316909638

Range 26: 337270428 to 337270525 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  | |||||||| ||||||||||||||||||||||||||||||||
Subject   337270428  TTCTTGAACCGGGATTTTGAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  337270487
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     |||||||||||||||| |||||||||||||||||||||
Subject   337270488  TTCCCTTGAACCGGATCTTAAACCGGAATCTTCATTTT  337270525

Range 27: 358054407 to 358054310 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/-1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  |||||||||| ||||||||||||||||||||||||||||||||
Subject   358054407  TTCTTGAACCGGGATTTTAAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  358054348
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||| |||||||||||||||||||||||||||| |||||
Subject   358054347  TTCTCTTGAACCGGATTTTAAACCGGAATCTTTATTTT  358054310

Range 28: 380276783 to 380276686 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/-1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  |||||||||| |||||||||||||||||||||||||||||| |
Subject   380276783  TTCTTGAACCGGGATTTTAAACCGGATATTGAGAGCTTCAAAGCTTTGTGGGAGACATGT  380276724
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||| ||||||||||||||||||||||||||||||||||
Subject   380276723  TTCTCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  380276686

Range 29: 437921730 to 437921825 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 89/96(93%) 1/96(1%) +1/+1 
Query             1  TTCTTGAACTGGATGGTAAACCGGATTT-GAGAGCTTCAAAGCTTTGTGGGAGACATCTT  60
                     ||||||||| ||||| |||||||||||| |||||||| ||||||||||| ||||||||||
Subject   437921730  TTCTTGAACCGGATGTTAAACCGGATTTTGAGAGCTTAAAAGCTTTGTGCGAGACATCTT  437921789
Query            61  TCCCTTGAACCGGATTTTAAACCGGAATCTTCATTT  96
                     |||||||||||| || ||||||||||||||||||||
Subject   437921790  TCCCTTGAACCGAATCTTAAACCGGAATCTTCATTT  437921825

Range 30: 489731084 to 489731181 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/98(93%) 2/98(2%) +1/+1 
Query             1  TTCTTGAACTGG-ATGGTAAACCGGAT-TTGAGAGCTTCAAAGCTTTGTGGGAGACATCT  60
                     ||||||||| || ||  |||||||||| |||||||||||||||||||||| |||||||||
Subject   489731084  TTCTTGAACCGGGATTTTAAACCGGATATTGAGAGCTTCAAAGCTTTGTGTGAGACATCT  489731143
Query            61  TTCCCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  98
                     ||| ||||||||||||||||||||||||||||||||||
Subject   489731144  TTCTCTTGAACCGGATTTTAAACCGGAATCTTCATTTT  489731181

Nucleotide Sequence (101 letters)

Query number:58
Query ID:Query_58
Definition line:zxx-058
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4253.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19034099 to 19034199 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19034099  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCTGGTC  19034158
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19034159  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  19034199

Range 2: 483698251 to 483698151 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Subject   483698251  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTTCCGATCGAAGGCGAGTCTCCGGTG  483698192
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||||||||||||||||| ||| |||
Subject   483698191  GCAGTCGAGACGCGACGGGCTAGGGAGCTTCTTCAGACAGC  483698151

Range 3: 43581287 to 43581387 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| 
Subject    43581287  AACATTGTCGCTGCCACTTCACGGCTGGCGGCCCTACCGATCGAAGGCGAGTCTCCGGTG  43581346
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||||||||||||||||||||| |||
Subject    43581347  GCAGTCGAGACGCGACGGGCTAGGGAGCTTCTTTAGACAGC  43581387

Range 4: 392913024 to 392912925 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 93/100(93%) 0/100(0%) +1/-1 
Query             2  ACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTCG  61
                     ||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |
Subject   392913024  ACATTGTCGCTGCTGCTTCACGGCTGGCGGCCCTACCGATCGAAGGCGAGTCTCCGGTGG  392912965
Query            62  CAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     ||||||||||||| |||||||||||||||||| ||| |||
Subject   392912964  CAGTCGAGACGCGACGGGCTAGGGAGCTTCTTCAGACAGC  392912925

Range 5: 54982938 to 54983038 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| 
Subject    54982938  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCATCCCGATCGAAGGCGAGTCTCCGGTG  54982997
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| || | ||||||||||||| | | |||
Subject    54982998  GCAGTCGAGACGCGACGAGTTAGGGAGCTTCTTCACACAGC  54983038

Range 6: 123509753 to 123509853 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | | 
Subject   123509753  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGAGTCTCTGATG  123509812
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| ||||||||||||||||| |||
Subject   123509813  GCAGTCGAGACGCGACGGGTTAGGGAGCTTCTTTAGACAGC  123509853

Range 7: 250411197 to 250411097 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| 
Subject   250411197  AACATTGTCGCTGCCGCTTCACGACTGGCGGCCATCCCGATCGAAGGCGAGTCTCCGGTG  250411138
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| ||||||||||||| ||| |||
Subject   250411137  GCAGTCGAGACGCGACGGGTTAGGGAGCTTCTTCAGACAGC  250411097

Range 8: 271988677 to 271988777 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| 
Subject   271988677  AACATTGTCGCTGCCGCTTCACGACTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTG  271988736
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||  ||||||||||| |||||| ||| |||
Subject   271988737  GCAGTCGAGACGCAACGGGCTAGGGAACTTCTTCAGACAGC  271988777

Range 9: 351853305 to 351853205 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| 
Subject   351853305  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGAGTCTCTGGTG  351853246
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| ||||||||||||| ||| |||
Subject   351853245  GCAGTCGAGACGCGACGGGTTAGGGAGCTTCTTCAGACAGC  351853205

Range 10: 409666591 to 409666491 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| | 
Subject   409666591  AACATTGTCGCAGCCGCTTCACGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGATG  409666532
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||| | |||||||||||||||||| ||| |||
Subject   409666531  GCAGTCGAGACGTGACGGGCTAGGGAGCTTCTTCAGACAGC  409666491

Range 11: 444476380 to 444476480 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| 
Subject   444476380  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCCTACCGATCGAAGGCGAGTCTCCGGTG  444476439
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                      |||||||||||||  ||||||||||||||||| ||| |||
Subject   444476440  TCAGTCGAGACGCGATGGGCTAGGGAGCTTCTTCAGACAGC  444476480

Range 12: 216223330 to 216223430 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
142.9 bits(157) 0.0 92/101(91%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| || 
Subject   216223330  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGAGTCTCCAGTG  216223389
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| ||||||| ||||| ||| |||
Subject   216223390  GCAGTCGAGACGCGACGGGTTAGGGAGGTTCTTCAGACAGC  216223430

Range 13: 250084730 to 250084630 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
142.9 bits(157) 0.0 92/101(91%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| 
Subject   250084730  AACATTGTCGCTACCGCCTCATGGCTGGCGGCCATCCCGATCGAAGGCGAGTCTCCGGTG  250084671
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| | ||||||||||| ||| |||
Subject   250084670  GCAGTCGAGACGCGTCGGGTTTGGGAGCTTCTTCAGACAGC  250084630

Range 14: 370647655 to 370647754 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 92/101(91%) 1/101(1%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||||||| 
Subject   370647655  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCG-TCGAAGGTGAGTCTCCGGTG  370647714
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| ||||||||||||| ||| |||
Subject   370647715  GCAGTCGAGACGCGACGGGTTAGGGAGCTTCTTCAGACAGC  370647755

Range 15: 30186631 to 30186731 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     |||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| 
Subject    30186631  AACATTGTTGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGAGTCTCCGGTG  30186690
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     ||||| |||||||| |||| |||||| |||||| ||| |||
Subject    30186691  GCAGTTGAGACGCGACGGGTTAGGGAACTTCTTCAGACAGC  30186731

Range 16: 215454010 to 215453910 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||||| |||||||| |||||||||||||||||||| || || 
Subject   215454010  AACATTGTCGCTGCCGCTTCATGACTGGCGGCTCTCCCGATCGAAGGCGAGTCCCCAGTA  215453951
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||||||||||||| ||| ||| |||
Subject   215453950  GCGGTCGAGACGCGACGGGCTAGGGAGCTCCTTCAGACAGC  215453910

Range 17: 36826696 to 36826796 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |  
Subject    36826696  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCAGCG  36826755
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| || |||||||||| ||| |||
Subject    36826756  GCAGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  36826796

Range 18: 51148451 to 51148551 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  
Subject    51148451  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCGGCG  51148510
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| || |||||||||| ||| |||
Subject    51148511  GCGGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  51148551

Range 19: 81824687 to 81824787 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| | ||||||||||||||||||||||||||||| || || 
Subject    81824687  AACATTGTCGCTGCCGCTTCACGACTGGCGGCCCTCCCGATCGAAGGCGAGTCCCCAGTG  81824746
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||| ||| |||||||||||||| ||| ||| |||
Subject    81824747  GCGGTCGAGATGCGACGGGCTAGGGAGCTCCTTCAGACAGC  81824787

Range 20: 111551115 to 111551215 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  
Subject   111551115  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCGGCG  111551174
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| || |||||||||| ||| |||
Subject   111551175  GCGGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  111551215

Range 21: 137318828 to 137318928 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |  
Subject   137318828  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCAGCA  137318887
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| || |||||||||| ||| |||
Subject   137318888  GCGGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  137318928

Range 22: 153187517 to 153187617 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||||  
Subject   153187517  AACATTGTCGCTGCCACTTCACGGCTGGCGGCCATCCCGATCGAAGGTGAGTCTCCGGCG  153187576
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| ||||||||||||| ||| |||
Subject   153187577  GCGGTCGAGACGCGTCGGGTTAGGGAGCTTCTTCAGACAGC  153187617

Range 23: 154539815 to 154539915 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |  
Subject   154539815  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCAGCG  154539874
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| || |||||||||| ||| |||
Subject   154539875  GCAGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  154539915

Range 24: 166583490 to 166583590 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  
Subject   166583490  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCGGCG  166583549
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| || |||||||||| ||| |||
Subject   166583550  GCGGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  166583590

Range 25: 235179228 to 235179128 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |  
Subject   235179228  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCAGCA  235179169
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| || |||||||||| ||| |||
Subject   235179168  GCGGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  235179128

Range 26: 279768485 to 279768585 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  
Subject   279768485  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCGGCG  279768544
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| || |||||||||| ||| |||
Subject   279768545  GCGGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  279768585

Range 27: 295422678 to 295422778 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||| ||||||||||| | ||||||||||||||||||||||||||||| || || 
Subject   295422678  AACATTGTCACTGCCGCTTCACGACTGGCGGCCCTCCCGATCGAAGGCGAGTCCCCAGTA  295422737
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||||||||||||| ||| ||| |||
Subject   295422738  GCGGTCGAGACGCGACGGGCTAGGGAGCTCCTTCAGACAGC  295422778

Range 28: 335022781 to 335022681 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||  ||| ||||| |||||||||| 
Subject   335022781  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCTAATCAAAGGCAAGTCTCCGGTG  335022722
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     |||||||||||||| |||| ||||||||||||| ||| |||
Subject   335022721  GCAGTCGAGACGCGACGGGTTAGGGAGCTTCTTCAGACAGC  335022681

Range 29: 337629568 to 337629668 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/+1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||  
Subject   337629568  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCATCCCAATCGAAGGCGATTCTCCGGCG  337629627
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| || |||||||||| ||| |||
Subject   337629628  GCGGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  337629668

Range 30: 350868719 to 350868619 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
133.8 bits(147) 0.0 90/101(89%) 0/101(0%) +1/-1 
Query             1  AACATTGTCGCTGCCGCTTCATGGCTGGCGGCCCTCCCGATCGAAGGCGAGTCTCCGGTC  60
                     ||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  
Subject   350868719  AACATTGTCGCTGCCGCTTCACGGCTGGCGGCCATCCCGATCGAAGGCGATTCTCCGGCG  350868660
Query            61  GCAGTCGAGACGCGGCGGGCTAGGGAGCTTCTTTAGAGAGC  101
                     || ||||||||||| |||| || |||||||||| ||| |||
Subject   350868659  GCGGTCGAGACGCGTCGGGTTAAGGAGCTTCTTCAGACAGC  350868619

Nucleotide Sequence (101 letters)

Query number:59
Query ID:Query_59
Definition line:zxx-059
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 3839.2 101% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19039291 to 19039391 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19039291  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATACTTGG  19039350
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19039351  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  19039391

Range 2: 168930276 to 168930372 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
146.5 bits(161) 0.0 93/101(92%) 4/101(4%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| ||||||||||||||| |||||||||||||    |||||||||||||||
Subject   168930276  TATTTGGTTATCTTTTTATAACTTTGGTTATAAACCTTGGT----TATATATATATTTGG  168930335
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     |||||||||||||||| ||||||||||||||||||||||||
Subject   168930336  GCATTATGACCCGCCCAGTGGTAAACCGCCAGGGCGCTTTA  168930376

Range 3: 123516279 to 123516375 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.9 bits(156) 0.0 92/101(91%) 4/101(4%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| ||| ||||||||||| |||||||||||||    |||||||||||||||
Subject   123516279  TATTTGGTTATCTTTCTATAACTTTGGTTATAAACCTTGGT----TATATATATATTTGG  123516338
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     ||||||||||||||||||||||||||||| |||||||||||
Subject   123516339  GCATTATGACCCGCCCGGTGGTAAACCGCTAGGGCGCTTTA  123516379

Range 4: 351833166 to 351833068 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
135.6 bits(149) 0.0 91/101(90%) 2/101(2%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||||| | | |||| |||||||||||||  |||||||||||||||||
Subject   351833166  TATTTGGTTATCTTTTTACATCCTTGGTTATAAACCTTGGT--TATATATATATATTTGG  351833107
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     ||||||||| || ||||||||||||||||||||||||||||
Subject   351833106  GCATTATGATCCACCCGGTGGTAAACCGCCAGGGCGCTTTA  351833066

Range 5: 448646718 to 448646619 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
134.7 bits(148) 0.0 91/101(90%) 1/101(1%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| || |||||||||||||||||||||||||||||
Subject   448646718  TATTTGGTTATCTTTT-ACAACCTTGGTTAAAAACCTTGGTCATATATATATATATTTGG  448646659
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||| ||||||
Subject   448646658  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGTGCTTTA  448646618

Range 6: 409655913 to 409655820 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
132.9 bits(146) 0.0 89/98(91%) 5/98(5%) +1/-1 
Query             5  TGGTTATATTTTTATAA-CTTTGGCTATAAACCTTGGTCATATATATATATATTTGGGCA  64
                     ||||||| ||||||||| |||||| |||||||||||||    ||| ||||||||||||||
Subject   409655913  TGGTTATCTTTTTATAAACTTTGGTTATAAACCTTGGT----TATGTATATATTTGGGCA  409655854
Query            65  TTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  102
                     |||||||||||||||||||||||||||||||| |||||
Subject   409655853  TTATGACCCGCCCGGTGGTAAACCGCCAGGGCACTTTA  409655816

Range 7: 480966649 to 480966745 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
132.9 bits(146) 0.0 90/101(89%) 4/101(4%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || ||| ||||||||||||||||||||||||||||||||||    |||||||||||||||
Subject   480966649  TATTTGTTTATATTTTTATAACTTTGGCTATAAACCTTGGT----TATATATATATTTGG  480966708
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     |||||||||||||||| |||||||  | | |||||||||||
Subject   480966709  GCATTATGACCCGCCCAGTGGTAAGACACTAGGGCGCTTTA  480966749

Range 8: 164735655 to 164735560 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
129.3 bits(142) 0.0 90/101(89%) 5/101(5%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || ||||||||||||| ||||| |||| |||||||||||||||| |||||||    ||||
Subject   164735655  TATTTGGTTATATTTT-ATAACCTTGGTTATAAACCTTGGTCATGTATATAT----TTGG  164735596
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   164735595  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  164735555

Range 9: 216229877 to 216229973 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
129.3 bits(142) 0.0 88/98(90%) 1/98(1%) +1/+1 
Query             4  TTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGGGCA  63
                     ||| |||| ||||   ||| |||| ||||||||||||| ||||||||||||||||||| |
Subject   216229877  TTGATTATCTTTTGC-AACCTTGGTTATAAACCTTGGTTATATATATATATATTTGGGTA  216229936
Query            64  TTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     |||||||||||||||||||||| |||||||||||||||
Subject   216229937  TTATGACCCGCCCGGTGGTAAAACGCCAGGGCGCTTTA  216229974

Range 10: 271995229 to 271995313 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
129.3 bits(142) 0.0 82/89(92%) 4/89(4%) +1/+1 
Query            13  TTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGGGCATTATGACCC  72
                     |||||| |||||||| |||||||||||||    |||||||||||||||||||||||||||
Subject   271995229  TTTTTACAACTTTGGTTATAAACCTTGGT----TATATATATATTTGGGCATTATGACCC  271995288
Query            73  GCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     |||||||||||||||||| ||||||||||
Subject   271995289  GCCCGGTGGTAAACCGCCGGGGCGCTTTA  271995317

Range 11: 335016252 to 335016156 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
128.4 bits(141) 0.0 89/101(88%) 4/101(4%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| ||||| ||||||||| |||||||||||||    | |||||||||||||
Subject   335016252  TATTTGGTTATGTTTTTTTAACTTTGGTTATAAACCTTGGT----TGTATATATATTTGG  335016193
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     |||||||||||||||||| ||||||||||| |||| |||||
Subject   335016192  GCATTATGACCCGCCCGGCGGTAAACCGCCCGGGCACTTTA  335016152

Range 12: 28407187 to 28407282 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 89/101(88%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| ||||| |||| |||||||||||||||| |||||||    ||||
Subject    28407187  TATTTGGTTATCTTTT-ATAACCTTGGTTATAAACCTTGGTCATGTATATAT----TTGG  28407246
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject    28407247  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  28407287

Range 13: 123159335 to 123159240 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 89/101(88%) 5/101(5%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   123159335  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  123159276
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   123159275  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  123159235

Range 14: 131947819 to 131947724 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 89/101(88%) 5/101(5%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   131947819  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  131947760
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   131947759  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  131947719

Range 15: 291622777 to 291622682 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 89/101(88%) 5/101(5%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   291622777  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  291622718
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   291622717  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  291622677

Range 16: 436359606 to 436359701 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 89/101(88%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   436359606  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  436359665
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   436359666  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  436359706

Range 17: 465502614 to 465502519 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 89/101(88%) 5/101(5%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   465502614  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  465502555
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   465502554  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  465502514

Range 18: 350862136 to 350862044 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
123.9 bits(136) 0.0 87/98(89%) 5/98(5%) +1/-1 
Query             4  TTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGGGCA  63
                     |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||| |
Subject   350862136  TTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGGGTA  350862077
Query            64  TTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | ||||||||||||||||||||||||||||||||||||
Subject   350862076  TCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  350862039

Range 19: 87296629 to 87296537 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
123.0 bits(135) 0.0 88/101(87%) 8/101(8%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| ||||    || |||||||||||||||||||||||||||||    ||||
Subject    87296629  TATTTGGTTATCTTTT----ACCTTGGCTATAAACCTTGGTCATATATATAT----TTGG  87296570
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject    87296569  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  87296529

Range 20: 43587829 to 43587924 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject    43587829  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  43587888
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | ||| |||||||||||||||||||||||| ||||||||||
Subject    43587889  GTATTGTGACCCGCCCGGTGGTAAACCGCCGGGGCGCTTTA  43587929

Range 21: 68838965 to 68839060 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| |||||||||||||||||||||||     ||||
Subject    68838965  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAG----TTGG  68839024
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject    68839025  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  68839065

Range 22: 138070925 to 138071020 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| |||||||||||||||||||||||     ||||
Subject   138070925  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAG----TTGG  138070984
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   138070985  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  138071025

Range 23: 190513625 to 190513530 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| |||||||||||||||||||||||| |    ||
Subject   190513625  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATATCT----GG  190513566
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   190513565  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  190513525

Range 24: 302149430 to 302149525 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| |||||||||||||||||||||||     ||||
Subject   302149430  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAG----TTGG  302149489
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   302149490  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  302149530

Range 25: 302899813 to 302899718 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/-1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   302899813  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  302899754
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||| ||||||||||||||||||||
Subject   302899753  GTATCATGACCCGCCCGGTGTTAAACCGCCAGGGCGCTTTA  302899713

Range 26: 319289017 to 319289112 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   319289017  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  319289076
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || |||| |||||||||||||||||||||||||||||||
Subject   319289077  GTATCATGAACCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  319289117

Range 27: 319294132 to 319294227 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   319294132  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  319294191
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || |||| |||||||||||||||||||||||||||||||
Subject   319294192  GTATCATGAACCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  319294232

Range 28: 319299246 to 319299341 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   319299246  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  319299305
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || |||| |||||||||||||||||||||||||||||||
Subject   319299306  GTATCATGAACCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  319299346

Range 29: 319304361 to 319304456 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| ||||||||||||||||||||||||    ||||
Subject   319304361  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCTTGGTCATATATATAT----TTGG  319304420
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || |||| |||||||||||||||||||||||||||||||
Subject   319304421  GTATCATGAACCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  319304461

Range 30: 337636021 to 337636116 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
120.3 bits(132) 0.0 88/101(87%) 5/101(5%) +1/+1 
Query             1  TAATTGGTTATATTTTTATAACTTTGGCTATAAACCTTGGTCATATATATATATATTTGG  60
                     || |||||||| |||| | ||| |||| |||||||| |||||||||||||||    ||||
Subject   337636021  TATTTGGTTATCTTTT-ACAACCTTGGTTATAAACCGTGGTCATATATATAT----TTGG  337636080
Query            61  GCATTATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  101
                     | || ||||||||||||||||||||||||||||||||||||
Subject   337636081  GTATCATGACCCGCCCGGTGGTAAACCGCCAGGGCGCTTTA  337636121

Nucleotide Sequence (101 letters)

Query number:60
Query ID:Query_60
Definition line:zxx-060
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4672.3 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19041838 to 19041938 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19041838  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGGGGTG  19041897
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19041898  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  19041938

Range 2: 271997824 to 271997924 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   271997824  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  271997883
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   271997884  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  271997924

Range 3: 28409787 to 28409887 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject    28409787  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  28409846
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    28409847  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  28409887

Range 4: 153205339 to 153205439 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   153205339  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  153205398
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   153205399  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  153205439

Range 5: 216236657 to 216236757 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   216236657  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  216236716
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   216236717  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  216236757

Range 6: 414313185 to 414313085 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   414313185  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  414313126
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   414313125  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  414313085

Range 7: 23419227 to 23419127 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject    23419227  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  23419168
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||||||||||||| || ||||||||||||
Subject    23419167  AGAAAATTTTACTTTCCGGTTTGCTTGACGGATTTTTGATG  23419127

Range 8: 207979560 to 207979660 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   207979560  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  207979619
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   207979620  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  207979660

Range 9: 248072304 to 248072204 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   248072304  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  248072245
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   248072244  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTTATG  248072204

Range 10: 392904059 to 392903959 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   392904059  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  392904000
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   392903999  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  392903959

Range 11: 393283969 to 393283869 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   393283969  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  393283910
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   393283909  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  393283869

Range 12: 444485476 to 444485576 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   444485476  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  444485535
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||| ||||||||| ||||||||||||
Subject   444485536  AGAAAATTTTACTTTCCGATTTGCTCGACGGATTTTTGATG  444485576

Range 13: 483689130 to 483689030 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   483689130  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  483689071
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||| ||
Subject   483689070  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGGTG  483689030

Range 14: 488101776 to 488101676 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   488101776  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  488101717
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||||||||||||| || ||||||||||||
Subject   488101716  AGAAAATTTTACTTTCCGGTTTGCTTGACGGATTTTTGATG  488101676

Range 15: 54992053 to 54992151 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 95/101(94%) 2/101(2%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||  ||||
Subject    54992053  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAG--GGTG  54992112
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    54992113  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  54992153

Range 16: 10308951 to 10308852 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject    10308951  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGG-GGTG  10308892
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    10308891  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  10308851

Range 17: 379549566 to 379549467 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 95/101(94%) 1/101(1%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   379549566  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGG-GGTG  379549507
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   379549506  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  379549466

Range 18: 43590377 to 43590477 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||| |||||||||| ||||| |||||||||||||| ||||||||| |||| ||||
Subject    43590377  GCGAGCCTTGTGCTGCTGCATCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  43590436
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject    43590437  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  43590477

Range 19: 128016934 to 128016834 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||  ||||
Subject   128016934  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGAGGGTG  128016875
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||||||||||||| || ||||||||||||
Subject   128016874  AGAAAATTTTACTTTCCGGTTTGCTTGACGGATTTTTGATG  128016834

Range 20: 130038827 to 130038927 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||| ||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   130038827  GCGAGCTTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  130038886
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||| ||||||||||||||||||||||
Subject   130038887  AGAAAATTTTACTTTCCGATTTGCTCGATGGATTTTTGATG  130038927

Range 21: 136995639 to 136995539 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||| ||||||| |||||||||||||| ||||||||| |||| ||||
Subject   136995639  GCGAGCCTCGTGCTGCTACGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  136995580
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||||||||||||| || ||||||||||||
Subject   136995579  AGAAAATTTTACTTTCCGGTTTGCTTGACGGATTTTTGATG  136995539

Range 22: 164733054 to 164732954 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||  |||||||||||||| ||||||||| |||| ||||
Subject   164733054  GCGAGCCTCGTGCTGCTGCGTCTTTAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  164732995
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||||| |||||||||| ||||||||||||
Subject   164732994  AGAAAATTTTACTTTCCAGTTTGCTCGACGGATTTTTGATG  164732954

Range 23: 188259408 to 188259308 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   188259408  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  188259349
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||| |||||||||||| ||||||||||||
Subject   188259348  AGAAAATTTTACTTTTCGGTTTGCTCGACGGATTTTTGATG  188259308

Range 24: 250075635 to 250075535 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||| ||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   250075635  GCGCGCCTCGTGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  250075576
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||| ||||||||||| ||||||||||||
Subject   250075575  AGAAAATTTTACTTTCTGGTTTGCTCGACGGATTTTTGATG  250075535

Range 25: 250394003 to 250393903 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||| ||||||||||||||| |||||||||||||| | ||||||| |||| ||||
Subject   250394003  GCGAGCCTCATGCTGCTGCGTCTTCAAAAGAAAGTTTGGGTCAAAGTAAGCAAGGGGGTG  250393944
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   250393943  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  250393903

Range 26: 279788138 to 279788238 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     ||||||||||||||||||||||||| |||| ||||||||| ||||||||| |||| ||||
Subject   279788138  GCGAGCCTCGTGCTGCTGCGTCTTCAAAAGGAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  279788197
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||||||||||||| || ||||||||||||
Subject   279788198  AGAAAATTTTACTTTCCGGTTTGCTTGACGGATTTTTGATG  279788238

Range 27: 335011146 to 335011046 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   335011146  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  335011087
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||| |||||||||||| ||||||||||||
Subject   335011086  AGAAAATTTTACTTTTCGGTTTGCTCGACGGATTTTTGATG  335011046

Range 28: 338003530 to 338003630 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||| |||||||||||| |||||||||||||| ||||||||| |||| ||||
Subject   338003530  GCGAGCCTCGTGTTGCTGCGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  338003589
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||| | ||||||||||||
Subject   338003590  AGAAAATTTTACTTTCCGGTTTGCTCAACGGATTTTTGATG  338003630

Range 29: 338238068 to 338237968 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||| |||||| |||||||||||||| ||||||||| |||| ||||
Subject   338238068  GCGAGCCTCGTGCTGCTGTGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  338238009
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     ||||||||||||||| |||||||||||| ||||||||||||
Subject   338238008  AGAAAATTTTACTTTGCGGTTTGCTCGACGGATTTTTGATG  338237968

Range 30: 377137601 to 377137701 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  GCGAGCCTCGTGCTGCTGCGTCTTCGAAAGAAAGTTTGGGCCCAAGTAAGTAAGGAGGTG  60
                     |||||||||||||||||  |||||| |||||||||||||| ||||||||| |||| ||||
Subject   377137601  GCGAGCCTCGTGCTGCTATGTCTTCAAAAGAAAGTTTGGGTCCAAGTAAGCAAGGGGGTG  377137660
Query            61  AGAAAATTTTACTTTCCGGTTTGCTCGATGGATTTTTGATG  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   377137661  AGAAAATTTTACTTTCCGGTTTGCTCGACGGATTTTTGATG  377137701

Nucleotide Sequence (101 letters)

Query number:61
Query ID:Query_61
Definition line:zxx-061
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5139.4 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19067456 to 19067556 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19067456  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  19067515
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19067516  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  19067556

Range 2: 47669336 to 47669436 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    47669336  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  47669395
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    47669396  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  47669436

Range 3: 88690006 to 88689906 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    88690006  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  88689947
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    88689946  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  88689906

Range 4: 121114213 to 121114313 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject   121114213  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  121114272
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   121114273  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  121114313

Range 5: 208401443 to 208401543 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   208401443  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  208401502
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   208401503  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  208401543

Range 6: 208412103 to 208412203 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   208412103  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  208412162
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   208412163  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  208412203

Range 7: 396800699 to 396800599 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   396800699  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  396800640
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   396800639  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  396800599

Range 8: 489679240 to 489679340 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   489679240  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  489679299
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   489679300  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  489679340

Range 9: 109237897 to 109237799 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
170.8 bits(188) 0.0 97/99(98%) 0/99(0%) +1/-1 
Query             3  TCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGATAA  62
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject   109237897  TCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGATAA  109237838
Query            63  AAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||
Subject   109237837  AAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  109237799

Range 10: 438289299 to 438289201 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
170.8 bits(188) 0.0 97/99(98%) 0/99(0%) +1/-1 
Query             3  TCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGATAA  62
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Subject   438289299  TCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGATAA  438289240
Query            63  AAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||
Subject   438289239  AAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  438289201

Range 11: 17007189 to 17007089 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    17007189  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  17007130
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject    17007129  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  17007089

Range 12: 36655671 to 36655771 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    36655671  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  36655730
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject    36655731  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  36655771

Range 13: 44990261 to 44990361 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    44990261  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  44990320
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject    44990321  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  44990361

Range 14: 48667368 to 48667468 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    48667368  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  48667427
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject    48667428  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  48667468

Range 15: 64718506 to 64718606 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||
Subject    64718506  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTTGGTCATGCGGAT  64718565
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    64718566  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  64718606

Range 16: 91160289 to 91160389 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject    91160289  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  91160348
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject    91160349  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  91160389

Range 17: 111309034 to 111308934 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   111309034  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  111308975
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   111308974  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  111308934

Range 18: 118014992 to 118015092 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   118014992  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  118015051
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     | |||||||||||||||||||||||||||||||||||||||
Subject   118015052  AGAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  118015092

Range 19: 139308118 to 139308218 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   139308118  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  139308177
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   139308178  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  139308218

Range 20: 302606660 to 302606560 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   302606660  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  302606601
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     ||||||||||||| |||||||||||||||||||||||||||
Subject   302606600  AAAAGCCTTCTTCGATGATTCTCCAAAGGTTAGTGTTCACA  302606560

Range 21: 307750701 to 307750801 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||
Subject   307750701  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCAGTCATGCGGAT  307750760
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   307750761  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  307750801

Range 22: 329142322 to 329142222 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   329142322  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  329142263
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   329142262  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  329142222

Range 23: 348462626 to 348462726 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   348462626  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  348462685
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   348462686  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  348462726

Range 24: 348473647 to 348473747 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   348473647  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  348473706
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   348473707  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  348473747

Range 25: 382091034 to 382091134 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   382091034  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  382091093
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   382091094  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  382091134

Range 26: 397081295 to 397081395 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Subject   397081295  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTGCTTCGGTCATGCGGAT  397081354
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   397081355  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  397081395

Range 27: 412274731 to 412274831 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   412274731  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  412274790
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   412274791  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  412274831

Range 28: 421838101 to 421838001 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   421838101  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  421838042
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||||||||||||||||||||||||||| ||||||||||||
Subject   421838041  AAAAGCCTTCTTCAATGATTCTCCAAAGTTTAGTGTTCACA  421838001

Range 29: 429468860 to 429468760 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   429468860  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  429468801
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   429468800  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  429468760

Range 30: 437863997 to 437863897 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  TCTCATTGAATTGATGTTCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGTGGAT  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   437863997  TCTCATTGAATTGATGATCCACAACTTCTCTAGGAGTGAAGTTACTTCGGTCATGCGGAT  437863938
Query            61  AAAAGCCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  101
                     |||| ||||||||||||||||||||||||||||||||||||
Subject   437863937  AAAAACCTTCTTCAATGATTCTCCAAAGGTTAGTGTTCACA  437863897

Nucleotide Sequence (101 letters)

Query number:62
Query ID:Query_62
Definition line:zxx-062
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5244.0 101% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 208403247 to 208403347 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   208403247  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  208403306
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   208403307  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  208403347

Range 2: 19069222 to 19069322 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19069222  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCACTGG  19069281
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19069282  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  19069322

Range 3: 47671138 to 47671238 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    47671138  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  47671197
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    47671198  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  47671238

Range 4: 186561772 to 186561872 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   186561772  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  186561831
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   186561832  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  186561872

Range 5: 186572422 to 186572522 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   186572422  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  186572481
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   186572482  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  186572522

Range 6: 208413907 to 208414007 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Subject   208413907  GTACTACCGCTTGTAGCATCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  208413966
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   208413967  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  208414007

Range 7: 234803583 to 234803483 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   234803583  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  234803524
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   234803523  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  234803483

Range 8: 234814221 to 234814121 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   234814221  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  234814162
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   234814161  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  234814121

Range 9: 296780893 to 296780993 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Subject   296780893  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCTGCGGTACTACCGCTGG  296780952
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   296780953  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  296780993

Range 10: 307487570 to 307487670 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Subject   307487570  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCTGCGGTACTACCGCTGG  307487629
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   307487630  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  307487670

Range 11: 421836299 to 421836199 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   421836299  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  421836240
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   421836239  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  421836199

Range 12: 438287521 to 438287421 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Subject   438287521  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCCGGCCCGCGGTACTACCGCTGG  438287462
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   438287461  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  438287421

Range 13: 469062564 to 469062664 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Subject   469062564  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCAGG  469062623
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   469062624  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  469062664

Range 14: 163545926 to 163545826 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject   163545926  GTACTACCGCTTGTAGAACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  163545867
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   163545866  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  163545826

Range 15: 165885406 to 165885506 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Subject   165885406  GTACTACCGCTTGTACCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  165885465
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   165885466  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  165885506

Range 16: 296770762 to 296770862 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Subject   296770762  GTACTACCGCTTGTAGCACCCTAGCGGTACTACCGCTCTGGCCTGCGGTACTACCGCTGG  296770821
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   296770822  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  296770862

Range 17: 397083095 to 397083195 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Subject   397083095  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCTCGCGGTACTACCGCTGG  397083154
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   397083155  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  397083195

Range 18: 489670403 to 489670503 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Subject   489670403  GTACTACCGCTTGTAGCGCCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  489670462
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   489670463  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  489670503

Range 19: 498542393 to 498542493 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Subject   498542393  GTACTACCGCTTGTACCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  498542452
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   498542453  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  498542493

Range 20: 47660912 to 47661012 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Subject    47660912  GTACTACCGCTTGTAGCACCCAAGCAGTACTACCGCTCTGGCCCGCGATACTACCGCTGG  47660971
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    47660972  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  47661012

Range 21: 118016790 to 118016890 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   118016790  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  118016849
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     ||||||||||||||||| |||| ||||| ||||||||||||
Subject   118016850  GACCAGAGAGGGCACAATGAGAAGAGAAACAAGCCCATCAT  118016890

Range 22: 304781192 to 304781292 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   304781192  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  304781251
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     ||||||||||||||||| |||| ||||| ||||||||||||
Subject   304781252  GACCAGAGAGGGCACAATGAGAAGAGAAACAAGCCCATCAT  304781292

Range 23: 304803183 to 304803283 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   304803183  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  304803242
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     ||||||||||||||||| |||| ||||| ||||||||||||
Subject   304803243  GACCAGAGAGGGCACAATGAGAAGAGAAACAAGCCCATCAT  304803283

Range 24: 396809560 to 396809460 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Subject   396809560  GTACTACCGCTTGTACCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  396809501
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     || ||||||||||||||||| ||||||||||||||||||||
Subject   396809500  GATCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  396809460

Range 25: 397067143 to 397067243 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Subject   397067143  GTACTACCACTTGTAGCACCCAAACGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  397067202
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   397067203  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  397067243

Range 26: 421846944 to 421846844 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   421846944  GTAGTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  421846885
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| |||||||| |||||||||||
Subject   421846884  GACCAGAGAGGGCACAAAGAAAGGAGAACGAAGCCCATCAT  421846844

Range 27: 438298082 to 438297982 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     |||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||
Subject   438298082  GTACTACCGCCTGTAGCACCCAAGCGGTACTACCGCTCCGGCCCGCCGTACTACCGCTGG  438298023
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   438298022  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  438297982

Range 28: 489681040 to 489681140 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Subject   489681040  GTACTACCGCTTGTAGCGCCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCACTGG  489681099
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   489681100  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  489681140

Range 29: 498531729 to 498531829 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Subject   498531729  GTACTATCGCTTGTACCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  498531788
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAACCAAGCCCATCAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   498531789  GACCAGAGAGGGCACAAAGAAAGGAGAACCAAGCCCATCAT  498531829

Range 30: 27692276 to 27692175 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 99/102(97%) 1/102(1%) +1/-1 
Query             1  GTACTACCGCTTGTAGCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  60
                     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Subject    27692276  GTACTACCGCTTGTACCACCCAAGCGGTACTACCGCTCTGGCCCGCGGTACTACCGCTGG  27692217
Query            61  GACCAGAGAGGGCACAAAGAGAGGAGAA-CCAAGCCCATCAT  102
                     |||||||||||||||||||| ||||||| |||||||||||||
Subject    27692216  GACCAGAGAGGGCACAAAGAAAGGAGAATCCAAGCCCATCAT  27692175

Nucleotide Sequence (101 letters)

Query number:63
Query ID:Query_63
Definition line:zxx-063
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
177.1 4205.3 106% 3.335e-43 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19075210 to 19075309 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             2  GGGGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTG  61
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject    19075210  GGGGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCATGCGTG  19075269
Query            62  CCCTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    19075270  CCCTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  19075309

Range 2: 343049372 to 343049468 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 95/100(95%) 3/100(3%) +1/+1 
Query             2  GGGGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTG  61
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   343049372  GGGGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTG  343049431
Query            62  CCCTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||||||| |||||||   ||| ||||||||||||||||||
Subject   343049432  CCCTGGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  343049471

Range 3: 337428130 to 337428035 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
146.5 bits(161) 0.0 92/99(93%) 3/99(3%) +1/-1 
Query             3  GGGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGC  62
                     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Subject   337428130  GGGGGGGGTGCTCCGAGGGGGGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGC  337428071
Query            63  CCTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||||| |||||||   ||| ||||||||||||||||||
Subject   337428070  CCTGGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  337428032

Range 4: 290066791 to 290066884 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
142.9 bits(157) 0.0 90/97(93%) 3/97(3%) +1/+1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   290066791  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCC  290066850
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||||  ||||||   ||| ||||||||||||||||||
Subject   290066851  TGGTGCGTTGTG---CCCACCTCGGGTGCCCCCGGAC  290066887

Range 5: 378576770 to 378576675 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.9 bits(156) 0.0 91/99(92%) 3/99(3%) +1/-1 
Query             3  GGGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGC  62
                     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |
Subject   378576770  GGGGGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCAC  378576711
Query            63  CCTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||||| |||||||   ||| ||||||||||||||||||
Subject   378576710  CCTGGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  378576672

Range 6: 292888579 to 292888671 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.0 bits(155) 0.0 89/96(93%) 3/96(3%) +1/+1 
Query             6  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCCT  65
                     ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Subject   292888579  GGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCCT  292888638
Query            66  GGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||| |||||||   ||| ||||||||||||||||||
Subject   292888639  GGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  292888674

Range 7: 301381622 to 301381714 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.0 bits(155) 0.0 89/96(93%) 3/96(3%) +1/+1 
Query             6  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCCT  65
                     ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Subject   301381622  GGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCCT  301381681
Query            66  GGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||| |||||||   ||| ||||||||||||||||||
Subject   301381682  GGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  301381717

Range 8: 119491278 to 119491182 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 91/100(91%) 3/100(3%) +1/-1 
Query             2  GGGGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTG  61
                     |||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| |
Subject   119491278  GGGGGGGGGTGCCCCGAGGGGGGCACAACCCACCAGGGCGTGCCAGGAGGCCCAGGCGCG  119491219
Query            62  CCCTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||||||| |||||||   ||| ||||||||||||||||||
Subject   119491218  CCCTGGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  119491179

Range 9: 334600358 to 334600265 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 90/97(93%) 4/97(4%) +1/-1 
Query             6  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCCT  65
                     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Subject   334600358  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAAGAGGCCCAGGCGTGCCCT  334600299
Query            66  GGTAGGTTGTGGCCCCCCCCTCGGGTG-CCCCCGGAC  102
                     ||| |||||||   ||| ||||||||| |||||||||
Subject   334600298  GGTGGGTTGTG---CCCACCTCGGGTGCCCCCCGGAC  334600262

Range 10: 36336437 to 36336530 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 89/97(92%) 3/97(3%) +1/+1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject    36336437  GGGGGGTGCTCCGAGGGGAGCACAACCTACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCC  36336496
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||| |||||||   ||| |||||||||||||| |||
Subject    36336497  TGGTGGGTTGTG---CCCACCTCGGGTGCCCCCAGAC  36336533

Range 11: 194084081 to 194084174 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 89/97(92%) 3/97(3%) +1/+1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||
Subject   194084081  GGGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCACGCCAGGAGGCCCAGGCGCGCCC  194084140
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||| |||||||   ||| ||||||||||||||||||
Subject   194084141  TGGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  194084177

Range 12: 198268462 to 198268369 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 89/97(92%) 3/97(3%) +1/-1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   198268462  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCC  198268403
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||| |||||||   ||| | | ||||||||||||||
Subject   198268402  TGGTGGGTTGTG---CCCACTTTGGGTGCCCCCGGAC  198268366

Range 13: 237926571 to 237926476 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/99(92%) 4/99(4%) +1/-1 
Query             4  GGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCC  63
                     ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Subject   237926571  GGGGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCC  237926512
Query            64  CTGGTAGGTTGTGGCCCCCCCCTCGGGTG-CCCCCGGAC  102
                     ||||| |||||||   ||| ||||||||| |||||||||
Subject   237926511  CTGGTGGGTTGTG---CCCACCTCGGGTGCCCCCCGGAC  237926473

Range 14: 353565645 to 353565738 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 89/97(92%) 3/97(3%) +1/+1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||
Subject   353565645  GGGGGGTGCTCCGACGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGAGCGCCC  353565704
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||| ||||||    ||||||||||||||||||||||
Subject   353565705  TGGTGGGTTGT---ACCCCCCTCGGGTGCCCCCGGAC  353565741

Range 15: 401288950 to 401288857 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 89/97(92%) 3/97(3%) +1/-1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   401288950  GGGGGGTGCCCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCC  401288891
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||| |||||||   ||  ||||||||||||||||||
Subject   401288890  TGGTGGGTTGTG---CCTACCTCGGGTGCCCCCGGAC  401288854

Range 16: 424361972 to 424362065 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 89/97(92%) 3/97(3%) +1/+1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||
Subject   424361972  GGGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGTGCCAGGAGGCCCAGGCGCGCCC  424362031
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||| |||||||   ||| ||||||||||||||||||
Subject   424362032  TGGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  424362068

Range 17: 487890752 to 487890659 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 89/97(92%) 3/97(3%) +1/-1 
Query             4  GGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCC  63
                     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Subject   487890752  GGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCTAGGCGTGCC  487890693
Query            64  CTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGA  100
                     ||||| |||||||   ||| ||||||||||| | |||
Subject   487890692  CTGGTGGGTTGTG---CCCTCCTCGGGTGCCACAGGA  487890656

Range 18: 111937224 to 111937130 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 90/98(92%) 4/98(4%) +1/-1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   111937224  GGGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCC  111937165
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTG-CCCCCGGAC  102
                     |||| |||||||   ||| ||||||||| |||||||||
Subject   111937164  TGGTGGGTTGTG---CCCACCTCGGGTGCCCCCCGGAC  111937127

Range 19: 134759054 to 134758962 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 88/96(92%) 3/96(3%) +1/-1 
Query             6  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCCT  65
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject   134759054  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCCT  134758995
Query            66  GGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||| ||||||    ||| |||| |||||||||||||
Subject   134758994  GGTGGGTTGT---ACCCACCTCAGGTGCCCCCGGAC  134758959

Range 20: 164774729 to 164774635 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 90/98(92%) 4/98(4%) +1/-1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject   164774729  GGGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  164774670
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTG-CCCCCGGAC  102
                     |||| |||||||   ||| ||| ||||| |||||||||
Subject   164774669  TGGTGGGTTGTG---CCCACCTTGGGTGCCCCCCGGAC  164774632

Range 21: 182415245 to 182415151 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 90/98(92%) 4/98(4%) +1/-1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Subject   182415245  GGGGGGTGCTCCGAGGGGAGCACAACCCACTAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  182415186
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCC-CGGAC  102
                     |||| |||||||   ||| |||||||| |||| |||||
Subject   182415185  TGGTGGGTTGTG---CCCACCTCGGGTACCCCACGGAC  182415148

Range 22: 231343558 to 231343655 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 91/101(90%) 3/101(3%) +1/+1 
Query             1  TGGGGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGT  60
                     |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || 
Subject   231343558  TGGGGGGGGGTGCTCCGAGGGGAGCACAACCCACTAGGGCGCGCTAGGAGGCCCAGACGC  231343617
Query            61  GCCCTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     |||||||| |||||||   ||| |||| |||||||||||||
Subject   231343618  GCCCTGGTGGGTTGTG---CCCACCTCAGGTGCCCCCGGAC  231343658

Range 23: 357326565 to 357326473 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 88/96(92%) 3/96(3%) +1/-1 
Query             4  GGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCC  63
                     |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||
Subject   357326565  GGGGGGGTGCCCCGAGGGGGGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCC  357326506
Query            64  CTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGG  99
                     ||||| |||||||   ||| ||||||||||||||||
Subject   357326505  CTGGTGGGTTGTG---CCCACCTCGGGTGCCCCCGG  357326470

Range 24: 384682856 to 384682764 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 88/96(92%) 3/96(3%) +1/-1 
Query             6  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCCT  65
                     ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||
Subject   384682856  GGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCACGCCAGGAGGCCCAGGCGCGCCCT  384682797
Query            66  GGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||| |||||||   ||| ||||||||||||||||||
Subject   384682796  GGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  384682761

Range 25: 386185327 to 386185419 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 88/96(92%) 3/96(3%) +1/+1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Subject   386185327  GGGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCC  386185386
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGA  100
                     |||| |||||||   ||| |||||||||||||| ||
Subject   386185387  TGGTGGGTTGTG---CCCACCTCGGGTGCCCCCCGA  386185422

Range 26: 388144560 to 388144652 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 88/96(92%) 3/96(3%) +1/+1 
Query             6  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCCT  65
                     ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||
Subject   388144560  GGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCAAGGAGGCCCAGGCGCGCCCT  388144619
Query            66  GGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||| |||||||   ||| ||||||||||||||||||
Subject   388144620  GGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  388144655

Range 27: 404088870 to 404088958 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 87/93(94%) 4/93(4%) +1/+1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Subject   404088870  GGGGGGTGCTCCGAGGG-AGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  404088929
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCC  97
                     |||| |||||||   ||| ||||||||||||||
Subject   404088930  TGGTGGGTTGTG---CCCACCTCGGGTGCCCCC  404088962

Range 28: 472990000 to 472989908 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
136.5 bits(150) 0.0 88/96(92%) 3/96(3%) +1/-1 
Query             5  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCC  64
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   472990000  GGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCTAGGCGCGCCC  472989941
Query            65  TGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGA  100
                     |||| |||||||   ||| |||||||||||||| ||
Subject   472989940  TGGTGGGTTGTG---CCCACCTCGGGTGCCCCCTGA  472989905

Range 29: 469997123 to 469997029 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
135.6 bits(149) 0.0 89/98(91%) 3/98(3%) +1/-1 
Query             4  GGGGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCC  63
                     |||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||||
Subject   469997123  GGGGGGGTGCCCCAAGGGAGGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCC  469997064
Query            64  CTGGTAGGTTGTGGCCCCCCCCTCGGGTGCCCCCGGAC  101
                     ||||| |||||||   ||| ||||||||||||||||||
Subject   469997063  CTGGTGGGTTGTG---CCCACCTCGGGTGCCCCCGGAC  469997026

Range 30: 60047682 to 60047775 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
134.7 bits(148) 0.0 89/97(92%) 4/97(4%) +1/+1 
Query             6  GGGGGTGCTCCGAGGGGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGTGCCCT  65
                     ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Subject    60047682  GGGGGTGCTCCGAGGAGAGCACAACCCACCAGGGCGCGCCAGGAGGCCCAGGCGCGCCCT  60047741
Query            66  GGTAGGTTGTGGCCCCCCCCTCGGGTG-CCCCCGGAC  102
                     ||| |||||||   ||| ||||||||| |||||||||
Subject    60047742  GGTGGGTTGTG---CCCACCTCGGGTGCCCCCCGGAC  60047778

Nucleotide Sequence (101 letters)

Query number:64
Query ID:Query_64
Definition line:zxx-064
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4872.5 105% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19076148 to 19076248 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19076148  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  19076207
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19076208  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  19076248

Range 2: 162481637 to 162481737 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   162481637  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  162481696
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject   162481697  GCTTTTATTTTCAGATCTATTAAACTAAAAATACAAAAATA  162481737

Range 3: 249951640 to 249951540 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   249951640  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  249951581
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject   249951580  GCTTTTATTTTCAGATCTATTAAACTAAAAATACAAAAATA  249951540

Range 4: 60053659 to 60053759 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    60053659  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  60053718
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject    60053719  GCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  60053759

Range 5: 187103897 to 187103797 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   187103897  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  187103838
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject   187103837  GCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  187103797

Range 6: 215569873 to 215569973 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Subject   215569873  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGGTCTATTTTCCTTT  215569932
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject   215569933  GCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  215569973

Range 7: 281409108 to 281409008 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   281409108  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  281409049
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject   281409048  GCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  281409008

Range 8: 292436220 to 292436120 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Subject   292436220  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCATT  292436161
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||| ||||||| |||||| ||||||||
Subject   292436160  GCTTTTATTTTCAGATCCATTAAACCAAAAATACAAAAATA  292436120

Range 9: 303883929 to 303883829 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   303883929  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  303883870
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject   303883869  GCTTTTATTTTCAGATCTATTAAACAAAAAATACAAAAATA  303883829

Range 10: 386139426 to 386139526 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   386139426  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  386139485
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||| |||||||||||| ||||||||
Subject   386139486  GCTTTTATTTTCAGATCTACTAAACTAAAAATACAAAAATA  386139526

Range 11: 429484135 to 429484035 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   429484135  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  429484076
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     |||||||||||||||||||||||||||||||| | ||||||
Subject   429484075  GCTTTTATTTTCAGATCTATTAAACTAAAAATACTAAAATA  429484035

Range 12: 40369486 to 40369586 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| |||||||||||||||||||||||||||||||||||||||||||||||   ||
Subject    40369486  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCTCTT  40369545
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     || ||||||||||||||||||||||||||||||||||||||
Subject    40369546  GCATTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  40369586

Range 13: 134758122 to 134758022 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Subject   134758122  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCTATCTATTTTCCTTT  134758063
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject   134758062  GCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  134758022

Range 14: 182412781 to 182412681 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Subject   182412781  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTTCCTTTGCGATCTATTTTCCTTT  182412722
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject   182412721  GCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  182412681

Range 15: 194160597 to 194160697 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   194160597  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  194160656
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||| ||||| |||||| ||||||||
Subject   194160657  GCTTTTATTTTCAGATCTACTAAACCAAAAATACAAAAATA  194160697

Range 16: 224937194 to 224937094 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||
Subject   224937194  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGGTCTATTTTCCTTT  224937135
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject   224937134  GCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  224937094

Range 17: 238437487 to 238437387 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||  |||||||||||| |||||||||||||||||||||||||||||||||| ||||
Subject   238437487  AAACCTTCGGCCCCCGGGTCGCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  238437428
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     |||||||||||||||||||||||||||||||| ||||||||
Subject   238437427  GCTTTTATTTTCAGATCTATTAAACTAAAAATACAAAAATA  238437387

Range 18: 249945263 to 249945163 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   249945263  AAACCTACGACCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  249945204
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     |||||||||||||||||||||||||| ||||| ||||||||
Subject   249945203  GCTTTTATTTTCAGATCTATTAAACTTAAAATACAAAAATA  249945163

Range 19: 281231834 to 281231734 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Subject   281231834  AAACCTATGGCCCCCGGGCCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  281231775
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     | ||||||||||||||||||||||| |||||| ||||||||
Subject   281231774  GTTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  281231734

Range 20: 302444082 to 302444182 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   302444082  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  302444141
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                      |||||||||||||||||||||||| |||||| ||||||||
Subject   302444142  TCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  302444182

Range 21: 4640369 to 4640268 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTA-TTTTTCTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||
Subject     4640369  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTACTTTTCCTT  4640310
Query            61  TGCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  102
                     |||||||||||||||||||||||||| |||||| ||||||||
Subject     4640309  TGCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  4640268

Range 22: 102214783 to 102214684 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Subject   102214783  AAACCTACGGCCCCCAGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  102214724
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAAT  100
                     ||||||||||||| |||||||||||||||||| |||||||
Subject   102214723  GCTTTTATTTTCATATCTATTAAACTAAAAATACAAAAAT  102214684

Range 23: 131101245 to 131101144 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTA-TTTTTCTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||
Subject   131101245  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTACTTTTCCTT  131101186
Query            61  TGCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  102
                     |||||||||||||||||||||||||| |||||| ||||||||
Subject   131101185  TGCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  131101144

Range 24: 134208488 to 134208387 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTA-TTTTTCTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||
Subject   134208488  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTACTTTTCCTT  134208429
Query            61  TGCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  102
                     ||||||||||||| ||||||||||||||||||| ||||||||
Subject   134208428  TGCTTTTATTTTCTGATCTATTAAACTAAAAATACAAAAATA  134208387

Range 25: 181467346 to 181467245 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTA-TTTTTCTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||
Subject   181467346  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTACTTTTCCTT  181467287
Query            61  TGCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  102
                     |||||||||||||||||||||||||| |||||| ||||||||
Subject   181467286  TGCTTTTATTTTCAGATCTATTAAACAAAAAATACAAAAATA  181467245

Range 26: 404089807 to 404089908 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTT-CTT  60
                     ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||
Subject   404089807  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATGTATTTTTCCTT  404089866
Query            61  TGCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  102
                     |||||||||||||||||||||||||| |||||| ||||||||
Subject   404089867  TGCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  404089908

Range 27: 162476474 to 162476572 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             3  ACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTTGC  62
                     ||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||||||
Subject   162476474  ACCTACGGCCCCGGGGTCTCTTTCTCATATTATTTGCCATTGCGATCTATTTTCCTTTGC  162476533
Query            63  TTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     |||||||||||||||||||||||||||||| ||||||||
Subject   162476534  TTTTATTTTCAGATCTATTAAACTAAAAATACAAAAATA  162476572

Range 28: 302417068 to 302417167 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 96/101(95%) 1/101(1%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   302417068  AAACCTACGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  302417127
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     |||||||||||||||||||||||||  ||||| ||||||||
Subject   302417128  GCTTTTATTTTCAGATCTATTAAAC-CAAAATACAAAAATA  302417168

Range 29: 328280209 to 328280111 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/-1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   328280209  AAACCTACGACCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTCCTTT  328280150
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAA  99
                     ||||||||||||||||||||||||||||||||  |||||
Subject   328280149  GCTTTTATTTTCAGATCTATTAAACTAAAAATAAAAAAA  328280111

Range 30: 60048554 to 60048654 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  AAACCTATGGCCCCCGGGTCTCTTTCTCATATTATTTGCCTTTGCGATCTATTTTTCTTT  60
                     ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||
Subject    60048554  AAACCTATGACCCCCGGGTCTCTTTCAAATATTATTTGCCTTTGCGATCTATTTTCCTTT  60048613
Query            61  GCTTTTATTTTCAGATCTATTAAACTAAAAATGCAAAAATA  101
                     ||||||||||||||||||||||||| |||||| ||||||||
Subject    60048614  GCTTTTATTTTCAGATCTATTAAACCAAAAATACAAAAATA  60048654

Nucleotide Sequence (101 letters)

Query number:65
Query ID:Query_65
Definition line:zxx-065
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
174.4 4666.0 100% 1.164e-42 98% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19104166 to 19104266 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19104166  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCGGAAA  19104225
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| ||||||||||||||||||||||||||||||||
Subject    19104226  TGTTGAGCGTTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  19104266

Range 2: 146971852 to 146971952 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Subject   146971852  TTACGCTTCTCTTAAGCTCAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  146971911
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| ||||||||| ||||||||||||||||||||||
Subject   146971912  TGTTGAGCGTTCCTTGCGCGCGGAAGAACGTGTGGCGGCTT  146971952

Range 3: 159022808 to 159022708 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   159022808  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  159022749
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| ||||||||| ||||||||||||||||||||||
Subject   159022748  TGTTGAGCGTTCCTTGCGCGCGGAAGAACGTGTGGCGGCTT  159022708

Range 4: 133300160 to 133300060 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Subject   133300160  TTACTCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAACGGAAA  133300101
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| ||||||||| ||||||||||||||||||||||
Subject   133300100  TGTTGAGCGTTCCTTGCGCGCGGAAGAACGTGTGGCGGCTT  133300060

Range 5: 180694134 to 180694034 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   180694134  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  180694075
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||| ||| ||||||||| ||||||||||||||||||||||
Subject   180694074  TGTTCAGCGTTCCTTGCGCGCGGAAGAACGTGTGGCGGCTT  180694034

Range 6: 192460874 to 192460774 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||
Subject   192460874  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACATGGCATCATCACAGTTAGCGGAAA  192460815
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| |||||||||||||||||||||||||
Subject   192460814  TGTTGAGCGTTCCTTACGTGCGGAAGAACGTGTGGCGGCTT  192460774

Range 7: 238879221 to 238879121 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   238879221  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  238879162
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| |||||||||||||| ||||||||||
Subject   238879161  TGTTGAGCGTTCCTTACGTGCGGAAGAACGCGTGGCGGCTT  238879121

Range 8: 423692553 to 423692653 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   423692553  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  423692612
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || ||||||||||||||||||||||
Subject   423692613  TGTTGAGCGTTCCTTACGCGCGGAAGAACGTGTGGCGGCTT  423692653

Range 9: 190492352 to 190492253 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   190492352  TTATGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  190492293
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCT  100
                     |||||||| |||||| ||||||||||||||||||||||||
Subject   190492292  TGTTGAGCGTTCCTTACGTGCGGAAGAACGTGTGGCGGCT  190492253

Range 10: 165505086 to 165505186 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||
Subject   165505086  TTACGCTTCTCTTAAGCTTAAGAAGCCCGGTCCATGTGGCATCATCACAGTTAGCAGAAA  165505145
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| |||||||| ||||||||||||||||
Subject   165505146  TGTTGAGCGTTCCTTACGTGCGGAGGAACGTGTGGCGGCTT  165505186

Range 11: 173606950 to 173607050 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   173606950  TTACGCTTATCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  173607009
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || ||||||||||||||||||||||
Subject   173607010  TGTTGAGCGTTCCTTACGCGCGGAAGAACGTGTGGCGGCTT  173607050

Range 12: 430690652 to 430690552 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   430690652  TTACGCTTCTCTCAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  430690593
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || ||||||||||||||||||||||
Subject   430690592  TGTTGAGCGTTCCTTACGCGCGGAAGAACGTGTGGCGGCTT  430690552

Range 13: 417852720 to 417852622 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject   417852720  TTACGCTTCCCTTAAGCTTAAGATGCCCTGTCCACGTGGCATCATCACAATTAGCGGAAA  417852661
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGC  99
                     | |||||| ||||||||| ||||||||||||||||||||
Subject   417852660  TATTGAGCGTTCCTTGCGCGCGGAAGAACGTGTGGCGGC  417852622

Range 14: 104896209 to 104896109 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||
Subject   104896209  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCATAGTTAGCGGAAA  104896150
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || ||||| ||||||||||||||||
Subject   104896149  TGTTGAGCGTTCCTTACGCGCGGAGGAACGTGTGGCGGCTT  104896109

Range 15: 120282298 to 120282198 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject   120282298  TTACGCTTCTCTTAAGCTTAAGATGCCCAGTCCACGTGGCATCATCACAATTAGCGGAAA  120282239
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     | | |||| |||||| || ||||||||||||||||||||||
Subject   120282238  TATCGAGCGTTCCTTACGCGCGGAAGAACGTGTGGCGGCTT  120282198

Range 16: 165814613 to 165814513 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Subject   165814613  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCATGTGGCATCATCACAGTTAGCAGAAA  165814554
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||| | |||||| || ||||| ||||||||||||||||
Subject   165814553  TGTTGATCGTTCCTTACGCGCGGAGGAACGTGTGGCGGCTT  165814513

Range 17: 180729839 to 180729939 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Subject   180729839  TTACGCTTCTCTTAAGCTTAAGATGCCCCGTCCACGTGGCATCATCACAGTTAGCAGAAA  180729898
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     | |||||| |||||| || |||||||||| |||||||||||
Subject   180729899  TATTGAGCGTTCCTTACGCGCGGAAGAACATGTGGCGGCTT  180729939

Range 18: 218252564 to 218252664 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  |||
Subject   218252564  TTACGCTTCTCTTAAGCTTAAGATGCCCGTTCCACGTGGCATCATCACAGTTAGCGAAAA  218252623
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| |||||||||||||| ||||||||||
Subject   218252624  TGTTGAGCGTTCCTTACGTGCGGAAGAACGCGTGGCGGCTT  218252664

Range 19: 232467410 to 232467310 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||
Subject   232467410  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCCCGCGGCATCATCACAGTTAGCAGAAA  232467351
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     | |||||| |||||| || ||||||||||||||||||||||
Subject   232467350  TATTGAGCGTTCCTTACGCGCGGAAGAACGTGTGGCGGCTT  232467310

Range 20: 254531834 to 254531934 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||
Subject   254531834  TTACGCTTCTCTTAAGCTTAAGATGCCCGATCCACGTGGCATCATCACAGTTAGCGGAAA  254531893
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| | |||| |||||||||||||| ||||||||||
Subject   254531894  TGTTGAGCGTCCCTTACGTGCGGAAGAACGCGTGGCGGCTT  254531934

Range 21: 256434476 to 256434576 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   256434476  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  256434535
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |   ||||||||||| || ||||||||||||||||||||||
Subject   256434536  TACAGAGCATTCCTTACGCGCGGAAGAACGTGTGGCGGCTT  256434576

Range 22: 333336172 to 333336072 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||
Subject   333336172  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATTACATTTAGCGGAAA  333336113
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || ||||||||| ||||||||||||
Subject   333336112  TGTTGAGCGTTCCTTACGCGCGGAAGAAGGTGTGGCGGCTT  333336072

Range 23: 343343679 to 343343579 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   343343679  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  343343620
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     | |||||| |||||| || ||||||||| ||||||||||||
Subject   343343619  TATTGAGCGTTCCTTACGCGCGGAAGAAGGTGTGGCGGCTT  343343579

Range 24: 367171566 to 367171666 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||
Subject   367171566  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTTCACGTGGCATCATCACAGTTAGCGGAAA  367171625
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || ||||| ||||||||||||||||
Subject   367171626  TGTTGAGCGTTCCTTACGCGCGGAGGAACGTGTGGCGGCTT  367171666

Range 25: 369529826 to 369529726 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Subject   369529826  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAA  369529767
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || | ||| ||||||||||||||||
Subject   369529766  TGTTGAGCGTTCCTTACGCGTGGAGGAACGTGTGGCGGCTT  369529726

Range 26: 417154503 to 417154403 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||
Subject   417154503  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCATAGTTAGCGGAAA  417154444
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || ||||| ||||||||||||||||
Subject   417154443  TGTTGAGCGTTCCTTACGCGCGGAGGAACGTGTGGCGGCTT  417154403

Range 27: 458170545 to 458170445 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||
Subject   458170545  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATTACAGTTAGCGGAAA  458170486
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || |||||||| |||||||||||||
Subject   458170485  TGTTGAGCGTTCCTTACGCGCGGAAGAGCGTGTGGCGGCTT  458170445

Range 28: 283064272 to 283064173 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 93/100(93%) 0/100(0%) +1/-1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Subject   283064272  TTATGCTTCTCTTAAGCTTAAGATGCCCGGTCCACATGGCATCATCACAGTTAGCAGAAA  283064213
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCT  100
                     |||||||| |||||| || |||||||||||||||| ||||
Subject   283064212  TGTTGAGCGTTCCTTACGCGCGGAAGAACGTGTGGGGGCT  283064173

Range 29: 73132794 to 73132894 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||| |||||||||||||||||| |||||||||||||||||| ||||| ||||
Subject    73132794  TTACGCTTCTCCTAAGCTTAAGATGCCCGGCCCACGTGGCATCATCACAGTTAGCGGAAA  73132853
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     |||||||| |||||| || |||||||||||||| |||||||
Subject    73132854  TGTTGAGCGTTCCTTACGCGCGGAAGAACGTGTTGCGGCTT  73132894

Range 30: 82253116 to 82253216 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Subject    82253116  TTACGCTTCTCTTAAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGTGGAAA  82253175
Query            61  TGTTGAGCATTCCTTGCGTGCGGAAGAACGTGTGGCGGCTT  101
                     | | |||| ||||||  | ||||||||||||||||||||||
Subject    82253176  TATCGAGCGTTCCTTATGCGCGGAAGAACGTGTGGCGGCTT  82253216

Nucleotide Sequence (101 letters)

Query number:66
Query ID:Query_66
Definition line:zxx-066
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
174.4 4683.2 100% 1.164e-42 98% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19104179 to 19104279 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Subject    19104179  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCGGAAATGTTGAGCGTTCC  19104238
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19104239  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  19104279

Range 2: 146971865 to 146971965 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   146971865  AAGCTCAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCGTTCC  146971924
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     ||||| |||||||||||||||||||||||||||||||||||
Subject   146971925  TTGCGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  146971965

Range 3: 133300147 to 133300047 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||
Subject   133300147  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAACGGAAATGTTGAGCGTTCC  133300088
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     ||||| |||||||||||||||||||||||||||||||||||
Subject   133300087  TTGCGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  133300047

Range 4: 159022795 to 159022697 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Subject   159022795  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  159022736
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAA  99
                     ||||| |||||||||||||||||||||||||||||||||
Subject   159022735  TTGCGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAA  159022697

Range 5: 173606963 to 173607063 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Subject   173606963  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  173607022
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || |||||||||||||||||||||||||||||||||||
Subject   173607023  TTACGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  173607063

Range 6: 180694121 to 180694021 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| ||||
Subject   180694121  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTCAGCGTTCC  180694062
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     ||||| |||||||||||||||||||||||||||||||||||
Subject   180694061  TTGCGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  180694021

Range 7: 190492339 to 190492239 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Subject   190492339  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  190492280
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || |||||||||||||||||||||||| |||||||||||||
Subject   190492279  TTACGTGCGGAAGAACGTGTGGCGGCTCTAGCAGCCGAACA  190492239

Range 8: 192460861 to 192460761 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| ||||
Subject   192460861  AAGCTTAAGATGCCCGGTCCACATGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  192460802
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || ||||||||||||||||||||||||||||||||||||||
Subject   192460801  TTACGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  192460761

Range 9: 238879208 to 238879108 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Subject   238879208  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  238879149
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || |||||||||||||| |||||||||||||||||||||||
Subject   238879148  TTACGTGCGGAAGAACGCGTGGCGGCTTTAGCAGCCGAACA  238879108

Range 10: 430690639 to 430690539 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Subject   430690639  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  430690580
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || |||||||||||||||||||||||||||||||||||
Subject   430690579  TTACGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  430690539

Range 11: 417852707 to 417852607 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||
Subject   417852707  AAGCTTAAGATGCCCTGTCCACGTGGCATCATCACAATTAGCGGAAATATTGAGCGTTCC  417852648
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     ||||| |||||||||||||||||||| ||||||||||||||
Subject   417852647  TTGCGCGCGGAAGAACGTGTGGCGGCATTAGCAGCCGAACA  417852607

Range 12: 423692566 to 423692666 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Subject   423692566  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  423692625
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || ||||||||||||||||||||||||| |||||||||
Subject   423692626  TTACGCGCGGAAGAACGTGTGGCGGCTTTAGTAGCCGAACA  423692666

Range 13: 104896196 to 104896096 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||
Subject   104896196  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCATAGTTAGCGGAAATGTTGAGCGTTCC  104896137
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || ||||| |||||||||||||||||||||||||||||
Subject   104896136  TTACGCGCGGAGGAACGTGTGGCGGCTTTAGCAGCCGAACA  104896096

Range 14: 120282285 to 120282185 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     ||||||||||||||| |||||||||||||||||||||||||| ||||| | |||| ||||
Subject   120282285  AAGCTTAAGATGCCCAGTCCACGTGGCATCATCACAATTAGCGGAAATATCGAGCGTTCC  120282226
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || |||||||||||||||||||||||||||||||||||
Subject   120282225  TTACGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  120282185

Range 15: 165505099 to 165505199 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||| |||||||||| |||||||||||||| |||||||||||||||||| ||||
Subject   165505099  AAGCTTAAGAAGCCCGGTCCATGTGGCATCATCACAGTTAGCAGAAATGTTGAGCGTTCC  165505158
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || |||||||| ||||||||||||||||||||| |||||||
Subject   165505159  TTACGTGCGGAGGAACGTGTGGCGGCTTTAGCAACCGAACA  165505199

Range 16: 165814600 to 165814500 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     ||||||||||||||||||||| |||||||||||||| |||||||||||||||| | ||||
Subject   165814600  AAGCTTAAGATGCCCGGTCCATGTGGCATCATCACAGTTAGCAGAAATGTTGATCGTTCC  165814541
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || ||||| |||||||||||||||||||||||||||||
Subject   165814540  TTACGCGCGGAGGAACGTGTGGCGGCTTTAGCAGCCGAACA  165814500

Range 17: 180729852 to 180729952 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| ||||
Subject   180729852  AAGCTTAAGATGCCCCGTCCACGTGGCATCATCACAGTTAGCAGAAATATTGAGCGTTCC  180729911
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || |||||||||| ||||||||||||||||||||||||
Subject   180729912  TTACGCGCGGAAGAACATGTGGCGGCTTTAGCAGCCGAACA  180729952

Range 18: 207125223 to 207125123 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||||
Subject   207125223  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAACGTTGAGCGTTCC  207125164
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || | |||||||||||||||||||||||||||||||||
Subject   207125163  TTACGCGTGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  207125123

Range 19: 254531847 to 254531947 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| | ||
Subject   254531847  AAGCTTAAGATGCCCGATCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTCCC  254531906
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || |||||||||||||| |||||||||||||||||||||||
Subject   254531907  TTACGTGCGGAAGAACGCGTGGCGGCTTTAGCAGCCGAACA  254531947

Range 20: 283064259 to 283064159 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||
Subject   283064259  AAGCTTAAGATGCCCGGTCCACATGGCATCATCACAGTTAGCAGAAATGTTGAGCGTTCC  283064200
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || |||||||||||||||| |||| |||||||||||||
Subject   283064199  TTACGCGCGGAAGAACGTGTGGGGGCTCTAGCAGCCGAACA  283064159

Range 21: 333336159 to 333336059 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||
Subject   333336159  AAGCTTAAGATGCCCGGTCCACGTGGCATCATTACATTTAGCGGAAATGTTGAGCGTTCC  333336100
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || ||||||||| |||||||||||||||||||||||||
Subject   333336099  TTACGCGCGGAAGAAGGTGTGGCGGCTTTAGCAGCCGAACA  333336059

Range 22: 338920507 to 338920607 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||| ||||||| ||||||||||||||||||| | ||| |||||| ||||
Subject   338920507  AAGCTTAAGATGCCTGGTCCACATGGCATCATCACAATTAGCGGGAATATTGAGCGTTCC  338920566
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     ||||| |||||||||||||||||||||||||||||||||||
Subject   338920567  TTGCGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  338920607

Range 23: 367171579 to 367171679 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||
Subject   367171579  AAGCTTAAGATGCCCGGTTCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  367171638
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || ||||| |||||||||||||||||||||||||||||
Subject   367171639  TTACGCGCGGAGGAACGTGTGGCGGCTTTAGCAGCCGAACA  367171679

Range 24: 369529813 to 369529713 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Subject   369529813  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  369529754
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || | ||| |||||||||||||||||||||||||||||
Subject   369529753  TTACGCGTGGAGGAACGTGTGGCGGCTTTAGCAGCCGAACA  369529713

Range 25: 406532941 to 406533041 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||
Subject   406532941  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAGTTAGCGGAAATGTTGAGCGTTCC  406533000
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || ||||| ||| |||||||||||||||||||||||||
Subject   406533001  TTACGCGCGGAGGAATGTGTGGCGGCTTTAGCAGCCGAACA  406533041

Range 26: 417154490 to 417154390 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||
Subject   417154490  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCATAGTTAGCGGAAATGTTGAGCGTTCC  417154431
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || ||||| |||||||||||||||||||||||||||||
Subject   417154430  TTACGCGCGGAGGAACGTGTGGCGGCTTTAGCAGCCGAACA  417154390

Range 27: 435704706 to 435704606 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||
Subject   435704706  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCGGAAATATCGAGCGTTCC  435704647
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     ||  | |||||||||||||||||||||||||||||||||||
Subject   435704646  TTATGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  435704606

Range 28: 458170532 to 458170432 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||
Subject   458170532  AAGCTTAAGATGCCCGGTCCACGTGGCATCATTACAGTTAGCGGAAATGTTGAGCGTTCC  458170473
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || |||||||| ||||||||||||||||||||||||||
Subject   458170472  TTACGCGCGGAAGAGCGTGTGGCGGCTTTAGCAGCCGAACA  458170432

Range 29: 467917410 to 467917310 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||
Subject   467917410  AAGCTTAAGATGCCCGGTCCACGTGGCATCATTACAGTTAGCGGAAATGTTGAGCGTTCC  467917351
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     || || ||||||||| |||||||||||||||||||||||||
Subject   467917350  TTACGCGCGGAAGAAGGTGTGGCGGCTTTAGCAGCCGAACA  467917310

Range 30: 473735105 to 473735205 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCAGAAATGTTGAGCATTCC  60
                     |||||||||||||||||||||||||||||||||||||||||| ||||| | |||| ||||
Subject   473735105  AAGCTTAAGATGCCCGGTCCACGTGGCATCATCACAATTAGCGGAAATATCGAGCGTTCC  473735164
Query            61  TTGCGTGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  101
                     ||  | |||||||||||||||||||||||||||||||||||
Subject   473735165  TTATGCGCGGAAGAACGTGTGGCGGCTTTAGCAGCCGAACA  473735205

Nucleotide Sequence (101 letters)

Query number:67
Query ID:Query_67
Definition line:zxx-067
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 178.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 1

Range 1: 19109768 to 19109868 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CCTCTCTAGTCAACTATATCGATCAGTTCATTTCTTTATATGCAGTAGCAGCATTCAGCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19109768  CCTCTCTAGTCAACTATATCGATCAGTTCATTTCTTTATATGCAGTAGCAGCATTAAGCA  19109827
Query            61  CGGCTAGCGCAAATGCTGGATTTTTAGCATGCCCCTCGAAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19109828  CGGCTAGCGCAAATGCTGGATTTTTAGCATGCCCCTCGAAA  19109868

Nucleotide Sequence (101 letters)

Query number:68
Query ID:Query_68
Definition line:zxx-068
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4028.5 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19123324 to 19123424 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19123324  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAATAGAG  19123383
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19123384  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  19123424

Range 2: 19117259 to 19117359 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Subject    19117259  TCTATGACATTGGGTACATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  19117318
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     |||||||||||||||||||||||||||||||||| ||||||
Subject    19117319  TCACAGATACTAAGGACAACTTGCTACAATCGTTGCTTCAA  19117359

Range 3: 19120265 to 19120365 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    19120265  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  19120324
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     |||||||| ||||||||||||||||||||||||| ||||||
Subject    19120325  TCACAGATGCTAAGGACAACTTGCTACAATCGTTGCTTCAA  19120365

Range 4: 19126321 to 19126421 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    19126321  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  19126380
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     |||||||| ||||||||||||||||||||||||| ||||||
Subject    19126381  TCACAGATGCTAAGGACAACTTGCTACAATCGTTGCTTCAA  19126421

Range 5: 19135351 to 19135451 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Subject    19135351  TCTATGACATTGGGTTAATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  19135410
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     |||||||| ||||||||||||||||||||||||||||||||
Subject    19135411  TCACAGATGCTAAGGACAACTTGCTACAATCGTTCCTTCAA  19135451

Range 6: 19129380 to 19129480 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Subject    19129380  TCTGTGACATTGGGTTCATTAACGCCAATACCATAAATGAATGGTCGGTTCAAAACAGAG  19129439
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     |||||||| ||||||||||||||||||||||||||||||||
Subject    19129440  TCACAGATGCTAAGGACAACTTGCTACAATCGTTCCTTCAA  19129480

Range 7: 19138408 to 19138507 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 97/101(96%) 1/101(1%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Subject    19138408  TCTATGACATTGGGTTCATTAACCCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  19138467
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     |||| ||||||||||||||||| ||||||||||| ||||||
Subject    19138468  TCACGGATACTAAGGACAACTT-CTACAATCGTTGCTTCAA  19138508

Range 8: 419840203 to 419840301 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Subject   419840203  TCTATGACATTGGGTTCATTAACCCAAATACCATAAATGAAGGGTCGGTTCAAAACAGAG  419840262
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                     ||| |||||| ||||||||||||||||||||||| ||||
Subject   419840263  TCAAAGATACCAAGGACAACTTGCTACAATCGTTGCTTC  419840301

Range 9: 351423159 to 351423062 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
146.5 bits(161) 0.0 91/98(93%) 0/98(0%) +1/-1 
Query             2  CTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAGT  61
                     |||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||||
Subject   351423159  CTATGACAATGGATTCATTAACCCAAATACCATAAATGAATGGTCGGTTAAAAACAGAGT  351423100
Query            62  CACAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                     |||||||||  |||||||||||||||||||||| ||||
Subject   351423099  CACAGATACCGAGGACAACTTGCTACAATCGTTGCTTC  351423062

Range 10: 496131773 to 496131675 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 91/99(92%) 0/99(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||
Subject   496131773  TCTATGACATTGGGTTCATTAACCCAAATACTGTAAATGAATGGTCGGTTCAAAACAGAG  496131714
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                     ||  ||||| | |||||||||||||||||||||| ||||
Subject   496131713  TCGAAGATATTGAGGACAACTTGCTACAATCGTTACTTC  496131675

Range 11: 493135615 to 493135522 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 87/94(93%) 0/94(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| |||||| |||| |||||||| ||||| |||||||||
Subject   493135615  TCTATGACATTGGGTTCATTAACCCAAATATCATACATGAATGGACGGTTAAAAACAGAG  493135556
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTT  94
                     ||||||||||  ||||||||||||||||||||||
Subject   493135555  TCACAGATACCGAGGACAACTTGCTACAATCGTT  493135522

Range 12: 471702347 to 471702247 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
138.3 bits(152) 0.0 91/101(90%) 0/101(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| |||||| |||| || ||||| ||||| |||||||||
Subject   471702347  TCTATGACATTGGGTTCATTAACCCAAATATCATACATAAATGGACGGTTAAAAACAGAG  471702288
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     ||||||||||| ||||||||||||||||||| || ||| ||
Subject   471702287  TCACAGATACTGAGGACAACTTGCTACAATCATTGCTTAAA  471702247

Range 13: 65419113 to 65419209 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
132.0 bits(145) 0.0 89/99(90%) 2/99(2%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| |||||||  |||||||||  ||||||||||  ||||
Subject    65419113  TCTATGACATTGGGTTCATTAACCCAAATACTGTAAATGAAT--TCGGTTCAAAGTAGAG  65419172
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                     ||| ||||||| |||||||||||||||||||||| ||||
Subject    65419173  TCAAAGATACTGAGGACAACTTGCTACAATCGTTACTTC  65419211

Range 14: 2926746 to 2926648 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
130.2 bits(143) 0.0 88/99(89%) 0/99(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||| | |||||||| ||||||||||| |||| ||||||||||
Subject     2926746  TCTATGACATTGGGTTCATTAGCCCAAATACCGTAAATGAATGGGCGGTACAAAACAGAG  2926687
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                     ||| ||||||| |||  ||||||||| || |||||||||
Subject     2926686  TCAAAGATACTGAGGCTAACTTGCTAAAAGCGTTCCTTC  2926648

Range 15: 42061334 to 42061234 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 88/101(87%) 0/101(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     |||||||||| |||||||||||| |||||| |||| |||||||| ||||||||||    |
Subject    42061334  TCTATGACATCGGGTTCATTAACCCAAATATCATACATGAATGGACGGTTCAAAAGTATG  42061275
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     ||||||| || ||||||||||||||||||||||| ||| ||
Subject    42061274  TCACAGAAACCAAGGACAACTTGCTACAATCGTTGCTTAAA  42061234

Range 16: 42111055 to 42110955 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 88/101(87%) 0/101(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     |||||||||| |||||||||||| |||||| |||| |||||||| ||||||||||    |
Subject    42111055  TCTATGACATCGGGTTCATTAACCCAAATATCATACATGAATGGACGGTTCAAAAGTATG  42110996
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     ||||||| || ||||||||||||||||||||||| ||| ||
Subject    42110995  TCACAGAAACCAAGGACAACTTGCTACAATCGTTGCTTAAA  42110955

Range 17: 42160756 to 42160656 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
124.8 bits(137) 0.0 88/101(87%) 0/101(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     |||||||||| |||||||||||| |||||| |||| |||||||| ||||||||||    |
Subject    42160756  TCTATGACATCGGGTTCATTAACCCAAATATCATACATGAATGGACGGTTCAAAAGTATG  42160697
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     ||||||| || ||||||||||||||||||||||| ||| ||
Subject    42160696  TCACAGAAACCAAGGACAACTTGCTACAATCGTTGCTTAAA  42160656

Range 18: 499519540 to 499519444 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
122.1 bits(134) 0.0 85/97(88%) 0/97(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| |||||  |||| |||||||| ||||| || |||  |
Subject   499519540  TCTATGACATTGGGTTCATTAACCCAAATGTCATACATGAATGGACGGTTAAACACAATG  499519481
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCT  97
                     ||||||| || ||||||||||||||||||||||| ||
Subject   499519480  TCACAGAAACCAAGGACAACTTGCTACAATCGTTGCT  499519444

Range 19: 7089403 to 7089305 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
121.2 bits(133) 0.0 86/99(87%) 0/99(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||| ||||| | |||||||| ||||||||||| |||| ||||||||||
Subject     7089403  TCTATGACATTGGGTCCATTAGCCCAAATACCGTAAATGAATGGACGGTACAAAACAGAG  7089344
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                     |   ||||||| || | ||||||||| ||||||||||||
Subject     7089343  TTGAAGATACTGAGCAAAACTTGCTAAAATCGTTCCTTC  7089305

Range 20: 403497545 to 403497448 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
119.4 bits(131) 0.0 85/98(87%) 0/98(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||| | |||||||  ||||||||||| |||| ||||||||||
Subject   403497545  TCTATGACATTGGGTTCATTAGCCCAAATACTGTAAATGAATGGACGGTACAAAACAGAG  403497486
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTT  98
                     |   ||||||| |||| ||||||||| || ||||||||
Subject   403497485  TTGAAGATACTGAGGAAAACTTGCTAAAAGCGTTCCTT  403497448

Range 21: 488305279 to 488305379 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
115.8 bits(127) 0.0 86/101(85%) 0/101(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| |||||  |||| |||||||| ||||| || |||  |
Subject   488305279  TCTATGACATTGGGTTCATTAACCCAAATGTCATACATGAATGGACGGTTAAACACAATG  488305338
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     ||||||| ||  ||||||||||||||||||| || ||| ||
Subject   488305339  TCACAGAAACCGAGGACAACTTGCTACAATCTTTGCTTAAA  488305379

Range 22: 85859832 to 85859928 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
113.1 bits(124) 0.0 83/97(86%) 0/97(0%) +1/+1 
Query             2  CTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAGT  61
                     |||||||||||||||||||| | |||||||| ||||||||||| |||| ||||| |||||
Subject    85859832  CTATGACATTGGGTTCATTAGCCCAAATACCGTAAATGAATGGACGGTACAAAATAGAGT  85859891
Query            62  CACAGATACTAAGGACAACTTGCTACAATCGTTCCTT  98
                        ||||||| |||| ||||||||| || | ||||||
Subject    85859892  TGAAGATACTGAGGAAAACTTGCTAAAAGCATTCCTT  85859928

Range 23: 19132342 to 19132433 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
110.4 bits(121) 0.0 85/101(84%) 9/101(9%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||
Subject    19132342  TCTATGACACTGGGTTCATTAACCCAAATACCATAAATGAATGGTTGGTTCAAAACAGAG  19132401
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCTTCAA  101
                     ||   || |        ||||||||||||||||| ||||||
Subject    19132402  TC-TTGACA--------AACTTGCTACAATCGTTGCTTCAA  19132442

Range 24: 26493026 to 26492934 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
110.4 bits(121) 0.0 80/93(86%) 0/93(0%) +1/-1 
Query             5  TGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAGTCAC  64
                     ||||||||||||||||||| |||||  |||| |||||||| ||||| || |||  ||| |
Subject    26493026  TGACATTGGGTTCATTAACCCAAATGTCATACATGAATGGACGGTTAAACACAATGTCTC  26492967
Query            65  AGATACTAAGGACAACTTGCTACAATCGTTCCT  97
                     ||| || ||||||||||||||||||||||| ||
Subject    26492966  AGAAACCAAGGACAACTTGCTACAATCGTTGCT  26492934

Range 25: 4181402 to 4181306 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
108.6 bits(119) 0.0 82/97(85%) 0/97(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||| ||||||||| |||||| |||| |||||||| ||||| |||| |  |
Subject     4181402  TCTATGACATTGGTTTCATTAACCCAAATATCATACATGAATGGACGGTTAAAAAGAATG  4181343
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCT  97
                     ||| ||| ||  |||||||||||||||||| ||| ||
Subject     4181342  TCATAGAAACCGAGGACAACTTGCTACAATTGTTGCT  4181306

Range 26: 442818981 to 442818885 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
108.6 bits(119) 0.0 82/97(85%) 0/97(0%) +1/-1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     ||||||||||||||||||||||| |||||  |||| |||||||| ||||| || |||  |
Subject   442818981  TCTATGACATTGGGTTCATTAACCCAAATGTCATACATGAATGGGCGGTTAAACACAATG  442818922
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCT  97
                     || |||| ||  |||||||||||||||| ||||| ||
Subject   442818921  TCTCAGAAACCGAGGACAACTTGCTACACTCGTTGCT  442818885

Range 27: 445133577 to 445133673 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
108.6 bits(119) 0.0 82/97(85%) 0/97(0%) +1/+1 
Query             1  TCTATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAG  60
                     |||| |||||||||||||||||| ||||||  ||| ||||||||  |||| |||| |  |
Subject   445133577  TCTACGACATTGGGTTCATTAACCCAAATATAATACATGAATGGATGGTTAAAAAGAATG  445133636
Query            61  TCACAGATACTAAGGACAACTTGCTACAATCGTTCCT  97
                     ||| ||| || ||||||||||||||||||||||| ||
Subject   445133637  TCAAAGAAACCAAGGACAACTTGCTACAATCGTTGCT  445133673

Range 28: 74568 to 74663 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
106.8 bits(117) 0.0 81/96(84%) 0/96(0%) +1/+1 
Query             4  ATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAGTCA  63
                     ||||  |||||||||||| | |||||||  |||||||||    |||  |||| |||||||
Subject       74568  ATGATGTTGGGTTCATTAGCCCAAATACTGTAAATGAATTTATGGTAAAAAAGAGAGTCA  74627
Query            64  CAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                      ||||||| |||||||||||||||||||||||||||
Subject       74628  AAGATACTGAGGACAACTTGCTACAATCGTTCCTTC  74663

Range 29: 169386 to 169481 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
106.8 bits(117) 0.0 81/96(84%) 0/96(0%) +1/+1 
Query             4  ATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAGTCA  63
                     ||||  |||||||||||| | |||||||  |||||||||    |||  |||| |||||||
Subject      169386  ATGATGTTGGGTTCATTAGCCCAAATACTGTAAATGAATTTATGGTAAAAAAGAGAGTCA  169445
Query            64  CAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                      ||||||| |||||||||||||||||||||||||||
Subject      169446  AAGATACTGAGGACAACTTGCTACAATCGTTCCTTC  169481

Range 30: 264211 to 264306 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
106.8 bits(117) 0.0 81/96(84%) 0/96(0%) +1/+1 
Query             4  ATGACATTGGGTTCATTAACGCAAATACCATAAATGAATGGTCGGTTCAAAACAGAGTCA  63
                     ||||  |||||||||||| | |||||||  |||||||||    |||  |||| |||||||
Subject      264211  ATGATGTTGGGTTCATTAGCCCAAATACTGTAAATGAATTTATGGTAAAAAAGAGAGTCA  264270
Query            64  CAGATACTAAGGACAACTTGCTACAATCGTTCCTTC  99
                      ||||||| |||||||||||||||||||||||||||
Subject      264271  AAGATACTGAGGACAACTTGCTACAATCGTTCCTTC  264306

Nucleotide Sequence (101 letters)

Query number:69
Query ID:Query_69
Definition line:zxx-069
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4500.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19127605 to 19127705 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19127605  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCATCCCG  19127664
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19127665  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  19127705

Range 2: 19130607 to 19130707 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject    19130607  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  19130666
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     || ||||||||||||||||||||||| ||| ||||||||||
Subject    19130667  CAACGGCCACGTGGAGCCCCTTCTGTCCCGATTTGTAAGCG  19130707

Range 3: 19133617 to 19133717 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject    19133617  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  19133676
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||| ||||||||||||||| ||||| ||||||||||||||
Subject    19133677  CAGCAGCCACGTGGAGCCCCGTCTGTCCCGGTTTGTAAGCG  19133717

Range 4: 351421867 to 351421767 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Subject   351421867  CTTTTGGTCCCGGTTGGTGTTACCAACTGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  351421808
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||||||||||||||||||||||||| |||||| |||||||
Subject   351421807  CAGCGGCCACGTGGAGCCCCTTCTGTCCCGGTTCGTAAGCG  351421767

Range 5: 65466950 to 65467049 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 96/100(96%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Subject    65466950  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  65467009
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     || ||||||||||||||||||||||| |||||| ||||||
Subject    65467010  CAACGGCCACGTGGAGCCCCTTCTGTCCCGGTTCGTAAGC  65467049

Range 6: 502774757 to 502774658 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 94/100(94%) 0/100(0%) +1/-1 
Query             2  TTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCGC  61
                     |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Subject   502774757  TTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGCCCTCCTGCCTGGGCTCCCCGC  502774698
Query            62  AGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                      ||||||||||||||| |||||||| |||||| |||||||
Subject   502774697  GGCGGCCACGTGGAGCACCTTCTGTCCCGGTTCGTAAGCG  502774658

Range 7: 502798610 to 502798511 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 94/100(94%) 0/100(0%) +1/-1 
Query             2  TTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCGC  61
                     |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Subject   502798610  TTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGCCCTCCTGCCTGGGCTCCCCGC  502798551
Query            62  AGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                      ||||||||||||||| |||||||| |||||| |||||||
Subject   502798550  GGCGGCCACGTGGAGCACCTTCTGTCCCGGTTCGTAAGCG  502798511

Range 8: 19136672 to 19136770 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
Subject    19136672  CTTTTGGTCCCGGTTGGTGTTACCAACCAGGACTAAAGGTCCTCCTTCCTGGGCACCCTG  19136731
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAG  99
                     ||||||||||||||||||| |||||| |||||| |||||
Subject    19136732  CAGCGGCCACGTGGAGCCCTTTCTGTCCCGGTTCGTAAG  19136770

Range 9: 19121549 to 19121649 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||
Subject    19121549  CTTTTGGTCCCGGTTGATATTACGAACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  19121608
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||||||||||||||||||||||||| || ||| |||||||
Subject    19121609  CAGCGGCCACGTGGAGCCCCTTCTGTCCCTGTTCGTAAGCG  19121649

Range 10: 19139691 to 19139791 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||
Subject    19139691  CTTTTGGTCCCGGTTGATATTACGAACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  19139750
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||||||||||||||||||||||||| || ||| |||||||
Subject    19139751  CAGCGGCCACGTGGAGCCCCTTCTGTCCCTGTTCGTAAGCG  19139791

Range 11: 488306511 to 488306611 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     ||||||||||| |||||| |||||||||||||||||||||| |||||||||||| |||| 
Subject   488306511  CTTTTGGTCCCAGTTGGTATTACCAACCGGGACTAAAGGTCTTCCTGCCTGGGCTCCCCA  488306570
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||| ||||||||||||||||||||| ||||||||||||||
Subject   488306571  CAGCAGCCACGTGGAGCCCCTTCTGTCCCGGTTTGTAAGCG  488306611

Range 12: 493134314 to 493134214 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||
Subject   493134314  CTTTTGGTCTCAGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  493134255
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||||||||||||||||||||| ||| || ||| |||||||
Subject   493134254  CAGCGGCCACGTGGAGCCCCTTTTGTCCCAGTTCGTAAGCG  493134214

Range 13: 18528137 to 18528039 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
148.3 bits(163) 0.0 92/99(93%) 0/99(0%) +1/-1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Subject    18528137  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGTGCCCCG  18528078
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAG  99
                     ||||||||| ||||||||||||| || ||||||  ||||
Subject    18528077  CAGCGGCCATGTGGAGCCCCTTCCGTCCCGGTTCATAAG  18528039

Range 14: 499518252 to 499518154 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
148.3 bits(163) 0.0 92/99(93%) 0/99(0%) +1/-1 
Query             3  TTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCGCA  62
                     ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Subject   499518252  TTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGCCCTCCTGCGTGGGCTCCCCGCA  499518193
Query            63  GCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     ||||||||||||||  |||||||| |||||| |||||||
Subject   499518192  GCGGCCACGTGGAGAGCCTTCTGTCCCGGTTCGTAAGCG  499518154

Range 15: 445134868 to 445134968 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||
Subject   445134868  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGCCCTCCTGCCTGGGCTCGCCG  445134927
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     ||||||||||||||||| || ||||| || ||| |||||||
Subject   445134928  CAGCGGCCACGTGGAGCACCATCTGTCCCAGTTCGTAAGCG  445134968

Range 16: 75825 to 75924 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Subject       75825  CTTTCGGTCCCGGTTGGTGTTACCTACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  75884
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     ||||||||||||||||||| ||| || || ||| ||||||
Subject       75885  CAGCGGCCACGTGGAGCCCATTCGGTCCCAGTTCGTAAGC  75924

Range 17: 170643 to 170742 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Subject      170643  CTTTCGGTCCCGGTTGGTGTTACCTACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  170702
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     ||||||||||||||||||| ||| || || ||| ||||||
Subject      170703  CAGCGGCCACGTGGAGCCCATTCGGTCCCAGTTCGTAAGC  170742

Range 18: 265468 to 265567 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Subject      265468  CTTTCGGTCCCGGTTGGTGTTACCTACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  265527
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     ||||||||||||||||||| ||| || || ||| ||||||
Subject      265528  CAGCGGCCACGTGGAGCCCATTCGGTCCCAGTTCGTAAGC  265567

Range 19: 360292 to 360391 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Subject      360292  CTTTCGGTCCCGGTTGGTGTTACCTACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  360351
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     ||||||||||||||||||| ||| || || ||| ||||||
Subject      360352  CAGCGGCCACGTGGAGCCCATTCGGTCCCAGTTCGTAAGC  360391

Range 20: 455117 to 455216 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Subject      455117  CTTTCGGTCCCGGTTGGTGTTACCTACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  455176
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     ||||||||||||||||||| ||| || || ||| ||||||
Subject      455177  CAGCGGCCACGTGGAGCCCATTCGGTCCCAGTTCGTAAGC  455216

Range 21: 549953 to 550052 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Subject      549953  CTTTCGGTCCCGGTTGGTGTTACCTACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  550012
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     ||||||||||||||||||| ||| || || ||| ||||||
Subject      550013  CAGCGGCCACGTGGAGCCCATTCGGTCCCAGTTCGTAAGC  550052

Range 22: 644825 to 644924 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Subject      644825  CTTTCGGTCCCGGTTGGTGTTACCTACCGGGACTAAAGGTCCTCCTGCCTGGGCGCCCCG  644884
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     ||||||||||||||||||| ||| || || ||| ||||||
Subject      644885  CAGCGGCCACGTGGAGCCCATTCGGTCCCAGTTCGTAAGC  644924

Range 23: 97870723 to 97870822 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Subject    97870723  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTGCTCCTGCCTGGGCGCCCCG  97870782
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     |||||||||||||  || |||||||| ||||||  |||||
Subject    97870783  CAGCGGCCACGTGACGCTCCTTCTGTCCCGGTTCATAAGC  97870822

Range 24: 450405411 to 450405510 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
143.8 bits(158) 0.0 93/101(92%) 1/101(1%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||| ||||||||||||||||||||||||||||||||| |||||||||||||  ||||
Subject   450405411  CTTTTGATCCCGGTTGGTGTTACCAACCGGGACTAAAGGTGCTCCTGCCTGGGC-GCCCG  450405470
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     ||| ||||||||| |||||||||||| |||||| |||||||
Subject   450405471  CAGTGGCCACGTGAAGCCCCTTCTGTCCCGGTTCGTAAGCG  450405511

Range 25: 19115536 to 19115632 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.9 bits(156) 0.0 92/101(91%) 4/101(4%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||||||||    ||||||| |||||
Subject    19115536  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCT----CCTGGGCGCCCCG  19115595
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||||||||||||||||| ||||| | |||||| |||||||
Subject    19115596  CAGCGGCCACGTGGAGCCTCTTCTTTCCCGGTTCGTAAGCG  19115636

Range 26: 19118539 to 19118635 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
141.9 bits(156) 0.0 92/101(91%) 4/101(4%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||||||||    ||||||| |||||
Subject    19118539  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCT----CCTGGGCGCCCCG  19118598
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     |||||||||||||||||| ||||| | |||||| |||||||
Subject    19118599  CAGCGGCCACGTGGAGCCTCTTCTTTCCCGGTTCGTAAGCG  19118639

Range 27: 4180112 to 4180016 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
140.1 bits(154) 0.0 89/97(92%) 0/97(0%) +1/-1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||
Subject     4180112  CTTTTGGTCCCGGTTGGTGTTACAAACCGGGACTAAAGGTCCTCCTTCCTGGGCGCCCCG  4180053
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTA  97
                     ||||||||| |||| ||||| ||||| |||||| |||
Subject     4180052  CAGCGGCCATGTGGTGCCCCATCTGTCCCGGTTCGTA  4180016

Range 28: 77023882 to 77023980 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 90/99(91%) 0/99(0%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||   |||||| | ||||| |||||
Subject    77023882  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAATACCCTCCTACATGGGCTCCCCG  77023941
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAG  99
                     ||||||||||||||||| ||||| || ||||||||||||
Subject    77023942  CAGCGGCCACGTGGAGCACCTTCAGTCCCGGTTTGTAAG  77023980

Range 29: 320308663 to 320308761 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
139.2 bits(153) 0.0 90/99(91%) 0/99(0%) +1/+1 
Query             2  TTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCGC  61
                     ||||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||
Subject   320308663  TTTTGGTCCCGGTCGGTGTTACTAACCGGGACTAAAGGTGCTCCTGCCTGGGCGCCCCGC  320308722
Query            62  AGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGC  100
                     ||||||||||||||| || |||||| || ||| ||||||
Subject   320308723  AGCGGCCACGTGGAGACCTTTCTGTCCCTGTTCGTAAGC  320308761

Range 30: 19124595 to 19124691 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
137.4 bits(151) 0.0 91/101(90%) 4/101(4%) +1/+1 
Query             1  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCTCCTGCCTGGGCACCCCG  60
                     |||||||||||||||||||||||||||||||||||||||||||    ||||||| |||||
Subject    19124595  CTTTTGGTCCCGGTTGGTGTTACCAACCGGGACTAAAGGTCCT----CCTGGGCGCCCCG  19124654
Query            61  CAGCGGCCACGTGGAGCCCCTTCTGTTCCGGTTTGTAAGCG  101
                     ||| |||||||||||||| ||||| | |||||| |||||||
Subject    19124655  CAGTGGCCACGTGGAGCCTCTTCTTTCCCGGTTCGTAAGCG  19124695

Nucleotide Sequence (101 letters)

Query number:70
Query ID:Query_70
Definition line:zxx-070
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4569.6 129% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19135620 to 19135720 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19135620  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTACAAT  19135679
Query            61  GCTCCAGAAGTAAGTTCAATCGACATTATCGCACCATATCG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19135680  GCTCCAGAAGTAAGTTCAATCGACATTATCGCACCATATCG  19135720

Range 2: 19126590 to 19126691 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
168.1 bits(185) 0.0 99/102(97%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    19126590  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  19126649
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||| ||||||||||||||||| ||||||||||||||||||
Subject    19126650  GCTCCGGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  19126691

Range 3: 19120534 to 19120634 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 98/101(97%) 1/101(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    19120534  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  19120593
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATC  101
                     ||||| ||||||||||||||||| |||||||||||||||||
Subject    19120594  GCTCCGGAAGTAAGTTCAATCGATCATTATCGCACCATATC  19120634

Range 4: 19117528 to 19117629 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Subject    19117528  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATGACTGCAAT  19117587
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||| ||||||||||||| ||||||||||||||||||
Subject    19117588  GCTCCAGAAATAAGTTCAATCGATCATTATCGCACCATATCG  19117629

Range 5: 19129649 to 19129750 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Subject    19129649  AGTAGCTTTCTTAGACTCGAGACGAAAAGATCCCCGGGACTATGCGGACATCACTGCCAT  19129708
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject    19129709  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  19129750

Range 6: 19132602 to 19132703 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
163.6 bits(180) 0.0 98/102(96%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Subject    19132602  AGTATCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATGACTGCAAT  19132661
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     |||||||||||||||||||||||  |||||||||||||||||
Subject    19132662  GCTCCAGAAGTAAGTTCAATCGATTATTATCGCACCATATCG  19132703

Range 7: 19138676 to 19138777 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 97/102(95%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Subject    19138676  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCCAGAACTATGCAGACATGACTGCAAT  19138735
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject    19138736  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  19138777

Range 8: 19123593 to 19123694 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 96/102(94%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Subject    19123593  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGAACATGACTGCAAT  19123652
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||| |||||||| |||| ||||||||||||||||||
Subject    19123653  GCTCCAGAAATAAGTTCAGTCGATCATTATCGCACCATATCG  19123694

Range 9: 42061074 to 42060973 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 96/102(94%) 1/102(1%) +1/-1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||||||||||||||||||||||||||||||| |||| |||
Subject    42061074  AGTAACCGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATGACTGAAAT  42061015
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| |||||| |||||||||||
Subject    42061014  GCTCCAGAAGTAAGTTCAATCGATCATTATAGCACCATATCG  42060973

Range 10: 42110795 to 42110694 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 96/102(94%) 1/102(1%) +1/-1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||||||||||||||||||||||||||||||| |||| |||
Subject    42110795  AGTAACCGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATGACTGAAAT  42110736
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| |||||| |||||||||||
Subject    42110735  GCTCCAGAAGTAAGTTCAATCGATCATTATAGCACCATATCG  42110694

Range 11: 42160496 to 42160395 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 96/102(94%) 1/102(1%) +1/-1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||||||||||||||||||||||||||||||| |||| |||
Subject    42160496  AGTAACCGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATGACTGAAAT  42160437
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| |||||| |||||||||||
Subject    42160436  GCTCCAGAAGTAAGTTCAATCGATCATTATAGCACCATATCG  42160395

Range 12: 18529169 to 18529068 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 95/102(93%) 1/102(1%) +1/-1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| ||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||
Subject    18529169  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCTAGGACTATGTGGACATGACTGCAAT  18529110
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     |||||||||||||||||||||||  ||||||||| |||||||
Subject    18529109  GCTCCAGAAGTAAGTTCAATCGATTATTATCGCAGCATATCG  18529068

Range 13: 77019303 to 77019404 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 95/102(93%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||||||||||||||||||| ||||||||||| |||| |||
Subject    77019303  AGTAACCGTCTTAGACTCGAGACGAAAAGATCCCCAGGAGTATGCGGACATGACTGAAAT  77019362
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||| ||||||||||||||||| ||||||||||||||||||
Subject    77019363  GCTCCGGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  77019404

Range 14: 348902240 to 348902341 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 95/102(93%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||  |||
Subject   348902240  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCGAGGACTATGCGGACATGACTAAAAT  348902299
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     |||| |||||||||||||||||| ||||||||||||||||||
Subject   348902300  GCTCAAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  348902341

Range 15: 461039602 to 461039501 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 95/102(93%) 1/102(1%) +1/-1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| |||
Subject   461039602  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCCAGGAGTATGCGGACATGACTGAAAT  461039543
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     |||| ||||||||||| |||||| ||||||||||||||||||
Subject   461039542  GCTCGAGAAGTAAGTTAAATCGATCATTATCGCACCATATCG  461039501

Range 16: 499802970 to 499802869 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 95/102(93%) 1/102(1%) +1/-1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| |  ||||||||||||||||||||||||||||||||||||||||||| |||| |||
Subject   499802970  AGTAACCATCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATGACTGAAAT  499802911
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                      |||||||||||||||||||||| ||||||||||||||||||
Subject   499802910  ACTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  499802869

Range 17: 2222688 to 2222789 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2222688  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2222747
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2222748  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2222789

Range 18: 2228725 to 2228826 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2228725  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2228784
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2228785  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2228826

Range 19: 2234788 to 2234889 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2234788  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2234847
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2234848  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2234889

Range 20: 2240790 to 2240891 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2240790  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2240849
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2240850  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2240891

Range 21: 2246832 to 2246933 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2246832  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2246891
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2246892  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2246933

Range 22: 2252929 to 2253030 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2252929  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2252988
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2252989  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2253030

Range 23: 2258988 to 2259089 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2258988  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2259047
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2259048  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2259089

Range 24: 2289319 to 2289420 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2289319  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2289378
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2289379  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2289420

Range 25: 2320028 to 2320129 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2320028  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2320087
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2320088  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2320129

Range 26: 2326067 to 2326168 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||| ||||||||||||||| |||||| |||| |||| |||
Subject     2326067  AGTAACCGTCTTAGACTCGAGACAAAAAGATCCCCAGGAGTATGCGAACATGACTGAAAT  2326126
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||||||||| ||||||||||||||||||
Subject     2326127  GCTCCAGAAGTAAGTTCAATCGATCATTATCGCACCATATCG  2326168

Range 27: 33618419 to 33618520 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||||||||||||||||||| ||||||||||| |||| |||
Subject    33618419  AGTAACCGTCTTAGACTCGAGACGAAAAGATCCCCAGGAGTATGCGGACATGACTGAAAT  33618478
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     |||| ||||||||||| |||||| ||||||||||||||||||
Subject    33618479  GCTCGAGAAGTAAGTTAAATCGATCATTATCGCACCATATCG  33618520

Range 28: 351422892 to 351422791 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/-1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| ||||||||||||||||||||||||||||| ||||||||| | |||| |||| |||
Subject   351422892  AGTAACTGTCTTAGACTCGAGACGAAAAGATCCCTAGGACTATGTGAACATGACTGAAAT  351422833
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     ||||||||||||||||| ||||| ||||||||||||||||||
Subject   351422832  GCTCCAGAAGTAAGTTCGATCGATCATTATCGCACCATATCG  351422791

Range 29: 419840472 to 419840573 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/+1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| ||||||||||||||||||||| ||||||||||  |||||||||||| ||||||||
Subject   419840472  AGTAACTGTCTTAGACTCGAGACGAATAGATCCCCAGCTCTATGCGGACATGACTGCAAT  419840531
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     |||||| |||||||||||||||| ||||||| ||||||||||
Subject   419840532  GCTCCATAAGTAAGTTCAATCGATCATTATCACACCATATCG  419840573

Range 30: 488176879 to 488176778 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 94/102(92%) 1/102(1%) +1/-1 
Query             1  AGTAGCTGTCTTAGACTCGAGACGAAAAGATCCCCAGGACTATGCGGACATCACTGCAAT  60
                     |||| | |||||||||||||||||||||||||||||||| ||||||||||| |||| |||
Subject   488176879  AGTAACCGTCTTAGACTCGAGACGAAAAGATCCCCAGGAGTATGCGGACATGACTGAAAT  488176820
Query            61  GCTCCAGAAGTAAGTTCAATCGA-CATTATCGCACCATATCG  102
                     |||| ||||||||||| |||||| ||||||||||||||||||
Subject   488176819  GCTCGAGAAGTAAGTTAAATCGATCATTATCGCACCATATCG  488176778

Nucleotide Sequence (101 letters)

Query number:71
Query ID:Query_71
Definition line:zxx-071
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4714.7 102% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19144078 to 19144178 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19144078  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGCCGT  19144137
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATATG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19144138  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATATG  19144178

Range 2: 61549908 to 61549808 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    61549908  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  61549849
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATATG  101
                     |||||||||||||| |||||||||||||||| |||||||||
Subject    61549848  GGATTCTTCTTCCAGTATTTTTATTATTTTCTAAAAATATG  61549808

Range 3: 375422315 to 375422411 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
162.7 bits(179) 0.0 94/97(97%) 0/97(0%) +1/+1 
Query             3  GCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGTGG  62
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Subject   375422315  GCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGTGG  375422374
Query            63  ATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||| ||||||||||||||||||||||||
Subject   375422375  ATTCTTCTTCCAGTATTTTTATTATTTTCCAAAAATA  375422411

Range 4: 56436366 to 56436464 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    56436366  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  56436425
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject    56436426  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  56436464

Range 5: 335288915 to 335289013 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject   335288915  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  335288974
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject   335288975  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  335289013

Range 6: 419029735 to 419029637 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 95/99(96%) 0/99(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject   419029735  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  419029676
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject   419029675  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  419029637

Range 7: 10237170 to 10237270 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||
Subject    10237170  GCGCCCAGGGGGGCAGGCGCGCCCTCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  10237229
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATATG  101
                     |||||||||||||| |||||||| |||||||||||||||||
Subject    10237230  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATATG  10237270

Range 8: 174638281 to 174638381 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||
Subject   174638281  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGATAGGTGGAGGCCCCCCTGACGT  174638340
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATATG  101
                     |||||||||||||| |||||||| |||||||||||||||||
Subject   174638341  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATATG  174638381

Range 9: 10293669 to 10293768 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||
Subject    10293669  GCGCCCAGGGGGGCAGGCGCGCCCTCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  10293728
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATAT  100
                     |||||||||||||| |||||||| ||||||||||||||||
Subject    10293729  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATAT  10293768

Range 10: 56428214 to 56428312 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||
Subject    56428214  GCGCCCAGGGGTGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGGCGT  56428273
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject    56428274  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  56428312

Range 11: 66788863 to 66788765 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject    66788863  GCGCCCAGCGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  66788804
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject    66788803  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  66788765

Range 12: 172767651 to 172767749 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Subject   172767651  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  172767710
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||| ||||
Subject   172767711  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAATAATA  172767749

Range 13: 365666793 to 365666891 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||
Subject   365666793  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAAGTGGAGGCCCCCCTGACGT  365666852
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject   365666853  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  365666891

Range 14: 367873324 to 367873226 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||
Subject   367873324  GCGCCCAGGGGGGCAGGCGCGCCCCACACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  367873265
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject   367873264  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  367873226

Range 15: 429206071 to 429205973 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||
Subject   429206071  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGCCAGGTGGAGGCCCCCCTGACGT  429206012
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject   429206011  GGATTCTTCTTCCAGTATTTTTAGTATTTTCCAAAAATA  429205973

Range 16: 437483565 to 437483663 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||  |||
Subject   437483565  GCGCCCAGGGGGGCAGGCGCGCCTCCCACCCTTGTGGACAGGTGGAGGCCCCCCTGACGT  437483624
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| ||||||||||||||||||||||||
Subject   437483625  GGATTCTTCTTCCAGTATTTTTATTATTTTCCAAAAATA  437483663

Range 17: 324334251 to 324334151 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||||||||||||||||| | |||||||||||||||||||||||||||||||||  |||
Subject   324334251  GCGCCCAGGGGGGCAGGCGTGTCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  324334192
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATATG  101
                     ||| |||||||||| ||||||||||||||||||||||||||
Subject   324334191  GGACTCTTCTTCCAGTATTTTTATTATTTTCCAAAAATATG  324334151

Range 18: 94049816 to 94049719 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 94/99(95%) 1/99(1%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||
Subject    94049816  GCGCCCAGGGGGGCAGGCGCGCCCCC-ACCCTCGTGGACAGGTGGAGCCCCCCCTGACGT  94049757
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| ||||||||||||||||||||||||
Subject    94049756  GGATTCTTCTTCCAGTATTTTTATTATTTTCCAAAAATA  94049718

Range 19: 136576166 to 136576069 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 94/99(95%) 1/99(1%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  | |
Subject   136576166  GCGCCCAGGGGGGCAGGCGCGCCCCC-ACCCTCGTGGACAGGTGGAGGCCCCCCTGACAT  136576107
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| ||||||||||||||||||||||||
Subject   136576106  GGATTCTTCTTCCAGTATTTTTATTATTTTCCAAAAATA  136576068

Range 20: 152832820 to 152832723 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 94/99(95%) 1/99(1%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||
Subject   152832820  GCGCCCAGGGGGGCAGGCGCGCCCCC-ACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  152832761
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject   152832760  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  152832722

Range 21: 333972616 to 333972519 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
153.7 bits(169) 0.0 94/99(95%) 1/99(1%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||
Subject   333972616  GCGCCCAGGGGG-CAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  333972557
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject   333972556  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  333972518

Range 22: 14411932 to 14412030 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  |||
Subject    14411932  GCGCCGAGGGGGGCAGGCGCACCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  14411991
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||||| |||||||||||||||
Subject    14411992  GGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  14412030

Range 23: 66780641 to 66780543 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||
Subject    66780641  GCGCCCAGGGGGGCAGGCGCACCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  66780582
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     ||||| |||||||| |||||||| |||||||||||||||
Subject    66780581  GGATTTTTCTTCCAGTATTTTTAATATTTTCCAAAAATA  66780543

Range 24: 138907295 to 138907393 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||  | |
Subject   138907295  GCGCCTAGGGGGGCAGGCACGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACAT  138907354
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| ||||||||||||||||||||||||
Subject   138907355  GGATTCTTCTTCCAGTATTTTTATTATTTTCCAAAAATA  138907393

Range 25: 330792131 to 330792033 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||||||||||| |||||| |||||||||||||||||||||  | |
Subject   330792131  GCGCCCAGGGGGGCAGGCGCGCCCCCTACCCTCATGGACAGGTGGAGGCCCCCCTGACAT  330792072
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| ||||||||||||||||||||||||
Subject   330792071  GGATTCTTCTTCCAGTATTTTTATTATTTTCCAAAAATA  330792033

Range 26: 434971325 to 434971423 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
152.8 bits(168) 0.0 93/99(94%) 0/99(0%) +1/+1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     ||||||||||||||||||| | |||||||||||||||||||||||||||||||||  |||
Subject   434971325  GCGCCCAGGGGGGCAGGCGGGTCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  434971384
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     |||||||||||||| |||||| |||||||||||||||||
Subject   434971385  GGATTCTTCTTCCAGTATTTTCATTATTTTCCAAAAATA  434971423

Range 27: 124138763 to 124138663 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  GCGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGT  60
                     |||||||||||||||||  ||||||||||||||||||||||||||||||||||||  |||
Subject   124138763  GCGCCCAGGGGGGCAGGTACGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGT  124138704
Query            61  GGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATATG  101
                     |||||| ||||||| |||||||| |||||||||||||||||
Subject   124138703  GGATTCCTCTTCCAGTATTTTTAATATTTTCCAAAAATATG  124138663

Range 28: 322070441 to 322070344 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 93/98(95%) 1/98(1%) +1/-1 
Query             3  GCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCC-CCCCTACCGTG  62
                     ||| |||||||||||||||||||||||||||||||||||||||||||| |||||  ||||
Subject   322070441  GCCTAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCCTGACGTG  322070382
Query            63  GATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  100
                     ||||||||||||| ||||||||||||||||||||||||
Subject   322070381  GATTCTTCTTCCAGTATTTTTATTATTTTCCAAAAATA  322070344

Range 29: 156124879 to 156124779 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.0 bits(166) 0.0 96/102(94%) 2/102(2%) +1/-1 
Query             1  GCGC-CCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCG  60
                     |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||
Subject   156124879  GCGCGCCAGGGGGGCAGGCGCGCCCCC-ACCCTCGTGGACAGGTGGAGGCCCCCCTGACG  156124820
Query            61  TGGATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATATG  102
                     ||||||||||||||| |||||||| |||||||||||||||||
Subject   156124819  TGGATTCTTCTTCCAGTATTTTTAATATTTTCCAAAAATATG  156124778

Range 30: 457161762 to 457161665 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.0 bits(166) 0.0 92/98(94%) 0/98(0%) +1/-1 
Query             2  CGCCCAGGGGGGCAGGCGCGCCCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTACCGTG  61
                     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||
Subject   457161762  CGCCCAGGGGGGCAGGCGCGCTCCCCACCCTCGTGGACAGGTGGAGGCCCCCCTGACGTG  457161703
Query            62  GATTCTTCTTCCAATATTTTTATTATTTTCCAAAAATA  99
                     ||||||||||||| |||||||  |||||||||||||||
Subject   457161702  GATTCTTCTTCCAGTATTTTTTATATTTTCCAAAAATA  457161665

Nucleotide Sequence (101 letters)

Query number:72
Query ID:Query_72
Definition line:zxx-072
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5105.1 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19154753 to 19154853 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19154753  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAACGACA  19154812
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19154813  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  19154853

Range 2: 42252798 to 42252898 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Subject    42252798  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATATCTTGTCGTATCTTAATGACA  42252857
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    42252858  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  42252898

Range 3: 66593098 to 66593197 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
172.6 bits(190) 0.0 98/100(98%) 0/100(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    66593098  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  66593157
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGG  100
                     ||||||||||||||||||||||||||||||||||||||||
Subject    66593158  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGG  66593197

Range 4: 790608 to 790708 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject      790608  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  790667
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject      790668  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  790708

Range 5: 3021636 to 3021736 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Subject     3021636  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCATGTCGTATCTTAATGACA  3021695
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject     3021696  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  3021736

Range 6: 6163021 to 6163121 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject     6163021  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  6163080
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject     6163081  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  6163121

Range 7: 8865243 to 8865343 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject     8865243  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAACGACA  8865302
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| |||||| |||||||||||||||||||||||
Subject     8865303  ATGATGGTCTGGAAGAATAGGGTGAAGAAGCAGGCTACGGT  8865343

Range 8: 9106254 to 9106354 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Subject     9106254  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATATCTTGTCGTATCTTAATGACA  9106313
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| |||||||||||||||||||||||||| |||
Subject     9106314  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTATGGT  9106354

Range 9: 9704788 to 9704888 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject     9704788  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  9704847
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject     9704848  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  9704888

Range 10: 12129381 to 12129481 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    12129381  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  12129440
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    12129441  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  12129481

Range 11: 12537882 to 12537982 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Subject    12537882  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATATCTTGTCGTATCTTAATGACA  12537941
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    12537942  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  12537982

Range 12: 21867864 to 21867764 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    21867864  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  21867805
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    21867804  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  21867764

Range 13: 30979758 to 30979858 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Subject    30979758  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAACGATA  30979817
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    30979818  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  30979858

Range 14: 33547683 to 33547783 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Subject    33547683  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATATCTTGTCGTATCTTAACGACA  33547742
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    33547743  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  33547783

Range 15: 47523685 to 47523585 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    47523685  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  47523626
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     ||||||||||||||||||||||||||||||| |||||||||
Subject    47523625  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCGGGCTACGGT  47523585

Range 16: 47626144 to 47626244 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    47626144  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  47626203
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    47626204  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  47626244

Range 17: 51086948 to 51086848 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Subject    51086948  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAATGACA  51086889
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| |||||||||||||||||||||| |||||||
Subject    51086888  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGACTACGGT  51086848

Range 18: 54430413 to 54430513 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||
Subject    54430413  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATATCTTGTCGTATCTTAACGACA  54430472
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    54430473  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  54430513

Range 19: 70775202 to 70775102 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    70775202  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  70775143
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    70775142  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  70775102

Range 20: 84249934 to 84250034 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    84249934  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  84249993
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    84249994  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  84250034

Range 21: 87314043 to 87314143 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||
Subject    87314043  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATATCTTGTCGTATCTTAACGACA  87314102
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    87314103  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  87314143

Range 22: 97163927 to 97164027 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject    97163927  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  97163986
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject    97163987  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  97164027

Range 23: 391552052 to 391551952 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   391552052  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAACGACA  391551993
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| |||| |||||||||||||||||||||||||
Subject   391551992  ATGATGGTCTGGAAGGACAGGGTGAAGAAGCAGGCTACGGT  391551952

Range 24: 462749055 to 462749155 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject   462749055  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  462749114
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject   462749115  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  462749155

Range 25: 465260299 to 465260199 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject   465260299  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  465260240
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject   465260239  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  465260199

Range 26: 479480016 to 479480116 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Subject   479480016  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATATCTTGTCGTATCTTAATGACA  479480075
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject   479480076  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  479480116

Range 27: 480281119 to 480281019 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||
Subject   480281119  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATATCTTGTCGTATCTTAACGACA  480281060
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   480281059  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  480281019

Range 28: 493192292 to 493192192 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||
Subject   493192292  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATATCTTGTCGTATCTTAACGACA  493192233
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   493192232  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  493192192

Range 29: 494640660 to 494640758 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
166.3 bits(183) 0.0 96/99(97%) 0/99(0%) +1/+1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Subject   494640660  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATGTCTTGTCGTATCTTAACGACA  494640719
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACG  99
                     |||||||||| ||||||||||||||||||||||||||||
Subject   494640720  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACG  494640758

Range 30: 4527913 to 4527813 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  AAGAGGTGTTGGGGGACATAATCTTAGCTGGAGGTGATGTCTTGTCGTATCTTAATGACA  60
                     |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||
Subject     4527913  AAGAGGTGTTGGGGGACATAATCTTAGCCGGAGGTGATATCTTGTCGTATCTTAACGACA  4527854
Query            61  ATGATGGTCTAGAAGAACAGGGTGAAGAAGCAGGCTACGGT  101
                     |||||||||| ||||||||||||||||||||||||||||||
Subject     4527853  ATGATGGTCTGGAAGAACAGGGTGAAGAAGCAGGCTACGGT  4527813

Nucleotide Sequence (101 letters)

Query number:73
Query ID:Query_73
Definition line:zxx-073
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5241.3 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19161926 to 19162026 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19161926  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  19161985
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19161986  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  19162026

Range 2: 298081546 to 298081446 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject   298081546  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  298081487
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   298081486  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  298081446

Range 3: 3501053 to 3500953 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject     3501053  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  3500994
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject     3500993  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  3500953

Range 4: 4687800 to 4687900 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject     4687800  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  4687859
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject     4687860  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  4687900

Range 5: 10236346 to 10236446 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    10236346  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  10236405
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    10236406  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  10236446

Range 6: 13961322 to 13961422 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    13961322  GAGAATTATGCCGGATGCGGTTCATCATGTAACAATCATAACATAGGGTGACACAAAACT  13961381
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    13961382  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  13961422

Range 7: 19282937 to 19282837 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19282937  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  19282878
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    19282877  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  19282837

Range 8: 21836252 to 21836152 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    21836252  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  21836193
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    21836192  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  21836152

Range 9: 40246431 to 40246531 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    40246431  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  40246490
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    40246491  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  40246531

Range 10: 42535371 to 42535271 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    42535371  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  42535312
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    42535311  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  42535271

Range 11: 45959998 to 45959898 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    45959998  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  45959939
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    45959938  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  45959898

Range 12: 48562799 to 48562899 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    48562799  GAGAATTATGCCGGATGCGGTTCATCATGTAACAATCATAACATAGGGTGACACAAAACT  48562858
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    48562859  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  48562899

Range 13: 50523561 to 50523661 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    50523561  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  50523620
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| |||||||||||||||| |||
Subject    50523621  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCAAAT  50523661

Range 14: 56688989 to 56689089 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    56688989  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  56689048
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    56689049  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  56689089

Range 15: 56694681 to 56694781 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    56694681  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  56694740
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    56694741  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  56694781

Range 16: 72043671 to 72043571 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    72043671  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  72043612
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    72043611  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  72043571

Range 17: 79599585 to 79599685 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    79599585  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  79599644
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    79599645  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  79599685

Range 18: 80932421 to 80932321 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    80932421  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  80932362
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    80932361  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  80932321

Range 19: 81267034 to 81266934 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    81267034  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  81266975
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    81266974  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  81266934

Range 20: 82026048 to 82026148 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Subject    82026048  GAGAATTATGCCGGATGCGGTTCATCATGTAACAATCATAACATAGGGTGACACAAAACT  82026107
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    82026108  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  82026148

Range 21: 89080183 to 89080083 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    89080183  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  89080124
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    89080123  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  89080083

Range 22: 91323917 to 91324017 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    91323917  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  91323976
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    91323977  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  91324017

Range 23: 98196948 to 98197048 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    98196948  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  98197007
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject    98197008  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  98197048

Range 24: 108669440 to 108669540 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   108669440  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  108669499
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   108669500  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  108669540

Range 25: 108744711 to 108744811 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   108744711  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  108744770
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   108744771  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  108744811

Range 26: 114144347 to 114144447 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   114144347  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  114144406
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   114144407  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  114144447

Range 27: 116726370 to 116726470 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   116726370  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  116726429
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   116726430  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  116726470

Range 28: 118117203 to 118117303 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   118117203  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  118117262
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   118117263  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  118117303

Range 29: 118285989 to 118286089 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   118285989  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  118286048
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   118286049  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  118286089

Range 30: 122898682 to 122898782 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAAAACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   122898682  GAGAATTATGCCGGATGCGGTTCATCATGTAACAGTCATAACATAGGGTGACACAGAACT  122898741
Query            61  AGCTCCAATTCATCAATGTAGTGTAGGCATGTATTCCGAAT  101
                     |||||||||||||||||||| ||||||||||||||||||||
Subject   122898742  AGCTCCAATTCATCAATGTAATGTAGGCATGTATTCCGAAT  122898782

Nucleotide Sequence (101 letters)

Query number:74
Query ID:Query_74
Definition line:zxx-074
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 308.2 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 2

Range 1: 19165472 to 19165572 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TGCCACACGGCGGCCTCTGGTGACTCCTGGCAGCAGGGATATGCCTACGGCAAAGTCGTC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19165472  TGCCACACGGCGGCCTCTGGTGACTCCTGGCAGCAGGGATATGCCTACGGCAAAGCCGTC  19165531
Query            61  GGCATAGATCTTCACCTAAGCCGACGGCTCTGCCGTAGGCA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19165532  GGCATAGATCTTCACCTAAGCCGACGGCTCTGCCGTAGGCA  19165572

Range 2: 13102074 to 13101974 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
129.3 bits(142) 0.0 89/101(88%) 0/101(0%) +1/-1 
Query             1  TGCCACACGGCGGCCTCTGGTGACTCCTGGCAGCAGGGATATGCCTACGGCAAAGTCGTC  60
                     ||||||  ||   |||||||||| |||||||||||||||||| |||||||||||| ||||
Subject    13102074  TGCCACGTGGACTCCTCTGGTGAGTCCTGGCAGCAGGGATATCCCTACGGCAAAGCCGTC  13102015
Query            61  GGCATAGATCTTCACCTAAGCCGACGGCTCTGCCGTAGGCA  101
                     ||||||||| |||||||| ||||||| || |||||||||||
Subject    13102014  GGCATAGATTTTCACCTATGCCGACGACTTTGCCGTAGGCA  13101974

Nucleotide Sequence (101 letters)

Query number:75
Query ID:Query_75
Definition line:zxx-075
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4717.4 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19168313 to 19168413 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19168313  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCAGTGT  19168372
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19168373  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  19168413

Range 2: 342181467 to 342181566 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
161.8 bits(178) 0.0 97/101(96%) 1/101(1%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Subject   342181467  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCCGCAGTGT  342181526
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||||||||||||| |||||
Subject   342181527  TCCTTTCTTCGGCTCGGTAGAATTGTGCGGCATCA-ATATG  342181567

Range 3: 88682755 to 88682655 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject    88682755  CAAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCTGCAGTGT  88682696
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject    88682695  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCTGATATG  88682655

Range 4: 144881468 to 144881368 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||||||||| ||||||||||||||| || || ||||
Subject   144881468  CAAAAGGCACCGGATAATTCGGTGCCAGATACTACGACCAGAAGAGCTTCTCCGCGGTGT  144881409
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| |||||||||||||||||||||||||||||||
Subject   144881408  TCCTTTCTTCGGCTCGGTAGAATTGTGCGGCATCAGATATG  144881368

Range 5: 352995067 to 352994967 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     |||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Subject   352995067  CAAAGGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCCGCAGTGT  352995008
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||||||||||||||||||| |||||||| ||||||
Subject   352995007  TCCTTTCTTTGGCTCGGTAGAATTGGGCGGCATCCGATATG  352994967

Range 6: 387528074 to 387528174 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject   387528074  CAAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCTGCAGTGT  387528133
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject   387528134  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  387528174

Range 7: 418614776 to 418614876 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
160.9 bits(177) 0.0 96/101(95%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject   418614776  CAAAAGGCAGCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCTGCAGTGT  418614835
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||||||||||||||||||| |||||||| ||||||
Subject   418614836  TCCTTTCTTTGGCTCGGTAGAATTGGGCGGCATCTGATATG  418614876

Range 8: 72154099 to 72154198 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
159.1 bits(175) 0.0 95/100(95%) 0/100(0%) +1/+1 
Query             2  AAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGTT  61
                     |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Subject    72154099  AAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCTGCAGTGTT  72154158
Query            62  CCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     |||||||| ||||||||||||||| |||||||| ||||||
Subject    72154159  CCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCTGATATG  72154198

Range 9: 111030715 to 111030813 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/+1 
Query             3  AAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGTTC  62
                     |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Subject   111030715  AAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCCGCAGTGTTC  111030774
Query            63  CTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||| ||||||||||||||| |||||||| ||||||
Subject   111030775  CTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  111030813

Range 10: 484723803 to 484723705 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
157.3 bits(173) 0.0 94/99(95%) 0/99(0%) +1/-1 
Query             3  AAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGTTC  62
                     |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Subject   484723803  AAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCCGCAGTGTTC  484723744
Query            63  CTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||| ||||||||||||||| |||||||| ||||||
Subject   484723743  CTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  484723705

Range 11: 46876399 to 46876299 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||
Subject    46876399  CAAAAGGCACCGGATGATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCCGCAGTGT  46876340
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     |||||||||||||| |||||||||| |||||||| ||||||
Subject    46876339  TCCTTTCTTTGGCTTGGTAGAATTGGGCGGCATCCGATATG  46876299

Range 12: 56706862 to 56706762 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Subject    56706862  CAAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCCGCAGTGT  56706803
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject    56706802  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCTGATATG  56706762

Range 13: 78241269 to 78241169 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||
Subject    78241269  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCCTATCCGCAGTGT  78241210
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject    78241209  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  78241169

Range 14: 100065309 to 100065409 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Subject   100065309  CAAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCCGCAGTGT  100065368
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject   100065369  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  100065409

Range 15: 125949339 to 125949239 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject   125949339  CAAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCTGCAGTGT  125949280
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| |||||| |||||||| |||||||| ||||||
Subject   125949279  TCCTTTCTTCGGCTCGATAGAATTGGGCGGCATCCGATATG  125949239

Range 16: 141196502 to 141196602 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Subject   141196502  CAAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCCGCAGTGT  141196561
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject   141196562  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  141196602

Range 17: 286348836 to 286348736 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| 
Subject   286348836  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCCGCAGTGC  286348777
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject   286348776  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  286348736

Range 18: 314466377 to 314466477 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||| ||||||| |||||||||||||||||||| ||||||||||| || ||||
Subject   314466377  CAAAAGGCACCAGATAATTTGGTGCCAGATACTGCGACCATAAGAGCTTATCCGCAGTGT  314466436
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     |||||||||||||||||||||| ||||||||||||||||||
Subject   314466437  TCCTTTCTTTGGCTCGGTAGAACTGTGCGGCATCAGATATG  314466477

Range 19: 405761424 to 405761324 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Subject   405761424  CAAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCCGCAGTGT  405761365
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject   405761364  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  405761324

Range 20: 415826998 to 415826898 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | ||||
Subject   415826998  CAAAAGGCACCAGATAATTCGGTGCAAGATACTGCGACCAGAAGAGCTTATCTACAGTGT  415826939
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| |||||||||||||||||| ||||||||||||
Subject   415826938  TCCTTTCTTCGGCTCGGTAGAATTGTGCTGCATCAGATATG  415826898

Range 21: 454159788 to 454159888 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Subject   454159788  CAAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCTGCAGTGT  454159847
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| | |||||| ||||||
Subject   454159848  TCCTTTCTTCGGCTCGGTAGAATTGGGTGGCATCTGATATG  454159888

Range 22: 465464958 to 465465058 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||
Subject   465464958  CAAAAGGCAACGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCCGCAGTGT  465465017
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject   465465018  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCCGATATG  465465058

Range 23: 476593099 to 476592999 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Subject   476593099  CAAAAGGCACCGGATAATTCGGTGCCACATACTGCGACCAGAAGAGCTTATCCGCAGTGT  476593040
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     |||||| |||||||||||||||||| |||||||| ||||||
Subject   476593039  TCCTTTATTTGGCTCGGTAGAATTGGGCGGCATCCGATATG  476592999

Range 24: 415914261 to 415914162 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
154.6 bits(170) 0.0 94/100(94%) 0/100(0%) +1/-1 
Query             2  AAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGTT  61
                     |||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||
Subject   415914261  AAAAGGCACCGGATAATTCGGTGCCAAATACTGCGACCAGAAGAGCTTATCCGCAGTGTT  415914202
Query            62  CCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     |||||||| ||||||||||||||| |||||||| ||||||
Subject   415914201  CCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCTGATATG  415914162

Range 25: 62705791 to 62705691 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||
Subject    62705791  CAAAAGGCACCGGATAATTCGGTGCCAGATACTACGACCAGAAGAGCTTATCCGCAGTGT  62705732
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||  |||||||| ||||||
Subject    62705731  TCCTTTCTTCGGCTCGGTAGAATTAGGCGGCATCCGATATG  62705691

Range 26: 63958604 to 63958504 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||| ||||
Subject    63958604  CAAAAGGCACCAGATAATTCGGTGCCAAATACTGTGACCAGAAGAGCTTATCTGCAGTGT  63958545
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||||||||||||| |||||||| ||||||
Subject    63958544  TCCTTTCTTCGGCTCGGTAGAATTGGGCGGCATCTGATATG  63958504

Range 27: 86296684 to 86296784 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     |||||||||||||||||||||||||||||||||  ||||||||||||||||| || ||||
Subject    86296684  CAAAAGGCACCGGATAATTCGGTGCCAGATACTATGACCAGAAGAGCTTATCCGCAGTGT  86296743
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||| ||||| |||||| ||||||||||||||||||
Subject    86296744  TCCTTTCTTCGGCTCAGTAGAAGTGTGCGGCATCAGATATG  86296784

Range 28: 104169244 to 104169144 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||
Subject   104169244  CAAAAGGCACCGGATAATTCGGTGCCAAATACTACGACCAGAAGAGCTTATCTGCGGTGT  104169185
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||  ||||||||||||||| |||||||| ||||||
Subject   104169184  TCCTTTCTGCGGCTCGGTAGAATTGGGCGGCATCTGATATG  104169144

Range 29: 124350723 to 124350823 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     |||||||||||||||||||||| ||||||||||||||||||||||| |||||  | ||||
Subject   124350723  CAAAAGGCACCGGATAATTCGGAGCCAGATACTGCGACCAGAAGAGATTATCCACAGTGT  124350782
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||||||||||||||||||| |||||||| ||||||
Subject   124350783  TCCTTTCTTTGGCTCGGTAGAATTGGGCGGCATCCGATATG  124350823

Range 30: 129135489 to 129135589 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  CAAAAGGCACCGGATAATTCGGTGCCAGATACTGCGACCAGAAGAGCTTATCTGCTGTGT  60
                     ||||||||||||||||||  ||||||| |||||||||||||||||||||||| || ||||
Subject   129135489  CAAAAGGCACCGGATAATCTGGTGCCAAATACTGCGACCAGAAGAGCTTATCCGCAGTGT  129135548
Query            61  TCCTTTCTTTGGCTCGGTAGAATTGTGCGGCATCAGATATG  101
                     ||||||||||||||||||||||||| |||||||| ||||||
Subject   129135549  TCCTTTCTTTGGCTCGGTAGAATTGGGCGGCATCCGATATG  129135589

Nucleotide Sequence (101 letters)

Query number:76
Query ID:Query_76
Definition line:zxx-076
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 4556.0 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19170475 to 19170575 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19170475  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCGCCCA  19170534
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19170535  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  19170575

Range 2: 314468668 to 314468768 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   314468668  ATGTGACGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCGCCCA  314468727
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   314468728  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  314468768

Range 3: 342183765 to 342183865 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   342183765  ATGTGACGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCGCCCA  342183824
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   342183825  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  342183865

Range 4: 144879210 to 144879110 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Subject   144879210  ATGTGACGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCATGCTCACCGCCCA  144879151
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   144879150  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  144879110

Range 5: 86298976 to 86299076 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     |||||  |||||||||||| |||||||||| |||||||||||||||||||||||| ||||
Subject    86298976  ATGTGATGTTGGGCATCTTTCTCACCATGGTGCCTCCGCACTCGGCGTGCTCACCGCCCA  86299035
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject    86299036  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  86299076

Range 6: 415824706 to 415824606 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
156.4 bits(172) 0.0 95/101(94%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||  ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||
Subject   415824706  ATGTAACGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGGTCACTGCCCA  415824647
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   415824646  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  415824606

Range 7: 147011600 to 147011500 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| |||| ||
Subject   147011600  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCACTCA  147011541
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     | ||||||||||||| |||||||||||||||||||||||||
Subject   147011540  CCACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  147011500

Range 8: 148075117 to 148075017 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||  |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Subject   148075117  ATGTAACGTTGGGCATCTTGCTCACCATAGCGCCACCGCACTCGGCGTGCTCGCCACCCA  148075058
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   148075057  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  148075017

Range 9: 338146522 to 338146622 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||  |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||
Subject   338146522  ATGTAACGTTGGGCATCTTGCTCACCATAGCGCCTCCGCACTCGGCGTGCTCGCCACTCA  338146581
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   338146582  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  338146622

Range 10: 387530381 to 387530481 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||
Subject   387530381  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCCCA  387530440
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   387530441  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  387530481

Range 11: 415911952 to 415911852 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
151.9 bits(167) 0.0 94/101(93%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||
Subject   415911952  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCCCA  415911893
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   415911892  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  415911852

Range 12: 442871035 to 442871134 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
150.1 bits(165) 0.0 93/100(93%) 0/100(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||
Subject   442871035  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCCCA  442871094
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCC  100
                     ||||||||||||||| |||||| |||||||||||||||||
Subject   442871095  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCC  442871134

Range 13: 426235645 to 426235546 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
148.3 bits(163) 0.0 94/101(93%) 1/101(1%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||
Subject   426235645  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCCCA  426235586
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   426235585  CTACCTTGGGCTTCACATTAAA-ATCTTCAGCCATAAGCCG  426235545

Range 14: 78238957 to 78238857 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| ||||||||||||||||||||||||| || | ||||||||||||||| |||||||
Subject    78238957  ATGTGACGTTGGGCATCTTGCTCACCATGGCACCCCGGCACTCGGCGTGCTCGCCACCCA  78238898
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||| | ||||||||||||||||||
Subject    78238897  CTACCTTGGGCTTCACATTATAAATCTTCAGCCATAAGCCG  78238857

Range 15: 124356918 to 124357018 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| || || ||||||||||||||||| || | ||
Subject   124356918  ATGTGACGTTGGGCATCTTGCTCACCATAGCACCCCCGCACTCGGCGTGCTCGCCGCTCA  124356977
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   124356978  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  124357018

Range 16: 138413403 to 138413503 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||  || | ||
Subject   138413403  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTTGCCGCTCA  138413462
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   138413463  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  138413503

Range 17: 141199777 to 141199877 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| || || ||||||||||||||||| || ||||
Subject   141199777  ATGTGACGTTGGGCATCTTGCTCACCATAGCACCCCCGCACTCGGCGTGCTCGCCGCCCA  141199836
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   141199837  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  141199877

Range 18: 158844484 to 158844384 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||| ||||| || | ||
Subject   158844484  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCATGCTCGCCGCTCA  158844425
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   158844424  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  158844384

Range 19: 162938459 to 162938559 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||
Subject   162938459  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCCCA  162938518
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||| ||||||||||
Subject   162938519  CTACCTTGGGCTTCACATTAAAAATCTTCAACCATAAGCCG  162938559

Range 20: 208945295 to 208945195 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||||
Subject   208945295  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCCCA  208945236
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| ||||||||||||| |||||||| ||
Subject   208945235  CTACCTTGGGCTTCACATTAAAGATCTTCCGCCATAAGTCG  208945195

Range 21: 276298427 to 276298327 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || ||| 
Subject   276298427  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCCCG  276298368
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   276298367  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  276298327

Range 22: 281601030 to 281600930 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| || || ||||||||||||||||| || ||||
Subject   281601030  ATGTGACGTTGGGCATCTTGCTCACCATAGCACCCCCGCACTCGGCGTGCTCGCCGCCCA  281600971
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   281600970  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  281600930

Range 23: 286346549 to 286346449 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| || | ||
Subject   286346549  ATGTGACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCTCA  286346490
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| ||||||||||||||||||| |||||
Subject   286346489  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATTAGCCG  286346449

Range 24: 379940598 to 379940698 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| || || ||||||||||||||||| |||||||
Subject   379940598  ATGTGACGTTGGGCATCTTGCTCACCATAGCACCCCCGCACTCGGCGTGCTCGCCACCCA  379940657
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||| ||||
Subject   379940658  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAGGCCG  379940698

Range 25: 394007624 to 394007724 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| || || ||||||||||||||||| || ||||
Subject   394007624  ATGTGACGTTGGGCATCTTGCTCACCATAGCACCCCCGCACTCGGCGTGCTCGCCGCCCA  394007683
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   394007684  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  394007724

Range 26: 406552123 to 406552223 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||  |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Subject   406552123  ATGTAACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCACCCA  406552182
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||| ||
Subject   406552183  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGTCG  406552223

Range 27: 444768372 to 444768272 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| |||||||||||||||||||||| || || ||||||||||||||||| || ||||
Subject   444768372  ATGTGACGTTGGGCATCTTGCTCACCATAGCACCCCCGCACTCGGCGTGCTCGCCGCCCA  444768313
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||| ||||||||||||||||||
Subject   444768312  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCCG  444768272

Range 28: 476590794 to 476590694 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
147.4 bits(162) 0.0 93/101(92%) 0/101(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| | |||||||||||||||||||| ||||| ||||||||||||||||| || | ||
Subject   476590794  ATGTGACATTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCTCA  476590735
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCCG  101
                     ||||||||||||||| |||||||||||||||||||||||||
Subject   476590734  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCCG  476590694

Range 29: 288700296 to 288700197 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/-1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||  |||||||||||||||||||||| ||||| |||||||||| |||||| |||||||
Subject   288700296  ATGTAACGTTGGGCATCTTGCTCACCATAGCGCCCCCGCACTCGGTGTGCTCGCCACCCA  288700237
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCC  100
                     ||||||||||||||| |||||| |||||||||||||||||
Subject   288700236  CTACCTTGGGCTTCACATTAAAAATCTTCAGCCATAAGCC  288700197

Range 30: 346674540 to 346674639 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
145.6 bits(160) 0.0 92/100(92%) 0/100(0%) +1/+1 
Query             1  ATGTGGCGTTGGGCATCTTGCTCACCATGGCGCCTCCGCACTCGGCGTGCTCACCACCCA  60
                     ||||| ||||||||||||| |||||||| ||||| ||||||||||||||||| || | ||
Subject   346674540  ATGTGACGTTGGGCATCTTACTCACCATAGCGCCCCCGCACTCGGCGTGCTCGCCGCTCA  346674599
Query            61  CTACCTTGGGCTTCAAATTAAAGATCTTCAGCCATAAGCC  100
                     ||||||||||||||| ||||||||||||||||||||||||
Subject   346674600  CTACCTTGGGCTTCACATTAAAGATCTTCAGCCATAAGCC  346674639

Nucleotide Sequence (101 letters)

Query number:77
Query ID:Query_77
Definition line:zxx-077
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 178.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 1

Range 1: 19217804 to 19217904 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  TTTTGACCACTTTGCTTTATTTAAATGGACATATGCTGTGTAAAATCTCGAATTTTTCCC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19217804  TTTTGACCACTTTGCTTTATTTAAATGGACATATGCTGTGTAAAATCTCGAATTTGTCCC  19217863
Query            61  ATCCATTTATTTTGATATAAGCGTGCATAAGAGTGCCAAAC  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19217864  ATCCATTTATTTTGATATAAGCGTGCATAAGAGTGCCAAAC  19217904

Nucleotide Sequence (101 letters)

Query number:78
Query ID:Query_78
Definition line:zxx-078
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5176.4 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19232677 to 19232777 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19232677  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  19232736
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19232737  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  19232777

Range 2: 13747018 to 13746918 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    13747018  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  13746959
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    13746958  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  13746918

Range 3: 23333996 to 23333896 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    23333996  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  23333937
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    23333936  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  23333896

Range 4: 25029457 to 25029357 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    25029457  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  25029398
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    25029397  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  25029357

Range 5: 25047894 to 25047994 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    25047894  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  25047953
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    25047954  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  25047994

Range 6: 26651791 to 26651891 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    26651791  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  26651850
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    26651851  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  26651891

Range 7: 26731436 to 26731536 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    26731436  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  26731495
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    26731496  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  26731536

Range 8: 29406534 to 29406434 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    29406534  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  29406475
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    29406474  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  29406434

Range 9: 30846876 to 30846976 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    30846876  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  30846935
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    30846936  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  30846976

Range 10: 37236298 to 37236198 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    37236298  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  37236239
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    37236238  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  37236198

Range 11: 54927465 to 54927565 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    54927465  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  54927524
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    54927525  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  54927565

Range 12: 70546243 to 70546343 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    70546243  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  70546302
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    70546303  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  70546343

Range 13: 119532879 to 119532779 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   119532879  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  119532820
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   119532819  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  119532779

Range 14: 325245623 to 325245523 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   325245623  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  325245564
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   325245563  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  325245523

Range 15: 487672942 to 487673042 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   487672942  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  487673001
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   487673002  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  487673042

Range 16: 501794217 to 501794117 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject   501794217  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  501794158
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   501794157  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  501794117

Range 17: 5440281 to 5440379 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
170.8 bits(188) 0.0 97/99(98%) 0/99(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject     5440281  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  5440340
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGAC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject     5440341  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGAC  5440379

Range 18: 14850002 to 14849904 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
170.8 bits(188) 0.0 97/99(98%) 0/99(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    14850002  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  14849943
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGAC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject    14849942  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGAC  14849904

Range 19: 37285852 to 37285754 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
170.8 bits(188) 0.0 97/99(98%) 0/99(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    37285852  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  37285793
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGAC  99
                     |||||||||||||||||||||||||||||||||||||||
Subject    37285792  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGAC  37285754

Range 20: 6115 to 6215 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject        6115  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  6174
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject        6175  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  6215

Range 21: 100930 to 101030 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject      100930  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  100989
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject      100990  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  101030

Range 22: 195760 to 195860 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject      195760  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  195819
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject      195820  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  195860

Range 23: 290581 to 290681 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject      290581  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  290640
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject      290641  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  290681

Range 24: 385404 to 385504 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject      385404  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  385463
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject      385464  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  385504

Range 25: 480235 to 480335 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject      480235  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  480294
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject      480295  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  480335

Range 26: 575081 to 575181 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject      575081  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  575140
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject      575141  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  575181

Range 27: 3939542 to 3939642 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||
Subject     3939542  ATACATGCAATGAAAGAGCTTACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  3939601
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     3939602  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  3939642

Range 28: 4009145 to 4009245 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject     4009145  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTATTACT  4009204
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject     4009205  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  4009245

Range 29: 4901338 to 4901238 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject     4901338  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  4901279
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject     4901278  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  4901238

Range 30: 9017069 to 9017169 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  ATACATGCAATAAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTAATACT  60
                     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Subject     9017069  ATACATGCAATGAAAGAGCTGACCTATATAGAGAGACTTAATGACAGAAGTAGTACTACT  9017128
Query            61  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGACTT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject     9017129  TACAGACAGTAGCAAGTGATCGTTGTTTTATCGAGGGCCTT  9017169

Nucleotide Sequence (101 letters)

Query number:79
Query ID:Query_79
Definition line:zxx-079
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 5006.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 19241926 to 19242026 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19241926  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATAACTC  19241985
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19241986  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  19242026

Range 2: 3950889 to 3950789 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||
Subject     3950889  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCATCGTTGTCGATATATATAACTC  3950830
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     3950829  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  3950789

Range 3: 12688492 to 12688392 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||
Subject    12688492  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCATCGTTGTCGATATATATAACTC  12688433
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    12688432  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  12688392

Range 4: 32006806 to 32006906 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Subject    32006806  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCATCGTTGTCGATATATATAACTC  32006865
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    32006866  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  32006906

Range 5: 342633951 to 342634051 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Subject   342633951  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCATCGTTGTCGATATATATAACTC  342634010
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   342634011  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  342634051

Range 6: 483392337 to 483392237 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||
Subject   483392337  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCATCGTTGTCGATATATATAACTC  483392278
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   483392277  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  483392237

Range 7: 493049213 to 493049113 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Subject   493049213  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCATCGTTGTCGATATATATAACTC  493049154
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject   493049153  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  493049113

Range 8: 497258823 to 497258723 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
169.9 bits(187) 0.0 98/101(97%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||
Subject   497258823  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCATCGTTGTCGATATATATAACTC  497258764
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   497258763  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  497258723

Range 9: 3715699 to 3715799 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject     3715699  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  3715758
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     3715759  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  3715799

Range 10: 7309756 to 7309656 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject     7309756  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  7309697
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject     7309696  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  7309656

Range 11: 8715296 to 8715396 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject     8715296  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  8715355
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject     8715356  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  8715396

Range 12: 10375774 to 10375874 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    10375774  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  10375833
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    10375834  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  10375874

Range 13: 12815239 to 12815139 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    12815239  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  12815180
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    12815179  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  12815139

Range 14: 13743839 to 13743939 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject    13743839  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  13743898
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    13743899  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  13743939

Range 15: 20784662 to 20784562 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    20784662  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  20784603
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    20784602  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  20784562

Range 16: 22614012 to 22613912 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject    22614012  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  22613953
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    22613952  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  22613912

Range 17: 24225739 to 24225639 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    24225739  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  24225680
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    24225679  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  24225639

Range 18: 25026290 to 25026390 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject    25026290  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  25026349
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    25026350  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  25026390

Range 19: 25051084 to 25050984 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject    25051084  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  25051025
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    25051024  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  25050984

Range 20: 25305099 to 25304999 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject    25305099  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  25305040
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    25305039  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  25304999

Range 21: 25325133 to 25325033 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject    25325133  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  25325074
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    25325073  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  25325033

Range 22: 26655033 to 26654933 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject    26655033  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  26654974
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    26654973  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  26654933

Range 23: 26948608 to 26948708 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    26948608  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  26948667
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    26948668  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  26948708

Range 24: 28955474 to 28955574 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    28955474  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  28955533
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    28955534  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  28955574

Range 25: 29403357 to 29403457 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||
Subject    29403357  CCTCCCCGATAACATTATTTTCCCGTGTATGTATGTCGTCGTTGTCGATATATATAACTC  29403416
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    29403417  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  29403457

Range 26: 33547299 to 33547399 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    33547299  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  33547358
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    33547359  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  33547399

Range 27: 33694901 to 33695001 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/+1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    33694901  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  33694960
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    33694961  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  33695001

Range 28: 34049557 to 34049457 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    34049557  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  34049498
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    34049497  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  34049457

Range 29: 34069168 to 34069068 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    34069168  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  34069109
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    34069108  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  34069068

Range 30: 36356587 to 36356487 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
165.4 bits(182) 0.0 97/101(96%) 0/101(0%) +1/-1 
Query             1  CCTCCCCGATAACATTATTTTCCCATGTATGTATATCATCGTTGTCGATATATATGACTC  60
                     |||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Subject    36356587  CCTCCCCGATAACATTATTTTCCCATGTATGTATGTCGTCGTTGTCGATATATATAACTC  36356528
Query            61  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATGTAT  101
                     ||||||||||||||||||||||||||||||||||||| |||
Subject    36356527  CCTCCCAGATAACTTCGACATGATGGACGGTCGATATTTAT  36356487

Nucleotide Sequence (101 letters)

Query number:80
Query ID:Query_80
Definition line:zxx-080
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
183.4 5306.2 100% 2.247e-45 100% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 30

Range 1: 78374225 to 78374125 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
183.4 bits(202) 0.0 101/101(100%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Subject    78374225  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  78374166
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    78374165  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  78374125

Range 2: 18068163 to 18068263 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject    18068163  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  18068222
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    18068223  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  18068263

Range 3: 19243806 to 19243906 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19243806  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATCCCAG  19243865
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19243866  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  19243906

Range 4: 26732737 to 26732637 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject    26732737  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  26732678
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    26732677  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  26732637

Range 5: 29405233 to 29405333 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject    29405233  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  29405292
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    29405293  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  29405333

Range 6: 30848178 to 30848078 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject    30848178  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  30848119
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    30848118  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  30848078

Range 7: 54875687 to 54875787 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject    54875687  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  54875746
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    54875747  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  54875787

Range 8: 60389206 to 60389106 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject    60389206  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  60389147
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    60389146  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  60389106

Range 9: 103823045 to 103823145 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject   103823045  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  103823104
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   103823105  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  103823145

Range 10: 119531591 to 119531691 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject   119531591  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  119531650
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   119531651  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  119531691

Range 11: 126565481 to 126565581 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject   126565481  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  126565540
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   126565541  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  126565581

Range 12: 372144193 to 372144093 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject   372144193  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  372144134
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   372144133  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  372144093

Range 13: 483390410 to 483390310 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Subject   483390410  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  483390351
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject   483390350  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  483390310

Range 14: 18499877 to 18499778 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/-1 
Query             2  TGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAGA  61
                     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Subject    18499877  TGTTGGCTCTGTTTTACCTCCTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAGA  18499818
Query            62  AGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    18499817  AGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  18499778

Range 15: 36588788 to 36588887 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/+1 
Query             2  TGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAGA  61
                     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Subject    36588788  TGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAGA  36588847
Query            62  AGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    36588848  AGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  36588887

Range 16: 48273794 to 48273695 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/-1 
Query             2  TGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAGA  61
                     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Subject    48273794  TGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAGA  48273735
Query            62  AGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    48273734  AGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  48273695

Range 17: 70547544 to 70547445 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
177.1 bits(195) 0.0 99/100(99%) 0/100(0%) +1/-1 
Query             2  TGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAGA  61
                     ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Subject    70547544  TGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAGA  70547485
Query            62  AGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     ||||||||||||||||||||||||||||||||||||||||
Subject    70547484  AGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  70547445

Range 18: 3717577 to 3717677 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Subject     3717577  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCAGATTCCAG  3717636
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     3717637  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  3717677

Range 19: 3940844 to 3940744 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Subject     3940844  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTCCCGGCCGATTCCAG  3940785
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     3940784  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  3940744

Range 20: 4526422 to 4526322 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Subject     4526422  CTGTTGGCTCTGTTTTACCTCCTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  4526363
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     4526362  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  4526322

Range 21: 8717179 to 8717279 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Subject     8717179  CTGTTGGCTCTGTTTTACCTCCTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  8717238
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject     8717239  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  8717279

Range 22: 10314437 to 10314337 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Subject    10314437  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTGCCACTGCCGGCCGATTCCAG  10314378
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    10314377  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  10314337

Range 23: 11778115 to 11778015 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Subject    11778115  CTGTTGGCTCTGTTTTACCTCCTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  11778056
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    11778055  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  11778015

Range 24: 14848700 to 14848800 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Subject    14848700  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCTG  14848759
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    14848760  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  14848800

Range 25: 22612135 to 22612035 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Subject    22612135  CTGTTGGCTCTGTTTTACCTACTGAACCCGACGCAACCTACCACTGCCGGCCGATTCCAG  22612076
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    22612075  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  22612035

Range 26: 23332706 to 23332806 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Subject    23332706  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCAGATTCCAG  23332765
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    23332766  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  23332806

Range 27: 24221948 to 24221848 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Subject    24221948  CTGTTGGCTCTGTTTTACCTCCTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  24221889
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    24221888  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  24221848

Range 28: 25028168 to 25028268 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Subject    25028168  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCTG  25028227
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    25028228  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  25028268

Range 29: 25049208 to 25049108 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/-1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Subject    25049208  CTGTTGGCTCTGTTTTACCTACTGAACACGGCGCAACCTACCACTGCCGGCCGATTCCAG  25049149
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    25049148  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  25049108

Range 30: 26950486 to 26950586 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
174.4 bits(192) 0.0 99/101(98%) 0/101(0%) +1/+1 
Query             1  CTGTTGGCTCTGTTTTACCTACTGAACCCGGCACAACCTACCACTGCCGGCCGATTCCAG  60
                     |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Subject    26950486  CTGTTGGCTCTGTTTTACCTCCTGAACCCGGCGCAACCTACCACTGCCGGCCGATTCCAG  26950545
Query            61  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    26950546  AAGGATATGCTAGGGTGATGGTGGATGAAATAACGGAGGGA  26950586

Nucleotide Sequence (101 letters)

Query number:81
Query ID:Query_81
Definition line:zxx-081
Length:101
Program:BLASTN 2.12.0+
Database:./db/nucleotide/Kariega.genome_chr6D

Graphic Summary

Distribution of 81 Blast Hits on the Query Sequence
Mouse-over to show defline and scores, click to show alignments
Color key for alignment scores
<40
40–50
50–80
80–200
200≤
query:
11
22
33
44
55
66
77
88
99
 
101

Descriptions

Sequences producing significant alignments:
Description Max score Total score Query cover E value Ident Accession
178.9 178.9 100% 9.556e-44 99% chr6D_Kariega

Alignments

Descriptions

Kariega chr6D chromosome

Sequence ID: chr6D_Kariega Length: 507261758 Number of Matches: 1

Range 1: 19249627 to 19249727 JBrowse DownloadSequence

ScoreExpectIdentitiesGapsStrand
178.9 bits(197) 0.0 100/101(99%) 0/101(0%) +1/+1 
Query             1  AGGCGCCATGGTGCTAGCCCCAACGTATGCCGCTGCTGTGAAGGAGCGTCAACGATGGCG  60
                     ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Subject    19249627  AGGCGCCATGGTGCTAGCCCCAACGTATGCCGCTGCTGTGAAGGAGCGTCAACGACGGCG  19249686
Query            61  TTGCTGCAATACAAGGCCGCTCCAACGGAGGGACAAGGAAT  101
                     |||||||||||||||||||||||||||||||||||||||||
Subject    19249687  TTGCTGCAATACAAGGCCGCTCCAACGGAGGGACAAGGAAT  19249727